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L-Phenylalanine-3-13C ((S)-2-Amino-3-phenylpropionic acid-3-13C)

Cat No.:V70415 Purity: ≥98%
L-Phenylalanine-3-13C is 13C (carbon 13) labelled L-Phenylalanine.
L-Phenylalanine-3-13C ((S)-2-Amino-3-phenylpropionic acid-3-13C)
L-Phenylalanine-3-13C ((S)-2-Amino-3-phenylpropionic acid-3-13C) Chemical Structure CAS No.: 136056-02-5
Product category: Endogenous Metabolite
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes

Other Forms of L-Phenylalanine-3-13C ((S)-2-Amino-3-phenylpropionic acid-3-13C):

  • α-Methyl-DL-phenylalanine
  • L-Phenylalanine-13C ((S)-2-Amino-3-phenylpropionic acid-13C)
  • DL-Phenylalanine-d5 (2-Amino-3-phenylpropionic acid-d5)
  • N-Fmoc-4-(tert-butoxycarbonylmethoxy)-L-phenylalanine
  • L-Phenylalanine-d8 ((S)-2-Amino-3-phenylpropionic acid-d8)
  • L-Phenylalanine
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Top Publications Citing lnvivochem Products
Product Description
L-Phenylalanine-3-13C is 13C (carbon 13) labelled L-Phenylalanine. L-Phenylalanine ((S)-2-Amino-3-phenylpropionic acid) is an essential amino acid (AA) extracted from Escherichia coli. L-Phenylalanine is a voltage-dependent α2δ subunit Ca2+ channel antagonist (inhibitor) with a Ki of 980 nM. L-Phenylalanine is a competitive antagonist of the glycine and glutamate binding sites of NMDARs (KB 573 μM) and non-NMDARs. L-Phenylalanine is extensively used in the production of food flavors and pharmaceuticals.
L-Phenylalanine-3-13C is a stable isotope-labeled form of the essential amino acid L-phenylalanine. In this analog, the naturally abundant ¹2C atom at the beta‑position (C3) of the side chain is replaced with the stable, non‑radioactive isotope ¹3C. This labeled compound is primarily used as an internal standard for quantitative mass spectrometry (LC‑MS/MS) in pharmacokinetic, metabolic, and metabolomic studies of phenylalanine in biological samples, such as plasma, urine, and tissue homogenates.
Biological Activity I Assay Protocols (From Reference)
Targets
NMDA Receptor
CAS# 136056-02-5. As a stable isotope-labeled amino acid, L-Phenylalanine-3-13C is not typically used in receptor binding assays. However, the parent compound L‑phenylalanine is known to interact with several targets: it is a competitive antagonist of the glycine and glutamate binding sites on the NMDA receptor (KB 573 uM), a voltage‑dependent alpha2delta subunit Ca2+ channel antagonist (Ki 980 nM), and a substrate for amino acid transporters (e.g., LAT1, SNAT) and enzymes (e.g., phenylalanine hydroxylase, tyrosine transaminase). The ¹3C label does not alter these interactions.
ln Vitro
Drug compounds have included stable heavy isotopes of carbon, hydrogen, and other elements, mostly as quantitative tracers while the drugs were being developed. Because deuteration may have an effect on a drug's pharmacokinetics and metabolic properties, it is a cause for concern [1].
Not applicable. L-Phenylalanine-3-13C itself is not used to measure pharmacological activity in vitro. It is employed as an analytical standard. In metabolic studies, the compound is used as a tracer to quantify phenylalanine metabolism via mass spectrometry. It is added to biological samples at known concentrations (e.g., 50-100 ng/mL) to serve as an internal standard, correcting for variations in extraction efficiency, ion suppression, and instrument drift during LC‑MS/MS analysis.
ln Vivo
L-Phenylalanine-3-13C is not used in in vivo activity assays because it is an inert labeled standard. It does not have intrinsic pharmacological activity beyond that of unlabeled L‑phenylalanine. In pharmacokinetic studies, the compound is administered to animals as part of a test formulation containing unlabeled L‑phenylalanine, then used as an internal standard to quantify the unlabeled drug in plasma and tissue samples. Alternatively, the labeled form is administered as a tracer to study the absorption, distribution, metabolism, and excretion (ADME) of phenylalanine itself.
Enzyme Assay
For analytical method development, L-Phenylalanine-3-13C is used as an internal standard. A stock solution of the labeled compound is prepared in methanol/water (1:1) or acetonitrile at 1 mg/mL. Calibration standards are prepared by spiking blank biological matrix (e.g., plasma, urine, cell lysate) with known concentrations of unlabeled L‑phenylalanine (0.1-1000 ng/mL) and a fixed concentration of L‑Phenylalanine-3-13C (50-100 ng/mL). Proteins are precipitated by adding 3‑5 volumes of acetonitrile or methanol containing the internal standard. After centrifugation, the supernatant is evaporated under nitrogen and reconstituted in mobile phase (0.1% formic acid in water/methanol). Analysis is performed by LC‑MS/MS in MRM mode, monitoring transitions m/z 166.17 → 120.1 for unlabeled phenylalanine and m/z 167.17 → 121.1 for the labeled standard. The peak area ratio (analyte/IS) is plotted against the nominal concentration to generate a calibration curve.
Cell Assay
L-Phenylalanine-3-13C is not used in standard cellular activity assays because it is a stable isotope internal standard. However, in metabolic labeling experiments, cells (e.g., hepatocytes, neurons, or cancer cells) can be cultured in medium containing L‑Phenylalanine-3-13C (5-100 uM) for 24-72 hours. The labeled phenylalanine is incorporated into cellular proteins and metabolites. Cells are harvested, lysed, and proteins are hydrolyzed. The resulting amino acids are derivatized and analyzed by LC‑MS/MS to track the metabolic fate of phenylalanine, including its conversion to tyrosine, the synthesis of catecholamines, and incorporation into proteins. The ¹3C label allows precise quantification of metabolic flux without altering the cells' physiology.
Animal Protocol
L-Phenylalanine-3-13C is primarily used in ADME studies. Animals (e.g., male Sprague‑Dawley rats, 200-300 g) are administered a test formulation containing both unlabeled L‑phenylalanine (1-30 mg/kg) and a tracer amount of L‑Phenylalanine-3-13C (0.1-1 mg/kg) via oral gavage or intravenous injection. Blood is collected at predetermined time points (0, 0.25, 0.5, 1, 2, 4, 6, 8, 12, 24 h), plasma is separated, and tissues (liver, kidney, brain, heart) are collected at termination. Samples are processed as described under "Cell‑Free Protocol," and the concentration of unlabeled phenylalanine is calculated using the labeled compound as an internal standard. Pharmacokinetic parameters (Cmax, Tmax, AUC, t½, clearance, Vd) are determined by non‑compartmental analysis. In some studies, the labeled compound is administered alone as a tracer to assess the rate of phenylalanine metabolism and elimination.
ADME/Pharmacokinetics
L-Phenylalanine-3-13C (MW 166.18, C₉H11NO2 with ¹3C at C3) is a stable isotope‑labeled compound with 99 atom% ¹3C enrichment. It has the same chemical and physical properties as unlabeled L‑phenylalanine: it is a zwitterionic, water‑soluble amino acid (pKa1 ~2.2, pKa2 ~9.1). The compound is not metabolically altered by the presence of the ¹3C label, and its pharmacokinetics are identical to unlabeled L‑phenylalanine. L‑Phenylalanine is an essential amino acid that is absorbed from the gut, transported via the large neutral amino acid transporter (LAT1), and metabolized in the liver by phenylalanine hydroxylase to tyrosine. Its plasma half‑life in humans is approximately 1-2 hours, and it is excreted in urine as metabolites or as the parent compound.
Toxicity/Toxicokinetics
L-Phenylalanine-3-13C is chemically stable and non‑toxic at the concentrations used as an internal standard (ng/mL levels). The unlabeled L‑phenylalanine is an endogenous essential amino acid with an established safety profile; dietary intake is generally 1-2 g/day. High doses (>10 g/day) in susceptible individuals can cause neurotoxicity, but such doses are not used in research settings with the labeled compound. L-Phenylalanine-3-13C has no known acute or chronic toxicity at tracer doses. No genotoxicity or carcinogenicity data are specifically available for the labeled compound. Standard laboratory safety precautions for handling organic solvents and chemicals should be followed.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019;53(2):211-216.

Additional Infomation
L-Phenylalanine-3-13C (CAS 136056-02-5) is a stable isotope-labeled essential amino acid where the beta‑carbon is enriched with 99 atom% ¹3C. It is used as an internal standard for quantitative LC‑MS/MS analysis of phenylalanine in biological matrices, supporting pharmacokinetic and metabolomics studies. The compound has no approved therapeutic use and is strictly for research applications. The parent compound L‑phenylalanine is a precursor for neurotransmitters (dopamine, norepinephrine, epinephrine) and is used clinically in nutritional supplements. The labeled analog retains the same chemical and biological properties as the natural amino acid.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C813CH11NO2
Molecular Weight
166.18
Exact Mass
166.082
CAS #
136056-02-5
Related CAS #
L-Phenylalanine;63-91-2
PubChem CID
13000972
Appearance
White to off-white solid powder
Melting Point
270-275ºC (dec.)(lit.)
LogP
1.341
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
3
Heavy Atom Count
12
Complexity
153
Defined Atom Stereocenter Count
1
SMILES
C1=CC=C(C=C1)[13CH2][C@@H](C(=O)O)N
InChi Key
COLNVLDHVKWLRT-JCNVXSMLSA-N
InChi Code
InChI=1S/C9H11NO2/c10-8(9(11)12)6-7-4-2-1-3-5-7/h1-5,8H,6,10H2,(H,11,12)/t8-/m0/s1/i6+1
Chemical Name
(2S)-2-amino-3-phenyl(313C)propanoic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture and light.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 6.0176 mL 30.0879 mL 60.1757 mL
5 mM 1.2035 mL 6.0176 mL 12.0351 mL
10 mM 0.6018 mL 3.0088 mL 6.0176 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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