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Biotin-KRpep-2d acetate

Cat No.:V77201 Purity: ≥98%
Biotin-KRpep-2d acetate is a biotin-labeled KRpep-2d.
Biotin-KRpep-2d acetate
Biotin-KRpep-2d acetate Chemical Structure Product category: Peptides
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes

Other Forms of Biotin-KRpep-2d acetate:

  • KRpep-2d
  • KRpep-2d TFA
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Biotin-KRpep-2d acetate is a biotin-labeled KRpep-2d.
Biotin-KRpep-2d acetate is a biotin-labeled derivative of KRpep-2d, a selective inhibitory peptide targeting the K-Ras(G12D) mutant. KRpep-2d exhibits potent non-covalent inhibition against K-Ras(G12D) while showing selectivity over wild-type K-Ras and K-Ras(G12C) mutants. The biotinylation enables affinity purification and detection applications via streptavidin-biotin systems, facilitating protein interaction studies and immune detection in cancer research focusing on the Ras signaling pathway.
Biological Activity I Assay Protocols (From Reference)
Targets
Biotin-KRpep-2d acetate targets the Ras protein, specifically the K-Ras(G12D) mutant. Ras is a critical member of the Ras protein family and an attractive cancer therapeutic target. The parental KRpep-2d is identified as a selective inhibitory peptide against the K-Ras(G12D) mutant, with selectivity over wild-type (WT) K-Ras and K-Ras(G12C) mutants. This compound is involved in the GPCR/G Protein and MAPK/ERK signaling pathways.
ln Vitro
In vitro, the parental KRpep-2d has demonstrated strong non-covalent inhibition of K-Ras(G12D) in cell-free enzyme activity assays with an IC50 of 1.6 nM. It is also effective in cell-based assays. As a biotinylated derivative, Biotin-KRpep-2d acetate itself is primarily used as a detection tool rather than an active inhibitor in functional assays, enabling the study of K-Ras(G12D) interactions in cellular contexts through streptavidin-based pull-down experiments.
ln Vivo
In vivo activity data for Biotin-KRpep-2d acetate have not been extensively reported in available literature. As a biotin-labeled peptide derivative used primarily as a research tool for affinity purification and detection, its application is predominantly focused on in vitro and ex vivo analyses. Detailed animal model efficacy studies are not typically conducted for this type of labeling reagent.
Enzyme Assay
The assessment of binding affinity for the parental KRpep-2d peptide involves cell-free enzyme activity assays measuring inhibition of K-Ras(G12D). For the biotinylated version, binding studies leverage the high-affinity biotin-streptavidin interaction. The biotin moiety provides strong and specific binding to streptavidin-coated surfaces or beads, allowing for the capture and isolation of K-Ras(G12D) protein complexes from cell lysates or other biological samples.
Cell Assay
Cellular assays for Biotin-KRpep-2d acetate utilize the streptavidin-biotin system for protein interaction studies and detection. The compound can be incubated with cell lysates containing K-Ras proteins, followed by pull-down using streptavidin beads. Bound proteins are then eluted and analyzed by immunoblotting to identify interacting partners. Alternatively, it can be used in immunofluorescence applications to visualize K-Ras localization in fixed cells.
Animal Protocol
Detailed animal experimental protocols for Biotin-KRpep-2d acetate are not described in available literature. The compound is a biotin-labeled research tool intended for use in in vitro biochemical and cell-based assays. In vivo administration studies are not standard for such labeling reagents, and no specific dosing or animal model data are available from product documentation.
ADME/Pharmacokinetics
Pharmacokinetic data for Biotin-KRpep-2d acetate are not available from standard product literature. As a biotinylated peptide derivative and research reagent, its primary application is in affinity purification and detection assays. Pharmacokinetic parameters such as absorption, distribution, metabolism, and excretion (ADME) are not characterized for this type of tool compound, which is not intended for in vivo therapeutic development.
Toxicity/Toxicokinetics
Toxicological data for Biotin-KRpep-2d acetate have not been extensively reported in standard product literature. As a research-use only compound, routine safety assessments for acute toxicity, genotoxicity, and organ-specific toxicity are not typically described. For laboratory use, standard chemical safety precautions for peptide-based reagents should be followed, including appropriate personal protective equipment.
Additional Infomation
Biotin-KRpep-2d acetate has a molecular weight of 2805.32 with the molecular formula C118H198N46O28S3. The peptide sequence is {Biotin}-Arg-Arg-Arg-Arg-Cys-Pro-Leu-Tyr-Ile-Ser-Tyr-Asp-Pro-Val-Cys-Arg-Arg-Arg-Arg-NH2 with a disulfide bridge between Cys5 and Cys15. The compound is typically stored at -80degC powder for up to 2 years and is soluble in water at 100 mg/mL. It is used exclusively for research purposes and not for human therapy.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C118H198N46O28S3
Molecular Weight
2805.32
Related CAS #
KRpep-2d;2098181-84-9
Appearance
White to off-white solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O :~100 mg/mL (~35.65 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.3565 mL 1.7823 mL 3.5647 mL
5 mM 0.0713 mL 0.3565 mL 0.7129 mL
10 mM 0.0356 mL 0.1782 mL 0.3565 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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