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Protein kinase inhibitors 1

Cat No.:V33092 Purity: ≥98%
Protein kinase inhibitor 1 is a new HIPK2 inhibitor (antagonist) with IC50 of 74 nM and Kd of 9.5 nM.
Protein kinase inhibitors 1
Protein kinase inhibitors 1 Chemical Structure CAS No.: 1365986-44-2
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
100mg
Other Sizes

Other Forms of Protein kinase inhibitors 1:

  • Protein kinase inhibitor 1 hydrochloride
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Protein kinase inhibitor 1 is a new HIPK2 inhibitor (antagonist) with IC50 of 74 nM and Kd of 9.5 nM.
Protein kinase inhibitors 1 (CAS 1365986-44-2) is a novel small-molecule inhibitor of homeodomain-interacting protein kinase 2 (HIPK2). It has a molecular formula of C₁₈H₁₇N₅O₃S and a molecular weight of 383.42. The compound is a potent and selective HIPK2 inhibitor with an IC₅₀ of 74 nM and a Kd of 9.5 nM. It is a valuable tool for studying the role of HIPK2 in various cellular processes, including DNA damage response, apoptosis, and transcriptional regulation. The compound is also referred to as Protein kinase inhibitor I.
Biological Activity I Assay Protocols (From Reference)
Targets
Protein kinase inhibitors 1 targets homeodomain-interacting protein kinase 2 (HIPK2). HIPK2 is a serine/threonine kinase that plays critical roles in DNA damage response, apoptosis, transcription regulation, and development. The compound has high affinity for HIPK2, with an IC₅₀ of 74 nM and a Kd of 9.5 nM. It is a potent and selective inhibitor. The compound may also inhibit other kinases at higher concentrations, but its selectivity for HIPK2 is its defining feature.
ln Vitro
In vitro, protein kinase inhibitors 1 potently inhibits HIPK2 kinase activity with an IC₅₀ of 74 nM and a Kd of 9.5 nM. The compound's high affinity for HIPK2 makes it a valuable tool for studying HIPK2-mediated signaling pathways. Inhibition of HIPK2 by this compound can be used to investigate the role of HIPK2 in DNA damage response, p53 activation, apoptosis, and transcriptional regulation. No other in vitro activities have been reported for this compound.
ln Vivo
In vivo activity of protein kinase inhibitors 1 has not been extensively characterized in animal models. No specific in vivo efficacy studies have been reported for this compound. The compound is primarily used as a research tool for in vitro studies of HIPK2 function. Future studies may involve administration of the compound in animal models to evaluate its effects on HIPK2-mediated processes in vivo. Currently, no in vivo data are available.
Enzyme Assay
In vitro enzyme/receptor binding assays for protein kinase inhibitors 1 typically employ purified recombinant HIPK2 enzyme. The compound is incubated with the kinase, ATP, and a suitable peptide substrate in kinase buffer. Kinase activity is measured by incorporation of ³²P-ATP into the substrate or by using a luminescent kinase assay (e.g., ADP-Glo). IC₅₀ values are determined by measuring kinase activity at various inhibitor concentrations and fitting the data to a dose-response curve. Kd values are determined by surface plasmon resonance (SPR) or isothermal titration calorimetry (ITC).
Cell Assay
In vitro cell-based assays for protein kinase inhibitors 1 typically employ cell lines that express HIPK2, such as cancer cell lines or cells treated with DNA-damaging agents that activate HIPK2. Cells are treated with various concentrations of the compound (typically 0.1-10 μM) for various time periods. HIPK2 activity is assessed by measuring the phosphorylation of downstream substrates (e.g., p53 at Ser46) by Western blot. Apoptosis is evaluated by measuring caspase activation, Annexin V staining, or PARP cleavage. Cell viability is assessed by MTT or CCK-8 assays.
Animal Protocol
In vivo animal studies have not been reported for protein kinase inhibitors 1. No animal models have been used to evaluate its pharmacokinetics, efficacy, or toxicology. The compound is primarily used as a research tool for in vitro studies. Future studies may involve administration of the compound in rodent models to evaluate its effects on HIPK2-mediated processes in vivo. Currently, no in vivo data are available.
ADME/Pharmacokinetics
Pharmacokinetic (PK) properties of protein kinase inhibitors 1 have not been characterized. No absorption, distribution, metabolism, or excretion studies have been conducted for this compound. As a small molecule with a molecular weight of 383.42, the compound may have reasonable oral bioavailability and cell permeability. However, these properties have not been experimentally determined. Further studies are needed to evaluate the compound's PK profile.
Toxicity/Toxicokinetics
The toxicity profile of protein kinase inhibitors 1 has not been characterized in preclinical studies. No acute toxicity, genotoxicity, or chronic toxicity studies have been reported. The compound is intended for research use only and is not approved for human therapeutic applications. Standard safety precautions should be followed when handling this compound.
References

[1]. High-throughput kinase profiling: a more efficient approach toward the discovery of new kinaseinhibitors. Chem Biol. 2011 Jul 29;18(7):868-79.

Additional Infomation
Protein kinase inhibitors 1 is a research-grade small-molecule inhibitor of HIPK2. It has a molecular formula of C₁₈H₁₇N₅O₃S and a molecular weight of 383.42. The compound is a potent HIPK2 inhibitor with an IC₅₀ of 74 nM and a Kd of 9.5 nM. It is not an approved therapeutic drug and has no clinical trial history. The compound is supplied as a solid powder and should be stored at -20°C. It is soluble in DMSO. The compound is intended for research use only and not for human or veterinary use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C18H18CLN5O3S
Molecular Weight
419.885221004486
Exact Mass
383.105
CAS #
1365986-44-2
Related CAS #
Protein kinase inhibitor 1 hydrochloride;2321337-71-5
PubChem CID
132274054
Appearance
Light yellow to yellow solid powder
LogP
0.4
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
3
Heavy Atom Count
27
Complexity
754
Defined Atom Stereocenter Count
0
SMILES
Cl.S1C(NC(/C/1=C/C1=CNC(C(=C1)C1=CN=C(C=C1)N1CCNCC1)=O)=O)=O
InChi Key
YHUKWWWCNSTFHL-RIYZIHGNSA-N
InChi Code
InChI=1S/C18H17N5O3S/c24-16-13(7-11(9-21-16)8-14-17(25)22-18(26)27-14)12-1-2-15(20-10-12)23-5-3-19-4-6-23/h1-2,7-10,19H,3-6H2,(H,21,24)(H,22,25,26)/b14-8+
Chemical Name
(5E)-5-[[6-oxo-5-(6-piperazin-1-ylpyridin-3-yl)-1H-pyridin-3-yl]methylidene]-1,3-thiazolidine-2,4-dione
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3816 mL 11.9079 mL 23.8158 mL
5 mM 0.4763 mL 2.3816 mL 4.7632 mL
10 mM 0.2382 mL 1.1908 mL 2.3816 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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