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2-Aminonicotinaldehyde

Cat No.:V69036 Purity: ≥98%
2-Aminonicotinaldehyde is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
2-Aminonicotinaldehyde
2-Aminonicotinaldehyde Chemical Structure CAS No.: 7521-41-7
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
2-Aminonicotinaldehyde is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
2-Aminonicotinaldehyde (CAS#: 7521-41-7) is a heterocyclic aromatic building block with the molecular formula C6H6N2O and a molecular weight of 122.13 g/mol. It features a pyridine ring with an amino group at the 2-position and an aldehyde group at the 3-position, providing the exact ortho-disposition essential for the formation of fused N-heterocycles such as 1,8-naphthyridines. The compound is a key intermediate in organic synthesis and serves as a precursor for the synthesis of various pharmacologically active compounds. Its unique structure enables direct synthesis of 3-iodo-1,8-naphthyridines, which exhibit antimicrobial activity, and it is also used in the synthesis of 5-HT3 receptor antagonists and AKT inhibitors. The compound is employed in depression and cancer research, including hepatocellular carcinoma. Its dual functional groups (amino and aldehyde) allow for diverse chemical transformations, making it a versatile building block in medicinal chemistry and drug discovery.
Biological Activity I Assay Protocols (From Reference)
Targets
2-Aminonicotinaldehyde is a synthetic precursor for compounds that target specific biological receptors and enzymes. It is primarily utilized in the synthesis of 5-HT3 receptor antagonists, which target serotonin 5-HT3 receptors in the central and peripheral nervous systems for the treatment of depression, anxiety, and chemotherapy-induced nausea. The compound is also used in the synthesis of AKT inhibitors, which target the protein kinase B (AKT) signaling pathway involved in cell survival, proliferation, and metabolism, making them relevant for cancer research, including hepatocellular carcinoma. The compound's role as a synthetic intermediate means that its biological activity is mediated through its derivatives rather than the parent compound itself. In the synthesis of 5-HT3 receptor antagonists, the compound's aldehyde and amino groups enable the formation of the heterocyclic core structures required for receptor binding and antagonism.
ln Vitro
In vitro, 2-aminonicotinaldehyde is used as a key intermediate in the synthesis of various bioactive compounds. It can be used to synthesize 5-HT3 receptor antagonists and AKT inhibitors. The compound enables direct synthesis of 3-iodo-1,8-naphthyridines, which have demonstrated antimicrobial activity. In medicinal chemistry, it serves as a versatile building block for constructing fused heterocyclic systems that are important for drug discovery. The compound's reactivity allows for the formation of various derivatives through condensation, cyclization, and functional group transformations. It is particularly valuable for the synthesis of compounds targeting depression and cancer. In organic synthesis, it is used to create complex molecular scaffolds through reactions such as the formation of imines, Schiff bases, and other nitrogen-containing heterocycles.
ln Vivo
In vivo activity is not directly associated with the parent compound 2-aminonicotinaldehyde, but rather with its derivatives. The 5-HT3 receptor antagonists synthesized from this compound are evaluated in animal models of depression, anxiety, and nausea. These studies typically involve behavioral assays in rodents to assess antidepressant and anxiolytic effects. The AKT inhibitors synthesized from the compound are evaluated in animal models of cancer, including hepatocellular carcinoma, to assess antitumor efficacy. In these studies, tumor growth inhibition, survival rates, and biomarkers of AKT pathway activity are measured. The parent compound itself is not administered in vivo, as it is a synthetic intermediate rather than a pharmacological agent.
Enzyme Assay
Cell-free assays involving 2-aminonicotinaldehyde are focused on its use as a chemical reagent in organic synthesis. Standard protocols involve condensation and cyclization reactions to form 1,8-naphthyridines or other heterocyclic systems. For example, the compound can be reacted with appropriate reagents under inert atmosphere to form 3-iodo-1,8-naphthyridines. The reaction progress is monitored by TLC or HPLC, and the products are purified by column chromatography. For the synthesis of 5-HT3 receptor antagonists or AKT inhibitors, the compound is used as a starting material in multi-step synthetic routes. The compound's aldehyde group allows for reductive amination, condensation, and other transformations, while the amino group enables acylation, alkylation, and heterocycle formation.
Cell Assay
Cellular assays are not performed with the parent compound 2-aminonicotinaldehyde. Instead, its synthetic derivatives, such as 5-HT3 receptor antagonists and AKT inhibitors, are evaluated in cell-based systems. For 5-HT3 receptor antagonists, assays may involve measuring receptor binding affinity in cell lines expressing the 5-HT3 receptor, or functional assays measuring serotonin-induced calcium flux or ion channel activity. For AKT inhibitors, cancer cell lines are treated with the derivatives, and cell viability, proliferation, apoptosis, and AKT pathway phosphorylation are measured. The parent compound itself is not used as a test article in cell-based experiments due to its role as a synthetic building block.
Animal Protocol
Animal studies are not conducted with the parent compound 2-aminonicotinaldehyde. Its derivatives, including 5-HT3 receptor antagonists and AKT inhibitors, are evaluated in animal models. For depression research, 5-HT3 receptor antagonists are tested in rodent models such as the forced swim test, tail suspension test, and chronic mild stress models. For cancer research, AKT inhibitors are evaluated in xenograft or orthotopic mouse models of hepatocellular carcinoma and other cancers. In these studies, parameters such as tumor growth, survival, body weight, and biomarkers are assessed. The parent compound itself is not administered to animals, as it is a synthetic intermediate.
ADME/Pharmacokinetics
Pharmacokinetic data for the parent compound 2-aminonicotinaldehyde are not available, as it is primarily a synthetic intermediate rather than a drug candidate. As a small polar molecule with a molecular weight of 122.13 g/mol, it is expected to have moderate bioavailability if administered, but it is not intended for therapeutic use. The compound's amino and aldehyde groups may influence its absorption, distribution, metabolism, and excretion. However, comprehensive pharmacokinetic studies have not been performed, as the compound is not intended for systemic administration. For research purposes, the compound is typically handled as a neat chemical and not administered to living organisms for pharmacokinetic profiling.
Toxicity/Toxicokinetics
Toxicological data for 2-aminonicotinaldehyde are limited. The compound is air- and heat-sensitive, requiring storage under inert gas at 0-10°C to maintain stability. Standard safety precautions for handling aromatic amines and aldehydes apply, including the use of personal protective equipment such as gloves and safety goggles. The compound should be handled in a well-ventilated area, and contact with skin and eyes should be avoided. In case of exposure, affected areas should be rinsed thoroughly with water. The compound is not classified as a carcinogen or mutagen based on available data, but comprehensive toxicological evaluation has not been performed. As with all research chemicals, it should be handled with care and used only in accordance with safety guidelines.
Additional Infomation
2-Aminonicotinaldehyde is a research chemical, not an approved drug. It has no clinical trial or marketing approval status for therapeutic use. The compound is a key intermediate in organic synthesis and is used to synthesize 5-HT3 receptor antagonists and AKT inhibitors. It can be used in the research of depression and cancer, including hepatocellular carcinoma. The compound enables direct synthesis of 3-iodo-1,8-naphthyridines with antimicrobial activity. Its exact ortho-disposition is essential for 1,8-naphthyridine formation. The compound is supplied with a purity of ≥99.85% and is typically stored under inert gas at 0-10°C. Its dual functional groups (amino and aldehyde) make it a versatile building block for constructing complex heterocyclic scaffolds in medicinal chemistry and drug discovery.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C6H6N2O
Molecular Weight
122.12
Exact Mass
122.048
CAS #
7521-41-7
PubChem CID
737633
Appearance
Light yellow to yellow solid powder
Density
1.3±0.1 g/cm3
Boiling Point
290.7±25.0 °C at 760 mmHg
Melting Point
98-102 °C(lit.)
Flash Point
129.6±23.2 °C
Vapour Pressure
0.0±0.6 mmHg at 25°C
Index of Refraction
1.652
LogP
1.41
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
1
Heavy Atom Count
9
Complexity
105
Defined Atom Stereocenter Count
0
SMILES
O=C([H])C1C([H])=C([H])C([H])=NC=1N([H])[H]
InChi Key
NXMFJCRMSDRXLD-UHFFFAOYSA-N
InChi Code
InChI=1S/C6H6N2O/c7-6-5(4-9)2-1-3-8-6/h1-4H,(H2,7,8)
Chemical Name
2-aminopyridine-3-carbaldehyde
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: (1). This product requires protection from light (avoid light exposure) during transportation and storage.  (2). Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 8.1887 mL 40.9433 mL 81.8867 mL
5 mM 1.6377 mL 8.1887 mL 16.3773 mL
10 mM 0.8189 mL 4.0943 mL 8.1887 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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