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5-Methoxytryptamine hydrochloride

Cat No.:V71132 Purity: ≥98%
5-Methoxytryptamine HCl, a metabolite of Melatonin, is a non-selective 5-HT receptor agonist.
5-Methoxytryptamine hydrochloride
5-Methoxytryptamine hydrochloride Chemical Structure CAS No.: 66-83-1
Product category: Endogenous Metabolite
This product is for research use only, not for human use. We do not sell to patients.
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Other Forms of 5-Methoxytryptamine hydrochloride:

  • 5-Methoxytryptamine (5-methoxytryptamine; O-Methylserotonin)
  • 5-Methoxytryptamine-d4
  • N-Biotinyl-5-methoxytryptamine
  • Melatonin-d3 (N-Acetyl-5-methoxytryptamine-d3)
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Top Publications Citing lnvivochem Products
Product Description
5-Methoxytryptamine HCl, a metabolite of Melatonin, is a non-selective 5-HT receptor agonist. 5-Methoxytryptamine HCl has no affinity for 5-HT3 receptors. 5-Methoxytryptamine HCl is also a potent antioxidant and has radioprotective properties.
5-Methoxytryptamine hydrochloride (Mexamine hydrochloride) is a non-selective serotonin receptor agonist that acts as a full agonist at multiple 5-HT receptor subtypes, including 5-HT1, 5-HT2, 5-HT4, 5-HT6, and 5-HT7, while exhibiting negligible to no affinity for the 5-HT3 receptor. It has a molecular formula of C11H15ClN2O and a molecular weight of 226.70. The compound is a metabolite of Melatonin and exhibits antioxidant and radioprotective properties. It is used in biochemical and neuroscience applications to study serotonin receptor activity.
Biological Activity I Assay Protocols (From Reference)
Targets
5-HT1 Receptor 5-HT2 Receptor 5-HT4 Receptor 5-HT5 Receptor 5-HT6 Receptor 5-HT7 Receptor Human Endogenous Metabolite
5-Methoxytryptamine hydrochloride targets multiple serotonin (5-HT) receptor subtypes. It acts as a non-selective full agonist at 5-HT1, 5-HT2, 5-HT4, 5-HT6, and 5-HT7 receptors, while having no affinity for the 5-HT3 receptor. It shows binding affinity for the rat brain 5-HT1A receptor with a Ki of 11 nM. By activating these receptors, the compound modulates serotonergic signaling pathways involved in mood regulation, gastrointestinal motility, and neurotransmitter release.
ln Vitro
In vitro, 5-Methoxytryptamine hydrochloride acts as a non-selective full agonist at multiple 5-HT receptor subtypes. Its activity is typically assessed by measuring its ability to stimulate cAMP accumulation or calcium mobilization in cells expressing various 5-HT receptors. The compound exhibits antioxidant properties in cell-based assays. It is used as a research reagent for serotonin receptor assays and to study the role of serotonergic signaling in various physiological and pathological processes.
ln Vivo
5-Methoxytryptamine hydrochloride causes rats to have severe hyperglycemia when given more than 1 mg/kg[1].
In vivo, 5-Methoxytryptamine hydrochloride is used in research to study serotonin receptor-mediated effects. As a metabolite of Melatonin, it may contribute to the physiological effects of melatonin through serotonin receptor activation. The compound's non-selective agonist profile makes it useful for studying the integrated effects of serotonin receptor activation. Its radioprotective properties have been investigated in pre-clinical models. However, comprehensive in vivo pharmacological studies are limited.
Enzyme Assay
For non-cell-based receptor binding assays, 5-Methoxytryptamine hydrochloride can be evaluated using membrane preparations from tissues or cells expressing various 5-HT receptor subtypes. Radioligand binding displacement experiments are performed using suitable radiolabeled ligands such as [3H]-8-OH-DPAT for 5-HT1A, [3H]-ketanserin for 5-HT2A, or [3H]-GR113808 for 5-HT4. Membrane homogenates are incubated with increasing concentrations of the test compound and a fixed concentration of the radioligand at room temperature for 60-90 minutes. Bound radioligand is separated from free by rapid filtration through glass fiber filters. Non-specific binding is determined in the presence of excess unlabeled ligand. Ki values are calculated from displacement curves using nonlinear regression analysis.
Cell Assay
For in vitro cellular assays, cells expressing various 5-HT receptor subtypes are cultured in appropriate media. For functional assays, the appropriate signaling readout is measured depending on the receptor subtype (e.g., cAMP accumulation for Gs-coupled receptors, calcium mobilization for Gq-coupled receptors). Cells are treated with various concentrations of 5-Methoxytryptamine hydrochloride, and the signaling response is measured using fluorescent indicators or ELISA-based detection. EC50 values are calculated from dose-response curves. For antioxidant assays, cells are treated with oxidative stressors in the presence or absence of the compound, and oxidative stress markers are measured.
Animal Protocol
For in vivo animal studies, 5-Methoxytryptamine hydrochloride can be administered to rodents via intraperitoneal injection. In models of serotonin-mediated behaviors, its effects on locomotion, anxiety, and gastrointestinal motility are assessed. In radioprotection studies, the compound's ability to protect against radiation-induced damage is evaluated. Dosing regimens vary depending on the specific model and desired exposure levels. Blood and tissue samples may be collected for pharmacokinetic analysis.
ADME/Pharmacokinetics
5-Methoxytryptamine hydrochloride has a molecular weight of 226.70 and a molecular formula of C11H15ClN2O. It is supplied as a crystalline solid with a purity of ≥98%. The compound is soluble in water and DMSO. It should be stored at -20°C for long-term stability. It is provided as a research-grade reagent for studies of serotonin receptor activity, antioxidant effects, and radioprotective actions in biochemical and neuroscience applications.
Toxicity/Toxicokinetics
The toxicity profile of 5-Methoxytryptamine hydrochloride has not been extensively reported. As a non-selective serotonin receptor agonist, potential adverse effects may include modulation of serotonergic signaling, which could affect mood, gastrointestinal function, and cardiovascular regulation. The compound is for research use only and is not intended for human consumption. Standard safety precautions should be observed when handling the compound.
References

[1]. Hyperglycemia induced by the 5-HT receptor agonist, 5-methoxytryptamine, in rats: involvement of the peripheral 5-HT2A receptor. Eur J Pharmacol. 1997 Apr 4;323(2-3):235-40.

[2]. Fourier transform infrared spectra and molecular structure of 5-methoxytryptamine, N-acetyl-5-methoxytryptamine and N-phenylsulfonamide-5-methoxytryptamine. Spectrochim Acta A Mol Biomol Spectrosc. 2003 Apr;59(6):1255-63.

[3]. 5-Methoxytryptamine and 2-methyl-5-hydroxytryptamine-induced desensitization as a discriminative tool for the 5-HT3 and putative 5-HT4 receptors in guinea pig ileum. Naunyn Schmiedebergs Arch Pharmacol. 1990 Jul;342(1):9-16.

Additional Infomation
See also: 5-methoxytryptamine (note moved to).
5-Methoxytryptamine hydrochloride (CAS 66-83-1) is a non-selective serotonin receptor agonist that acts as a full agonist at multiple 5-HT receptor subtypes including 5-HT1, 5-HT2, 5-HT4, 5-HT6, and 5-HT7, while exhibiting negligible affinity for the 5-HT3 receptor. It is a metabolite of Melatonin and exhibits antioxidant and radioprotective properties. It is used in biochemical and neuroscience applications to study serotonin receptor activity. It is available for research purposes only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C11H15CLN2O
Molecular Weight
226.70
Exact Mass
226.087
CAS #
66-83-1
Related CAS #
5-Methoxytryptamine;608-07-1
PubChem CID
6198
Appearance
White to off-white solid powder
Density
1.171 g/cm3
Boiling Point
380ºC at 760 mmHg
Melting Point
246 °C
Flash Point
183.6ºC
LogP
3.18
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
3
Heavy Atom Count
15
Complexity
186
Defined Atom Stereocenter Count
0
SMILES
COC1=CC2=C(C=C1)NC=C2CCN.Cl
InChi Key
TXVAYRSEKRMEIF-UHFFFAOYSA-N
InChi Code
InChI=1S/C11H14N2O.ClH/c1-14-9-2-3-11-10(6-9)8(4-5-12)7-13-11;/h2-3,6-7,13H,4-5,12H2,1H3;1H
Chemical Name
2-(5-methoxy-1H-indol-3-yl)ethanamine;hydrochloride
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.4111 mL 22.0556 mL 44.1112 mL
5 mM 0.8822 mL 4.4111 mL 8.8222 mL
10 mM 0.4411 mL 2.2056 mL 4.4111 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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