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1-Methylinosine-d3 (N1-Methylinosine-d3)

Cat No.:V77330 Purity: ≥98%
1-Methylinosine-d3 is the deuterated form of 1-Methylinosine.
1-Methylinosine-d3 (N1-Methylinosine-d3)
1-Methylinosine-d3 (N1-Methylinosine-d3) Chemical Structure Product category: Endogenous Metabolite
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes

Other Forms of 1-Methylinosine-d3 (N1-Methylinosine-d3):

  • 1-Methylinosine
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
1-Methylinosine-d3 is the deuterated form of 1-Methylinosine. 1-Methylinosine is a modified nucleotide located at position 37 of the anticodon of eukaryotic tRNA at the 3' end of the tRNA.
1-Methylinosine-d3 (N1-Methylinosine-d3) is a stable isotope-labeled (deuterium, d3) form of 1-Methylinosine, a modified nucleoside. It is intended for use as an internal standard in LC-MS/MS assays to quantify levels of 1-Methylinosine in biological samples.
Biological Activity I Assay Protocols (From Reference)
Targets
As an internal standard, the compound does not have a biological target. However, the non-labeled parent compound, 1-Methylinosine, is a modified nucleotide found at position 37 in tRNA (3' to the anticodon) of eukaryotic tRNA. It is a biomarker for RNA turnover and is found at higher concentrations in the urine of patients with certain cancers, such as breast cancer.
ln Vitro
Drug compounds have included stable heavy isotopes of carbon, hydrogen, and other elements, mostly as tracers for quantification throughout the drug development process. Due to its potential to alter the pharmacokinetic and metabolic characteristics of medications, deuteration has drawn attention[1].
The compound itself has no biological activity; it is a stable isotope-labeled internal standard. The non-labeled 1-Methylinosine is a naturally occurring modified nucleoside. Its levels in urine are studied as a biomarker for cancer diagnosis. The d3-labeled standard mimics the behavior of the natural compound in analytical systems.
Enzyme Assay
A standard LC-MS/MS protocol is used. A known amount of the d3-labeled internal standard is spiked into biological samples (e.g., plasma, urine). After protein precipitation and solid-phase extraction, the sample is injected onto a C18 column. The analyte and internal standard are detected in MRM mode, and the peak area ratio is used for precise quantification.
Cell Assay
The compound is not used in cell viability assays. Instead, it is added as an internal standard to cellular extracts. For instance, cancer cells can be cultured, and the media can be collected. The d3-internal standard is spiked into the media before LC-MS/MS analysis to quantify the amount of 1-Methylinosine secreted by the cells.
Animal Protocol
The internal standard is not administered in animal studies. In a pharmacokinetic or biomarker study, urine or blood samples are collected from animals. The d3-internal standard is spiked into these samples to accurately measure the concentration of the endogenous nucleoside 1-Methylinosine. This helps study metabolic flux or validate biomarker changes.
ADME/Pharmacokinetics
1-Methylinosine-d3 has a molecular weight of 285.27 and is a solid white to off-white powder. It is soluble in DMSO and water. It is stable when stored at -20degC in a sealed container away from moisture and light. As an analytical standard, it co-elutes with the non-labeled analyte in LC.
Toxicity/Toxicokinetics
The labeled compound is non-toxic at the trace concentrations used for analytical purposes. The parent compound, 1-Methylinosine, is an endogenous modified nucleoside that is naturally present in the body. The product is "For research use only" and not for human therapeutic or diagnostic use.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019;53(2):211-216.

[2]. 1-Methylinosine-Human Metabolome Database.

Additional Infomation
1-Methylinosine-d3 is a research-grade stable isotope-labeled chemical (Internal Standard) used for LC-MS/MS quantification. It is not a drug and has no FDA approval for therapeutic use. It is used in pharmaceutical research for biomarker quantitation, particularly for studying RNA modification and cancer metabolism. The non-labeled compound is a known urinary biomarker for breast cancer.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C11H11D3N4O5
Molecular Weight
285.27
Related CAS #
1-Methylinosine;2140-73-0
Appearance
White to off-white solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.5055 mL 17.5273 mL 35.0545 mL
5 mM 0.7011 mL 3.5055 mL 7.0109 mL
10 mM 0.3505 mL 1.7527 mL 3.5055 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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