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BAY 1892005

Alias: BAY 1892005; BAY-1892005; BAY1892005; 2036352-13-1;
Cat No.:V76057 Purity: ≥98%
BAY 1892005 is a modulator of p53 protein that acts on p53 aggregates and does not cause reactivation of mutant p53.
BAY 1892005
BAY 1892005 Chemical Structure CAS No.: 2036352-13-1
Product category: p53
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
25mg
50mg
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1g
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Product Description
BAY 1892005 is a modulator of p53 protein that acts on p53 aggregates and does not cause reactivation of mutant p53.
Biological Activity I Assay Protocols (From Reference)
Targets
p53 protein
ln Vitro
BAY 1892005 Cell growth can be inhibited by the p53 mutant cell lines Huh7 (IC50=11.2 μM) and H358 (IC50=11.1 μM) [1].
BAY 249716 showed significant stabilization of all three p53 protein variants, whereas BAY 1892005 showed stabilization of p53WT and p53Y220C, indicating direct interaction with p53. BAY 1892005 contains a reactive head group (Figure 2A) that could be involved in covalent binding to p53. Indeed, by mass spectrometry, we confirmed that BAY 1892005 binds covalently to mutant p53R175H and p53Y220C (Figures 2B and S2). Taken together we conclude that the identified aminothiazoles potentially directly interact with structural p53 mutant proteins. [1]
Enzyme Assay
Intact mass analysis: 25 µM of p53H175R and p53Y220C protein were incubated with 100 µM BAY 1892005. Compound dilution were done in sodium acetate from a 10 mM stock solution in DMSO resulting in a final DMSO concentration of 1 %. Reaction were stopped after 1 h via adding 2 µl of 4 % TFA to 20 µl reaction volume. Samples were analysed on a Waters nanoAcquity coupled to a Waters SYNAPT G2- S with ESI source. The Waters nanoAcquity were equipped with a Waters Mass Prep C4, 2.1 x 5mm to desalt the samples. The nanoAcquity settings was as followed: Temperature; 65 °C, flow rate; 100 µL /min, buffer A; water / 0.1 % formic acid, buffer B; ACN / 0.1 % formic acid, run time; 6 min, gradient: in 3 min from 20% buffer B to 80%. The Waters SYNAPT G2-S were operating in ESI positive mode with the following settings: Source temperature; 80 °C, desolvation temperature; 150 °C with a desolvation gas flow rate of 500 L/hour, capillary voltage; 3 kV and cone voltage; 40V. The mass data was collected at a range of 150 m/z – 2200 m/z. Raw data were deconvoluted using MaxEnt1 from Waters. [1]
Cell Assay
Cell proliferation assays [1]
Cell viability was determined by means of the AlamarBlue® reagent in a Victor X3 Multilabel Plate Reader. Cells were seeded at a concentration of 4000 cells/well in 100 µl of growth medium (RPMI1640, 20% FCS) on 96-well microtiter plates. The SK-BR-3, Au-565, H358 and MCF7 (all from ATCC), were seeded at a concentration of 5000 cells/well in 100 µl of growth medium (RPMI1640, 20% FCS) on 96-well microtiter plates. The plates were treated with various substance dilutions (3E-5 M, 1E-5 M, 3E-6 M, 1E-6 M, 3E-7 M, 1E-7 M, 3E-8 M, 1E-8 M) and incubated at 37°C for 96 hours. The IC50 values (substance concentration needed for 50% inhibition of cell proliferation) were calculated from fluorescence values of treated vs. untreated cells.
References

[1]. Identification of Small Molecules that Modulate Mutant p53 Condensation.iScience, 2020, 23(9):101517.

Additional Infomation
Structural mutants of p53 induce global p53 protein destabilization and misfolding, followed by p53 protein aggregation. First evidence indicates that p53 can be part of protein condensates and that p53 aggregation potentially transitions through a condensate-like state. We show condensate-like states of fluorescently labeled structural mutant p53 in the nucleus of living cancer cells. We furthermore identified small molecule compounds that interact with the p53 protein and lead to dissolution of p53 structural mutant condensates. The same compounds lead to condensation of a fluorescently tagged p53 DNA-binding mutant, indicating that the identified compounds differentially alter p53 condensation behavior depending on the type of p53 mutation. In contrast to p53 aggregation inhibitors, these compounds are active on p53 condensates and do not lead to mutant p53 reactivation. Taken together our study provides evidence for structural mutant p53 condensation in living cells and tools to modulate this process. [1]
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C11H8CLFN2OS
Molecular Weight
270.710423469543
Exact Mass
270.002
Elemental Analysis
C, 48.81; H, 2.98; Cl, 13.10; F, 7.02; N, 10.35; O, 5.91; S, 11.84
CAS #
2036352-13-1
PubChem CID
165417087
Appearance
Off-white to light yellow solid powder
LogP
2.8
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
3
Heavy Atom Count
17
Complexity
282
Defined Atom Stereocenter Count
0
SMILES
ClCC(NC1=NC(=CS1)C1C=CC=CC=1F)=O
InChi Key
JYANOVDYYBXVNL-UHFFFAOYSA-N
InChi Code
InChI=1S/C11H8ClFN2OS/c12-5-10(16)15-11-14-9(6-17-11)7-3-1-2-4-8(7)13/h1-4,6H,5H2,(H,14,15,16)
Chemical Name
2-chloro-N-[4-(2-fluorophenyl)-1,3-thiazol-2-yl]acetamide
Synonyms
BAY 1892005; BAY-1892005; BAY1892005; 2036352-13-1;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 250 mg/mL (923.50 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.6940 mL 18.4699 mL 36.9399 mL
5 mM 0.7388 mL 3.6940 mL 7.3880 mL
10 mM 0.3694 mL 1.8470 mL 3.6940 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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