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JB-95 acetate

Cat No.:V76865 Purity: ≥98%
JB-95 acetate is a β-hairpin macrocyclic peptide that displays potent antimicrobial property against Escherichia coli.
JB-95 acetate
JB-95 acetate Chemical Structure Product category: Bacterial
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
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Product Description
JB-95 acetate is a β-hairpin macrocyclic peptide that displays potent antimicrobial property against Escherichia coli. JB-95 acetate selectively damages the outer membrane of E. coli but does not damage the inner membrane of E. coli.
JB-95 acetate is a beta-hairpin macrocyclic peptide with potent and selective antibacterial activity against Escherichia coli (E. coli). It is a peptidomimetic antibiotic that represents a novel class of antimicrobial agents. The compound exhibits no cellular lytic activity and its mechanism involves selectively compromising the outer membrane (OM) of E. coli while sparing the inner membrane.
Biological Activity I Assay Protocols (From Reference)
Targets
JB-95 acetate targets the outer membrane of E. coli, specifically interacting with selected beta-barrel outer membrane proteins, including the essential proteins BamA and LptD [3L10-L12]. By binding to these targets, JB-95 acetate disrupts the integrity of the outer membrane. Unlike traditional antibiotics, it does not target an intracellular enzyme or receptor but a structural component of the bacterial cell envelope.
ln Vitro
In cell-free assays, JB-95 acetate is evaluated for its ability to disrupt isolated E. coli outer membranes. The interaction with target proteins can be studied using surface plasmon resonance (SPR) to determine binding affinity to purified BamA or LptD. However, as an antibacterial peptide, its primary activity is assessed in whole-cell systems rather than traditional enzyme inhibition assays.
ln Vivo
JB-95 acetate exhibits potent antimicrobial activity against E. coli with minimum inhibitory concentrations (MICs) in the low micromolar to nanomolar range [16L5-L7]. In cell culture, the peptide selectively damages the bacterial outer membrane as visualized by electron microscopy and fluorescence studies, without affecting the inner membrane or causing cellular lysis [14L8-L10]. The compound is active against both laboratory and clinical E. coli strains.
Enzyme Assay
The outer membrane disruption assay is performed using isolated E. coli outer membrane vesicles or whole cells. The effect of JB-95 acetate on membrane integrity is measured by assessing the uptake of membrane-impermeable fluorescent probes like 1-N-phenylnaphthylamine (NPN). An increase in fluorescence indicates outer membrane permeabilization. The assay is conducted in 96-well plates with a fluorescence reader, and data is expressed as a percentage of control.
Cell Assay
E. coli cultures are grown to mid-log phase in LB or MH broth. JB-95 acetate is added at concentrations ranging from 0.1 to 100 uM, and cultures are incubated for 2-4 hours at 37degC. Outer membrane disruption is assessed by NPN uptake fluorescence, while cell viability is measured by colony-forming unit (CFU) counting. Bacterial morphology is examined by scanning and transmission electron microscopy after 1 hour of treatment. Controls include untreated cells and a known membrane-disrupting agent.
Animal Protocol
In a mouse model of E. coli septicemia or peritonitis, JB-95 acetate has been evaluated for in vivo efficacy [17L4-L6]. The compound is administered via intraperitoneal injection (e.g., 5-20 mg/kg) at the time of bacterial challenge. The primary endpoint is animal survival over 7-14 days. Bacterial load in blood, peritoneal fluid, and organs (liver, spleen) is quantified by CFU counts. Treatment with JB-95 acetate significantly reduces bacterial burden compared to vehicle control.
ADME/Pharmacokinetics
JB-95 acetate is a macrocyclic peptide with a molecular weight of 1971.41 Da (free base) [8L15-L16]. It is soluble in water at ≥50 mg/mL. As a peptide, it has a short plasma half-life (minutes) due to rapid proteolytic degradation and renal clearance. For in vivo studies, it is formulated in a solution containing DMSO, PEG300, Tween 80, and saline, or directly in sterile water. The compound is stored as a powder at -20degC under nitrogen and away from moisture and light [8L18-L19].
Toxicity/Toxicokinetics
JB-95 acetate is generally well-tolerated at antibacterial doses in animal models. Its selectivity for the outer membrane of E. coli without disrupting the inner membrane of mammalian cells suggests a favorable toxicity profile. In cell culture, no significant cytotoxicity is observed at concentrations that are effective against bacteria. Standard laboratory safety precautions (gloves, lab coat) should be followed as the compound may be a skin/eye irritant. No formal clinical toxicology data is available.
References
[1]. Urfer M, et, al. A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli. J Biol Chem. 2016 Jan 22;291(4):1921-1932.
Additional Infomation
JB-95 acetate is a research-use-only peptidomimetic antibiotic discovered through a novel approach targeting the outer membrane of Gram-negative bacteria [14L4-L10]. It has not been approved for clinical use. Its unique mechanism, involving disruption of the outer membrane via binding to BamA and LptD, opens new avenues for antibiotic development against resistant E. coli strains [3L10-L12]. The compound is supplied as a powder (C92H151N35O14.xC2H4O2) and should be stored sealed under nitrogen, protected from light. It is for laboratory use only and not for human therapeutic applications.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C92H151N35O14.XC2H4O2
Molecular Weight
1971.41 (free base)
Appearance
White to off-white solid powder
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O :≥ 50 mg/mL
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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