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MG degrader 1

MG degrader 1
MG degrader 1 Chemical Structure Product category: Others 17
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
MG degrader 1 (Compd E14) is a PROTAC degrader of IKZF3, GSPT1, and GSPT2 with an EC50 value of 1.385 nM in MM.1S cells.
MG degrader 1 (Compound E14) is a novel molecular glue degrader that potently and selectively induces the degradation of the zinc finger transcription factors IKZF1 (Ikaros) and IKZF3 (Aiolos), as well as the translation termination factors GSPT1 and GSPT2. It has a molecular formula of C31H37N5O7 and a molecular weight of 591.7 g/mol. The compound achieves its activity by co-opting the E3 ubiquitin ligase Cereblon (CRBN). By inducing proximity between CRBN and its neo-substrates, MG degrader 1 marks them for ubiquitination and subsequent proteasomal degradation. This mechanism of action holds significant therapeutic potential, particularly in oncology.
Biological Activity I Assay Protocols (From Reference)
Targets
MG degrader 1 targets the zinc finger transcription factors IKZF1 (Ikaros) and IKZF3 (Aiolos), as well as the translation termination factors GSPT1 and GSPT2. As a molecular glue degrader, it acts by co-opting the E3 ubiquitin ligase Cereblon (CRBN). The compound induces proximity between CRBN and its neo-substrates, leading to their ubiquitination and subsequent degradation by the proteasome.
ln Vitro
MG degrader 1 shows potent in vitro activity as a degrader of IKZF3, GSPT1, and GSPT2 with an EC50 value of 1.385 nM in MM.1S cells. The compound demonstrates selective degradation of its target proteins through the ubiquitin-proteasome pathway. In cellular models, MG degrader 1 effectively reduces the levels of IKZF1, IKZF3, GSPT1, and GSPT2, leading to antiproliferative effects in cancer cell lines.
ln Vivo
In vivo activity of MG degrader 1 has been suggested based on its potent in vitro degradation activity and its mechanism of action as a molecular glue degrader. The compound's ability to selectively degrade oncogenic proteins positions it as a promising candidate for cancer treatments targeting specific pathways involved in tumorigenesis. However, detailed in vivo efficacy data have not been extensively reported in the available literature.
Enzyme Assay
Non-cell-based binding assays for MG degrader 1 typically involve measuring the affinity of the compound for Cereblon (CRBN) and its neo-substrates. A standard protocol includes surface plasmon resonance (SPR) or fluorescence polarization (FP) using purified CRBN protein and target proteins. The compound's ability to induce ternary complex formation between CRBN and its neo-substrates can be assessed using biochemical binding assays. The degradation activity is typically evaluated in cell-based systems.
Cell Assay
Cellular assays for MG degrader 1 typically involve multiple myeloma cell lines such as MM.1S cells. A representative protocol includes culturing cells in appropriate medium, treating with MG degrader 1 at various concentrations (0.001–100 nM) for 4–24 hours, and measuring target protein levels (IKZF1, IKZF3, GSPT1, GSPT2) by Western blot to determine the DC50 (half-maximal degradation concentration). Cell viability is assessed using CellTiter-Glo assays to evaluate antiproliferative effects.
Animal Protocol
In vivo animal studies with MG degrader 1 are typically conducted in xenograft mouse models of multiple myeloma or other cancers dependent on IKZF1, IKZF3, GSPT1, or GSPT2. A typical protocol involves subcutaneous implantation of tumor cells in immunodeficient mice, allowing tumors to reach a certain size, administering MG degrader 1 via oral gavage or intraperitoneal injection at doses determined from pharmacokinetic studies, monitoring tumor growth and body weight, and harvesting tumors for analysis of target protein degradation by Western blot.
ADME/Pharmacokinetics
Pharmacokinetic properties of MG degrader 1 have not been extensively reported in the available literature. As a molecular glue degrader with a molecular weight of 591.7 g/mol, it is expected to have reasonable oral bioavailability and tissue distribution. The compound is typically stored as a powder at -20°C for up to 3 years and is soluble in DMSO. Further PK studies are needed to fully characterize its absorption, distribution, metabolism, and excretion profile.
Toxicity/Toxicokinetics
As a research compound, MG degrader 1 is not intended for human therapeutic use, and comprehensive toxicological data are limited to preclinical studies. Standard safety assessments would include cytotoxicity screening, hERG channel inhibition testing, and preliminary toxicology studies in animal models to determine maximum tolerated dose and identify potential target organs of toxicity. The compound is for research use only and not for human or veterinary use.
References

[1].Direct-to-biology, automated, nano-scale synthesis, and phenotypic screening-enabled E3 ligase modulator discovery. Nat Commun. 2023 Dec 19;14(1):8437.

Additional Infomation
MG degrader 1 (Compound E14) is a novel molecular glue degrader that targets IKZF1, IKZF3, GSPT1, and GSPT2 through Cereblon-mediated degradation. The compound is referenced in the primary literature (PubMed ID: 38114468) for its potent degradation activity with an EC50 of 1.385 nM in MM.1S cells. MG degrader 1 represents a promising approach for cancer therapy by selectively degrading oncogenic proteins through the ubiquitin-proteasome pathway.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C31H37N5O7
Molecular Weight
591.65
Appearance
Light yellow to yellow solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO :~125 mg/mL (~211.27 mM; with sonication)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.6902 mL 8.4509 mL 16.9019 mL
5 mM 0.3380 mL 1.6902 mL 3.3804 mL
10 mM 0.1690 mL 0.8451 mL 1.6902 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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