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N-Acetyl-5-hydroxytryptamine-d3 (N-Acetyl-5-hydroxytryptamine-d3; N-Acetylserotonin-d3; Normelatonin-d3; O-Demethylmelatonin-d3)

Cat No.:V69588 Purity: ≥98%
N-Acetyl-5-hydroxytryptamine-d3 is the deuterium labelled form of N-Acetyl-5-hydroxytryptamine.
N-Acetyl-5-hydroxytryptamine-d3 (N-Acetyl-5-hydroxytryptamine-d3; N-Acetylserotonin-d3; Normelatonin-d3; O-Demethylmelatonin-d3)
N-Acetyl-5-hydroxytryptamine-d3 (N-Acetyl-5-hydroxytryptamine-d3; N-Acetylserotonin-d3; Normelatonin-d3; O-Demethylmelatonin-d3) Chemical Structure CAS No.: 2001098-07-1
Product category: Endogenous Metabolite
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes

Other Forms of N-Acetyl-5-hydroxytryptamine-d3 (N-Acetyl-5-hydroxytryptamine-d3; N-Acetylserotonin-d3; Normelatonin-d3; O-Demethylmelatonin-d3):

  • N-Acetyl-5-hydroxytryptamine
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Top Publications Citing lnvivochem Products
Product Description
N-Acetyl-5-hydroxytryptamine-d3 is the deuterium labelled form of N-Acetyl-5-hydroxytryptamine. N-Acetyl-5-hydroxytryptamine is a melatonin precursor that effectively activates TrkB receptors.
N-Acetyl-5-hydroxytryptamine-d3 is the deuterium-labeled form of N-Acetyl-5-hydroxytryptamine, an endogenous metabolite of melatonin. The incorporation of stable heavy isotopes makes it an ideal internal standard for the quantification of its non-labeled counterpart in biological samples by LC-MS or GC-MS.
Biological Activity I Assay Protocols (From Reference)
Targets
No direct pharmacological target for its use as an analytical standard. The non-deuterated parent compound, N-Acetyl-5-hydroxytryptamine, is a precursor to melatonin and can also potently activate the TrkB (tropomyosin receptor kinase B) receptor. The deuterated version is used as a tracer.
ln Vitro
Drug compounds have included stable heavy isotopes of carbon, hydrogen, and other elements, mostly as quantitative tracers while the drugs were being developed. Because deuteration may have an effect on a drug's pharmacokinetics and metabolic properties, it is a cause for concern [1].
As an analytical internal standard, no direct in vitro or in vivo activity is relevant. The non-deuterated parent compound (N-acetylserotonin) has shown high affinity for the TrkB receptor, with an EC50 of about 0.2 microM, and can promote neurogenesis and neuronal survival in vitro. The deuterated analog is presumed to have similar chemistry.
ln Vivo
No in vivo activity is relevant for this compound as an analytical standard. It is designed for use in bioanalytical methods and is not intended for efficacy studies. Its in vivo behavior, such as distribution and metabolism, is expected to be identical to the non-labeled compound, which is involved in the melatonin synthesis pathway.
Enzyme Assay
Cell-free binding assays are not applicable for the deuterated standard. For bioanalytical method validation, the compound is spiked into a biological matrix (e.g., plasma, urine, or tissue homogenate) to correct for matrix effects and extraction efficiency during sample preparation. This is the "non-cell" part of analytical chemistry.
Cell Assay
Cell-based assays are not performed with the deuterated standard. The primary use is as a quality control standard. For method development, a known concentration of the labeled standard is added to the biological sample to act as a control to compensate for the loss of analyte during sample preparation and for variations in LC-MS/MS ionization.
Animal Protocol
For in vivo pharmacokinetic studies, the non-labeled parent drug, N-acetyl-5-hydroxytryptamine, is administered to animals. Blood or tissue samples are collected and spiked with the deuterated internal standard before analysis by LC-MS/MS. This allows for accurate quantification of the parent drug concentration to determine its PK profile.
ADME/Pharmacokinetics
As an analytical standard, no pharmacokinetic data are generated. The physical properties are known: a molecular weight of 221.27 (C12H11D3N2O2) and a CAS number of 2001098-07-1. It is a solid with a purity of ≥98.0% and is stored at -20degC, protected from light.
Toxicity/Toxicokinetics
No toxicity data are reported for this compound. As a stable isotope-labeled internal standard, it is not intended for in vivo pharmacological use. The standard handling precautions for fine chemicals apply. It is not a drug and has no therapeutic application.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019;53(2):211-216.

[2]. N-acetylserotonin activates TrkB receptor in a circadian rhythm. Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3876-81.

Additional Infomation
Other information: This compound is a stable isotope-labeled internal standard for the quantification of N-Acetyl-5-hydroxytryptamine (normelatonin) in GC/MS or LC-MS applications. Its synonyms include N-Acetylserotonin-d3 and O-Demethylmelatonin-d3. It is a chemical of very high purity (≥98%) used exclusively for research.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C12H11D3N2O2
Molecular Weight
221.27
Exact Mass
221.124
CAS #
2001098-07-1
Related CAS #
N-Acetyl-5-hydroxytryptamine;1210-83-9
PubChem CID
131708629
Appearance
White to off-white solid powder
Melting Point
112-117°C
LogP
0.5
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
3
Heavy Atom Count
16
Complexity
257
Defined Atom Stereocenter Count
0
SMILES
[2H]C([2H])([2H])C(=O)NCCC1=CNC2=C1C=C(C=C2)O
InChi Key
MVAWJSIDNICKHF-FIBGUPNXSA-N
InChi Code
InChI=1S/C12H14N2O2/c1-8(15)13-5-4-9-7-14-12-3-2-10(16)6-11(9)12/h2-3,6-7,14,16H,4-5H2,1H3,(H,13,15)/i1D3
Chemical Name
2,2,2-trideuterio-N-[2-(5-hydroxy-1H-indol-3-yl)ethyl]acetamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.5194 mL 22.5968 mL 45.1937 mL
5 mM 0.9039 mL 4.5194 mL 9.0387 mL
10 mM 0.4519 mL 2.2597 mL 4.5194 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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