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IDH1 Inhibitor 7-d2

Cat No.:V74041 Purity: ≥98%
IDH1 Inhibitor 7-d2 is the deuterated form of IDH1 Inhibitor 7.
IDH1 Inhibitor 7-d2
IDH1 Inhibitor 7-d2 Chemical Structure CAS No.: 2135309-51-0
Product category: IDH
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes

Other Forms of IDH1 Inhibitor 7-d2:

  • IDH1 Inhibitor 7
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
IDH1 Inhibitor 7-d2 is the deuterated form of IDH1 Inhibitor 7. IDH1 Inhibitor 7 is an IDH1 inhibitor (antagonist) with IC50 of less than 100 nM.
IDH1 Inhibitor 7-d2 is a stable, deuterium-labeled form of the potent IDH1 inhibitor, IDH1 Inhibitor 7. This isotopic analog is designed for use in quantitative bioanalysis and as an internal standard in LC-MS/MS methods to track the pharmacokinetics and metabolism of IDH1-targeting drugs in drug discovery.
Biological Activity I Assay Protocols (From Reference)
Targets
Isocitrate dehydrogenase 1 (IDH1).
ln Vitro
Drug compounds have included stable heavy isotopes of carbon, hydrogen, and other elements, mostly as quantitative tracers while the drugs were being developed. Because deuteration may have an effect on a drug's pharmacokinetics and metabolic properties, it is a cause for concern [1].
IDH1 Inhibitor 7-d2 is a labeled version of the potent IDH1 inhibitor (IC50 < 100 nM). It is not typically used to assess biological activity itself, but rather as an analytical standard or tracer. The parent compound, IDH1 Inhibitor 7, selectively inhibits IDH1, reducing the production of the oncometabolite 2-hydroxyglutarate (2-HG) in IDH1-mutant cells. The label does not alter the biological activity of the parent.
Enzyme Assay
The standard IDH1 biochemical assay uses purified recombinant IDH1 (mutant or wild-type) enzyme. The reaction mixture contains IDH1, the substrate (isocitrate), cofactor (NADP+), and test compound. NADPH production (a measure of enzyme activity) is monitored continuously at 340 nm in a microplate reader. Alternatively, the production of 2-HG can be measured by LC-MS/MS, where the deuterated compound serves as an internal standard.
Cell Assay
IDH1 Inhibitor 7-d2 is not typically used in cell-based assays for efficacy. Instead, the parent compound (non-deuterated) is used to treat IDH1-mutant cancer cell lines (e.g., HT1080, U87MG). The cellular production of 2-HG is measured by LC-MS/MS, and the labeled compound can be used as an internal standard for accurate quantification. Effects on cell proliferation and differentiation are also assessed.
Animal Protocol
As a deuterated internal standard, IDH1 Inhibitor 7-d2 is primarily used in the development of PK assays. It is co-administered or spiked into samples to accurately quantify the concentration of IDH1-targeting drugs in plasma and tissue samples. The in vivo activity of the parent compound would be assessed in xenograft models, measuring tumor 2-HG reduction and tumor growth inhibition.
ADME/Pharmacokinetics
IDH1 Inhibitor 7-d2 itself is not used for PK studies of its own therapeutic properties. Instead, it serves as an internal standard for the quantitative bioanalysis of the parent IDH1 Inhibitor 7 or other IDH1 inhibitors in biological matrices. Deuterium labeling provides a mass shift for LC-MS/MS detection without altering the extraction recovery or ionization efficiency.
Toxicity/Toxicokinetics
No specific toxicology data are available for the deuterated compound. The parent compound, IDH1 Inhibitor 7, is an investigational inhibitor with an acceptable safety profile in preclinical studies. The isotopic substitution is not expected to introduce additional toxicity. Standard handling precautions for research chemicals apply.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019;53(2):211-216.

[2]. Compound having mutant idh inhibitory activity, preparation method and use thereof. Patent WO2017162133A1.

Additional Infomation
IDH1 Inhibitor 7-d2 is a research chemical and not an approved drug. It is a stable isotope-labeled internal standard used in LC-MS/MS bioanalytical method development for IDH1 inhibitors. The incorporation of deuterium atoms improves the compound's stability against metabolic degradation, making it an ideal internal standard for accurate and precise quantification of IDH1 inhibitor concentrations in preclinical and clinical research samples.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H24F3N7O
Molecular Weight
461.48
Exact Mass
461.211
CAS #
2135309-51-0
Related CAS #
IDH1 Inhibitor 7;2135309-56-5
PubChem CID
137440052
Appearance
White to off-white solid powder
LogP
3.8
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
6
Heavy Atom Count
33
Complexity
671
Defined Atom Stereocenter Count
2
SMILES
C([C@H]1C([2H])([2H])NC(N1C1C=CN=C(N=1)N[C@H](C1N=CN(C2C=CC(=CC=2)C(F)(F)F)C=1)C)=O)(C)C
InChi Key
LVRDYDOHWFEBQG-RDMILJEOSA-N
InChi Code
InChI=1S/C22H24F3N7O/c1-13(2)18-10-27-21(33)32(18)19-8-9-26-20(30-19)29-14(3)17-11-31(12-28-17)16-6-4-15(5-7-16)22(23,24)25/h4-9,11-14,18H,10H2,1-3H3,(H,27,33)(H,26,29,30)/t14-,18+/m0/s1/i10D2
Chemical Name
(5S)-4,4-dideuterio-5-propan-2-yl-1-[2-[[(1S)-1-[1-[4-(trifluoromethyl)phenyl]imidazol-4-yl]ethyl]amino]pyrimidin-4-yl]imidazolidin-2-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.1669 mL 10.8347 mL 21.6694 mL
5 mM 0.4334 mL 2.1669 mL 4.3339 mL
10 mM 0.2167 mL 1.0835 mL 2.1669 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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