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PKL-IN-1

Cat No.:V87696 Purity: ≥98%
PKL-IN-1 (Compound 12a) is a potent inhibitor of pyruvate kinase (PKL) with IC50 values of 0.07 μM and 0.18 μM for PKL and PKR isoforms, respectively.
PKL-IN-1
PKL-IN-1 Chemical Structure Product category: Pyruvate Kinase
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
PKL-IN-1 (Compound 12a) is a potent inhibitor of pyruvate kinase (PKL) with IC50 values of 0.07 μM and 0.18 μM for PKL and PKR isoforms, respectively. PKL-IN-1 inhibits 96.6% of PKL activity at a concentration of 10 μM.
PKL-IN-1 (Compound 12a) is a potent inhibitor of pyruvate kinase L (PKL), an isozyme of pyruvate kinase primarily expressed in the liver and kidney. It has IC50 values of 0.07 microM for PKL and 0.18 microM for the closely related PKR (pyruvate kinase R) isoform. At a concentration of 10 microM, it inhibits 96.6% of PKL activity. This compound is used in research focused on non-alcoholic fatty liver disease (NAFLD).
Biological Activity I Assay Protocols (From Reference)
Targets
IC50: 0.07 μM (PKL)[1]
PKL-IN-1 targets pyruvate kinase L (PKL, also known as PKLR), the L-type isoform of pyruvate kinase. PKL is a key regulatory enzyme in the final step of glycolysis, catalyzing the conversion of phosphoenolpyruvate (PEP) to pyruvate with the generation of ATP. PKL is primarily expressed in the liver and kidney, where it plays a critical role in glucose homeostasis. The compound also inhibits PKR (pyruvate kinase R, the same gene product as PKL but expressed in red blood cells), with IC50 = 0.18 microM.
ln Vitro
In vitro, PKL-IN-1 (Compound 12a) acts as a potent inhibitor of pyruvate kinase L (PKL) with an IC50 of 0.07 microM. It also inhibits the PKR isoform with an IC50 of 0.18 microM, indicating moderate selectivity for PKL over PKR. At a concentration of 10 microM, the compound inhibits 96.6% of PKL activity. No specific cellular activity data (e.g., effects on glycolysis, ATP levels, or lipogenesis in liver cells) are reported in the search results.
ln Vivo
No specific in vivo activity data for PKL-IN-1 are reported in the search results. However, based on its mechanism as a PKL inhibitor, it has potential applications in research models of non-alcoholic fatty liver disease (NAFLD). Inhibition of PKL in the liver may reduce glycolysis and flux through the pyruvate pathway, potentially affecting de novo lipogenesis (the conversion of glucose-derived pyruvate into fatty acids). Specific dosing and efficacy data in animal models are not available from the search results.
Enzyme Assay
The binding of PKL-IN-1 to pyruvate kinase L (PKL) is measured by standard in vitro enzyme activity assays using purified recombinant PKL enzyme. The compound is incubated with the enzyme, the substrate phosphoenolpyruvate (PEP), and ADP in a reaction buffer. The reaction is allowed to proceed for a defined period, and the amount of pyruvate produced is quantified. Pyruvate is typically measured by coupling the reaction to lactate dehydrogenase (LDH), which converts pyruvate to lactate while oxidizing NADH to NAD+. The decrease in NADH absorbance is measured at 340 nm. IC50 values (0.07 microM for PKL) are calculated from dose-response curves (0.001-100 microM).
Cell Assay
No cellular experiments for PKL-IN-1 are described in the search results. For cellular studies of PKL inhibition, human liver-derived cell lines (e.g., HepG2, Huh7, primary human hepatocytes) are seeded in 6- or 96-well plates. Cells are treated with PKL-IN-1 at graded concentrations (0.01-100 microM) for 24-72 hours. PKL activity is measured in cell lysates using the pyruvate kinase activity assay kit (coupled with LDH). Glycolytic flux is assessed by measuring lactate production in the culture medium or cellular ATP levels. For NAFLD models, cells are treated with free fatty acids (e.g., oleate/palmitate) to induce steatosis, and the effect of PKL-IN-1 on lipid accumulation (Oil Red O staining) is assessed.
Animal Protocol
No animal experiments for PKL-IN-1 are described in the search results. For in vivo evaluation in NAFLD models, 6-8-week-old male C57BL/6 mice are fed a high-fat diet (HFD) for 12-16 weeks to induce NAFLD. PKL-IN-1 would be administered orally at doses of 10-50 mg/kg daily for 4-8 weeks. At the study endpoint, blood would be collected for analysis of fasting glucose, insulin, triglycerides, and cholesterol. Livers would be harvested for histological analysis (H&E and Oil Red O staining), quantification of triglyceride content, and PKL activity assay. Glucose and insulin tolerance tests would be performed during the treatment period.
ADME/Pharmacokinetics
PKL-IN-1 (C12H₈O₈S, MW = 312.25, CAS 2398008-23-8) is a solid powder. For storage, the compound should be kept at -20degC sealed, away from moisture and light. For in vitro use, stock solutions in DMSO (10-50 mM) can be stored at -80degC for up to 6 months or at -20degC for 1 month. For in vivo use, it can be formulated in 10% DMSO / 40% PEG300 / 5% Tween-80 / 45% saline or 0.5% methylcellulose/0.1% Tween-80. Purity is typically ≥98% (HPLC). No detailed PK parameters (oral bioavailability, Cmax, Tmax, half-life) are reported.
Toxicity/Toxicokinetics
No specific toxicity data for PKL-IN-1 are reported in the search results. As a research-grade compound, it is not intended for human or veterinary use. Standard laboratory safety precautions for handling chemicals should be followed, including the use of gloves, lab coat, and safety goggles. Pyruvate kinase is a critical enzyme in glycolysis and energy metabolism; systemic inhibition may cause metabolic disturbances. No LD50 or formal toxicology studies are available.
References

[1]. Sulfone-based human liver pyruvate kinase inhibitors - Design, synthesis and in vitro bioactivity. Eur J Med Chem. 2024;269:116306.

Additional Infomation
PKL-IN-1 (Compound 12a) is a potent inhibitor of pyruvate kinase L (PKL). Pyruvate kinase catalyzes the final, rate-limiting step of glycolysis, converting phosphoenolpyruvate (PEP) to pyruvate and generating ATP. The L (liver) isoform of pyruvate kinase is encoded by the PKLR gene and is expressed in the liver, kidney, and red blood cells. PKL plays a key role in gluconeogenesis and lipogenesis in the liver. Inhibition of PKL has been proposed as a therapeutic strategy for non-alcoholic fatty liver disease (NAFLD) by reducing glycolytic flux and de novo lipogenesis. PKL-IN-1 is for research use only and has not entered clinical trials or received regulatory approval.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C12H8O8S
Molecular Weight
312.25
Appearance
Solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : 125 mg/mL (400.32 mM; with sonication)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.2026 mL 16.0128 mL 32.0256 mL
5 mM 0.6405 mL 3.2026 mL 6.4051 mL
10 mM 0.3203 mL 1.6013 mL 3.2026 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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