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Ethionamide-d3 (2-ethylthioisonicotinamide-d3)

Cat No.:V77031 Purity: ≥98%
Ethionamide-d3 is the deuterated form of Ethionamide.
Ethionamide-d3 (2-ethylthioisonicotinamide-d3)
Ethionamide-d3 (2-ethylthioisonicotinamide-d3) Chemical Structure Product category: Bacterial
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes

Other Forms of Ethionamide-d3 (2-ethylthioisonicotinamide-d3):

  • Ethionamide hydrochloride
  • Ethionamide Sulfoxide-d3
  • Ethionamide
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Ethionamide-d3 is the deuterated form of Ethionamide. Ethionamide (2-ethylthioisonicotinamide) is a second-line anti-tuberculosis antibiotic.
Ethionamide-d3 is the deuterium-labeled form of Ethionamide (2-ethylthioisonicotinamide), a second-line anti-tuberculosis antibiotic used for the treatment of tuberculosis, particularly multidrug-resistant tuberculosis (MDR-TB). The introduction of three deuterium atoms (d3) serves as an internal standard for the quantification of ethionamide by GC-MS or LC-MS in pharmacokinetic studies and drug monitoring applications.
Biological Activity I Assay Protocols (From Reference)
Targets
Ethionamide targets the InhA enzyme (enoyl-ACP reductase) involved in mycolic acid biosynthesis, a critical component of the Mycobacterium tuberculosis cell wall. It functions as a prodrug that requires metabolic activation via oxidation by flavin monooxygenase (specifically EthA monooxygenase) within the bacterial cell. The activated form inhibits InhA, disrupting mycolic acid synthesis and leading to bacterial cell death.
ln Vitro
Drug compounds have included stable heavy isotopes of carbon, hydrogen, and other elements, mostly as tracers for quantification throughout the drug development process. Due to its potential to alter the pharmacokinetic and metabolic characteristics of medications, deuteration has drawn attention[1].
In vitro, ethionamide shows potent antimycobacterial activity against Mycobacterium tuberculosis with minimum inhibitory concentrations (MICs) ranging from 0.3-1.25 ug/mL. It is activated via oxidation by flavin monooxygenase and specifically inhibits the InhA enzyme. Ethionamide-d3 is not typically studied for independent bioactivity as it is used as an analytical standard, but it retains the same antimicrobial activity as unlabeled ethionamide due to minimal isotope effect on binding.
ln Vivo
In vivo, ethionamide is effective against susceptible and some drug-resistant strains of M. tuberculosis in animal models of tuberculosis. The compound distributes well into tissues including lung tissue where mycobacteria reside. Ethionamide-d3 serves as a tracer to study the pharmacokinetic behavior and tissue distribution of ethionamide following oral or intravenous administration in preclinical species, enabling accurate quantification of drug concentrations by mass spectrometry.
Enzyme Assay
For receptor-binding or enzyme inhibition assays of ethionamide-d3, the same protocols apply as for unlabeled ethionamide. Incubate purified InhA enzyme (0.1-1 ug) with varying concentrations of ethionamide-d3 (0.1-100 uM) in reaction buffer (100 mM HEPES, 100 mM KCl, 1 mM DTT, pH 7.5) for 10-30 minutes at 25degC. Add substrate (2-trans-enoyl-ACP or crotonoyl-CoA) and NADH (100 uM). Measure NADH consumption by absorbance at 340 nm over 5-15 minutes. IC50 values typically in the 0.1-1 uM range.
Cell Assay
For M. tuberculosis culture assays (BACTEC or broth microdilution), grow M. tuberculosis H37Rv in Middlebrook 7H9 broth supplemented with 10% OADC enrichment at 37degC. Prepare 2-fold serial dilutions of ethionamide-d3 (0.08-10 ug/mL) in 96-well plates. Add bacterial inoculum (approximately 5 × 10^5 CFU/mL). Incubate for 5-7 days. Add resazurin (12.5 ug/mL) and incubate for additional 4-24 hours; visual color change from blue to pink indicates growth. Determine MIC as the lowest concentration preventing color change. For isotope tracer studies, add ethionamide-d3 (1-10 uM) to bacterial cultures and measure intracellular concentrations by LC-MS.
Animal Protocol
For pharmacokinetic studies, administer ethionamide-d3 to mice, rats, or dogs by oral gavage (20-100 mg/kg) or intravenous injection (5-20 mg/kg). Collect blood at predetermined time points (0, 0.5, 1, 2, 4, 6, 8, 12, 24 hours post-dose). Harvest plasma and various tissues (lung, liver, kidney, spleen) at selected time points. Extract with acetonitrile or solid-phase extraction and analyze by LC-MS/MS using the d3 label for internal standardization. Calculate PK parameters: Cmax, Tmax, AUC, t1/2, clearance, volume of distribution, and oral bioavailability.
ADME/Pharmacokinetics
Ethionamide-d3 demonstrates similar pharmacokinetic properties to unlabeled ethionamide. Ethionamide is rapidly absorbed after oral administration, with peak plasma concentrations reached within 1-2 hours. It has a terminal elimination half-life of approximately 2-4 hours in humans and rodents. Oral bioavailability is high (>80%). The compound is extensively metabolized in the liver, primarily by flavin-containing monooxygenases and cytochrome P450 enzymes, with metabolites including the active sulfoxide form and inactive conjugates excreted in urine.
Toxicity/Toxicokinetics
Deuterium substitution has the potential to alter pharmacokinetic properties due to kinetic isotope effects, potentially reducing metabolic clearance and extending half-life. The toxicity profile of ethionamide-d3 is expected to be similar to that of unlabeled ethionamide. Ethionamide can cause dose-dependent adverse effects including gastrointestinal disturbances (nausea, vomiting, diarrhea), hepatotoxicity, hypothyroidism, and neurologic symptoms (headache, dizziness, peripheral neuropathy). Chronic use requires monitoring of liver function and thyroid hormones. The compound is not for human use as a research standard.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019;53(2):211-216.

[2]. Vannelli, T.A., A. Dykman, and P.R. Ortiz de Montellano, The antituberculosis drug ethionamide is activated by a flavoprotein monooxygenase. J Biol Chem, 2002. 277(15): p. 12824-9.

[3]. Quemard, A., G. Laneelle, and C. Lacave, Mycolic acid synthesis: a target for ethionamide in mycobacteria? Antimicrob Agents Chemother, 1992. 36(6): p. 1316-21.

Additional Infomation
Ethionamide-d3 is a stable isotope-labeled compound used as an internal standard in bioanalytical method development for quantification of ethionamide in biological matrices. Ethionamide remains an important drug for MDR-TB treatment, often used in combination with other second-line drugs including kanamycin, capreomycin, and fluoroquinolones. The drug is activated by the bacterial EthA monooxygenase; mutations in the ethA gene are a common mechanism of ethionamide resistance. Store ethionamide-d3 desiccated at -20degC protected from light.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C8H7D3N2S
Molecular Weight
169.26
Related CAS #
Ethionamide;536-33-4
Appearance
Typically exists as solid at room temperature
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.9081 mL 29.5404 mL 59.0807 mL
5 mM 1.1816 mL 5.9081 mL 11.8161 mL
10 mM 0.5908 mL 2.9540 mL 5.9081 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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