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D-Pro-Phe-Arg-Chloromethylketone

Cat No.:V73134 Purity: ≥98%
D-Pro-Phe-Arg-Chloromethylketone is an inhibitor (blocker/antagonist) of coagulation factor XII and plasma kallikrein, and plays important roles in thrombosis and inflammation.
D-Pro-Phe-Arg-Chloromethylketone
D-Pro-Phe-Arg-Chloromethylketone Chemical Structure CAS No.: 88546-74-1
Product category: EGFR
This product is for research use only, not for human use. We do not sell to patients.
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1mg
5mg
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Product Description
D-Pro-Phe-Arg-Chloromethylketone is an inhibitor (blocker/antagonist) of coagulation factor XII and plasma kallikrein, and plays important roles in thrombosis and inflammation.
D-Pro-Phe-Arg-Chloromethylketone (PCK) is a synthetic tripeptide chloromethyl ketone that acts as an irreversible, active-site-directed inhibitor of coagulation factor XII (FXII) and plasma kallikrein. The chloromethyl ketone group alkylates the active site histidine residue of the target serine protease, leading to permanent enzyme inactivation. It is a valuable research tool for studying thrombosis, inflammation, and the contact activation system.
Biological Activity I Assay Protocols (From Reference)
Targets
Coagulation Factor XII (FXII) and Plasma Kallikrein (PKal). D-Pro-Phe-Arg-CMK is an irreversible inhibitor of these two serine proteases. The D-amino acid at the N-terminus increases metabolic stability. The chloromethyl ketone (CMK) group is a reactive electrophile that forms a covalent bond with the active site histidine, permanently inactivating the enzyme.
ln Vitro
In vitro, D-Pro-Phe-Arg-Chloromethylketone (PCK) is a potent, irreversible inhibitor of coagulation factor XII and plasma kallikrein. It acts as an active-site titrant, covalently modifying the active site histidine residue. By inhibiting these proteases, it blocks the intrinsic pathway of coagulation and the generation of bradykinin, which is involved in inflammation and pain. Detailed IC50 values are not provided, but PCK is known to be highly potent and selective, and is widely used as a standard inhibitor in coagulation research.
ln Vivo
In vivo, by inhibiting FXII and plasma kallikrein, D-Pro-Phe-Arg-CMK has been shown to play important roles in thrombosis and inflammation. It has been used in animal models to study the contribution of the contact activation system to thrombus formation, angioedema, and sepsis. By irreversibly blocking these proteases, it can prevent thrombosis without increasing bleeding risk, as FXII is not essential for normal hemostasis.
Enzyme Assay
D-Pro-Phe-Arg-CMK can be used as an active-site titrant to determine the concentration of active FXIIa and plasma kallikrein in a solution. A fixed amount of the CMK inhibitor is incubated with a solution containing an unknown concentration of the target enzyme. The residual enzyme activity is measured using a chromogenic substrate (e.g., H-D-Pro-Phe-Arg-pNA). The concentration of active sites is determined by extrapolating the titration curve to zero activity. This is a method for quality control of enzyme preparations.
Cell Assay
For cell-based assays, the compound is used to inhibit FXIIa or plasma kallikrein activity in the conditioned media of cells. It can be added to cell culture media to prevent the activation of the contact system, which might interfere with the study of other pathways. For example, in studies of endothelial cell permeability, PCK can be added to prevent bradykinin generation from plasma kallikrein in supplemented serum. Its cell permeability is not a primary consideration, as its targets are typically in the extracellular environment or on the cell surface.
Animal Protocol
D-Pro-Phe-Arg-CMK has been used in mouse models of thrombosis (e.g., FeCl3-induced carotid artery injury). It can be administered intravenously at doses ranging from 1-10 mg/kg. The time to occlusion is measured as the primary endpoint. It has also been used in models of hereditary angioedema to prevent vascular leakage. The compound's irreversible mechanism results in a sustained pharmacodynamic effect, even after the free drug is cleared from the circulation.
ADME/Pharmacokinetics
The compound is a synthetic peptide with good stability. It has a molecular weight of 450.96 g/mol and a molecular formula of C21H31ClN6O3. It is soluble in DMSO and can be formulated in water (though it may be less stable in aqueous solution). For in vivo use, it is typically formulated in sterile saline or PBS. It should be stored as a lyophilized powder at -20degC to maintain stability. In solution, it should be used promptly and stored at -80degC.
Toxicity/Toxicokinetics
Detailed toxicological data for D-Pro-Phe-Arg-CMK are not provided. As an irreversible inhibitor of FXII and plasma kallikrein, it is expected to have a favorable safety profile, as deficiencies in FXII or plasma kallikrein do not cause a bleeding diathesis. However, the reactive chloromethyl ketone group could potentially react with off-target proteins if not properly dosed. Standard safety precautions for handling research chemicals should be followed. It is not for human use.
References

[1]. Factor XII as a Therapeutic Target in Thromboembolic and Inflammatory Diseases. Arterioscler Thromb Vasc Biol. 2017 Jan;37(1):13-20.

Additional Infomation
D-Pro-Phe-Arg-Chloromethylketone is also known as PCK, H-D-Pro-Phe-Arg-CMK, and is sometimes simply called "CMK inhibitor." It is used as a standard inhibitor in the study of the contact activation system. It is a valuable tool for dissecting the pathways leading to thrombosis, inflammation, and bradykinin-mediated diseases. The compound is not an FDA-approved drug.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H31CLN6O3
Molecular Weight
450.96
Exact Mass
450.215
CAS #
88546-74-1
PubChem CID
10456438
Appearance
White to off-white solid powder
LogP
2.323
Hydrogen Bond Donor Count
5
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
12
Heavy Atom Count
31
Complexity
635
Defined Atom Stereocenter Count
3
SMILES
C1C[C@@H](NC1)C(=O)N[C@@H](CC2=CC=CC=C2)C(=O)N[C@@H](CCCN=C(N)N)C(=O)CCl
InChi Key
HCCRRLVJBLDSLL-BBWFWOEESA-N
InChi Code
InChI=1S/C21H31ClN6O3/c22-13-18(29)15(8-4-11-26-21(23)24)27-20(31)17(12-14-6-2-1-3-7-14)28-19(30)16-9-5-10-25-16/h1-3,6-7,15-17,25H,4-5,8-13H2,(H,27,31)(H,28,30)(H4,23,24,26)/t15-,16+,17-/m0/s1
Chemical Name
(2R)-N-[(2S)-1-[[(3S)-1-chloro-6-(diaminomethylideneamino)-2-oxohexan-3-yl]amino]-1-oxo-3-phenylpropan-2-yl]pyrrolidine-2-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 100 mg/mL (221.75 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2175 mL 11.0875 mL 22.1749 mL
5 mM 0.4435 mL 2.2175 mL 4.4350 mL
10 mM 0.2217 mL 1.1087 mL 2.2175 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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