yingweiwo

5-Bromo-2-methoxypyridine

5-Bromo-2-methoxypyridine is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
5-Bromo-2-methoxypyridine
5-Bromo-2-methoxypyridine Chemical Structure CAS No.: 13472-85-0
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
100g
Other Sizes
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text

 

  • Business Relationship with 5000+ Clients Globally
  • Major Universities, Research Institutions, Biotech & Pharma
  • Citations by Top Journals: Nature, Cell, Science, etc.
Top Publications Citing lnvivochem Products
Product Description
5-Bromo-2-methoxypyridine is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
5-Bromo-2-methoxypyridine (CAS#: 13472-85-0) is a halogenated heterocyclic aromatic compound with the molecular formula C6H6BrNO and a molecular weight of 188.02 g/mol. It is characterized by a bromine atom at the 5-position and a methoxy group at the 2-position on a pyridine ring. The compound appears as a light yellow liquid with a boiling point of 80 °C at 12 mmHg and a density of 1.453 g/mL at 25 °C. It has a refractive index of 1.554-1.556. The compound is used as a ligand for the central nicotinic acetylcholine receptor. It is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research. The compound can be prepared from 2,5-dibromopyridine with sodium hydroxide in methanol under reflux. Its bromine atom provides a handle for cross-coupling reactions, while the methoxy group can influence the compound's electronic properties and lipophilicity.
Biological Activity I Assay Protocols (From Reference)
Targets
5-Bromo-2-methoxypyridine is used as a ligand for the central nicotinic acetylcholine receptor. Nicotinic acetylcholine receptors (nAChRs) are ligand-gated ion channels that mediate fast synaptic transmission in the central and peripheral nervous systems. They are targets for the treatment of various neurological and psychiatric disorders including Alzheimer's disease, schizophrenia, and addiction. The compound's pyridine core provides a scaffold for the development of nAChR ligands. The bromine atom allows for further functionalization through cross-coupling reactions to introduce various substituents that can modulate receptor affinity and selectivity. The methoxy group can influence the compound's electronic properties and lipophilicity, potentially affecting its interactions with the receptor. The compound serves as a building block for the synthesis of nAChR ligands and other biologically active molecules targeting the central nervous system.
ln Vitro
In vitro, 5-bromo-2-methoxypyridine is used as a ligand for the central nicotinic acetylcholine receptor. It is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research. In medicinal chemistry, it serves as a building block for the synthesis of nAChR ligands and other CNS-targeting drug candidates. Its bromine atom allows for cross-coupling reactions such as Suzuki, Heck, and Buchwald-Hartwig couplings, enabling the introduction of various substituents. The methoxy group can be converted to other functional groups through demethylation and subsequent transformations. In organic synthesis, it is used as a versatile building block for creating complex molecules efficiently.
Enzyme Assay
Cell-free assays for 5-bromo-2-methoxypyridine are focused on its use as a chemical reagent. Standard protocols for cross-coupling reactions involving the compound include Suzuki coupling with boronic acids, Heck coupling with alkenes, and Buchwald-Hartwig amination with amines. These reactions are typically carried out with a palladium catalyst, a base, and an appropriate solvent at elevated temperatures under an inert atmosphere. The reaction progress is monitored by TLC or HPLC, and the products are purified by column chromatography. The compound's reactivity can be studied using various analytical techniques including NMR spectroscopy, mass spectrometry, and HPLC. Its use as a building block for pharmaceutical synthesis involves standard organic synthesis procedures.
Cell Assay
Cellular assays are not commonly performed with 5-bromo-2-methoxypyridine itself, as it is primarily a chemical intermediate rather than a bioactive compound. However, its derivatives, such as nAChR ligands, are evaluated in cell-based systems. For nAChR ligands, cell lines expressing nAChRs are treated with the derivatives, and receptor binding, ion flux, or other signaling endpoints are measured. The parent compound itself is not used as a test article in cell-based experiments due to its primary role as a synthetic building block.
Animal Protocol
Animal studies are not conducted with the parent compound 5-bromo-2-methoxypyridine. Its derivatives, such as nAChR ligands, are evaluated in animal models of neurological and psychiatric disorders. The parent compound itself is not administered to animals, as it is a synthetic intermediate. Toxicity and pharmacological profiles for the parent compound are inferred from related halogenated pyridine derivatives.
ADME/Pharmacokinetics
Pharmacokinetic data for 5-bromo-2-methoxypyridine are not available, as the compound is primarily a chemical intermediate rather than a drug candidate. With a molecular weight of 188.02 g/mol and appearing as a light yellow liquid, the compound would be expected to have moderate lipophilicity and membrane permeability if administered. However, comprehensive pharmacokinetic studies including absorption, distribution, metabolism, and excretion have not been performed, as the compound is not intended for therapeutic use. For research purposes, the compound is typically handled as a neat chemical and not administered to living organisms for pharmacokinetic profiling.
Additional Infomation
5-Bromo-2-methoxypyridine is a research chemical, not an approved drug. It has no clinical trial or marketing approval status for therapeutic use. The compound is a halogenated heterocyclic aromatic compound characterized by a bromine atom at the 5-position and a methoxy group at the 2-position on a pyridine ring. It is used as a ligand for the central nicotinic acetylcholine receptor. It is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research. The compound has a molecular weight of 188.02 g/mol, appears as a light yellow liquid, and has a boiling point of 80 °C at 12 mmHg and a density of 1.453 g/mL at 25 °C.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C6H6BRNO
Molecular Weight
188.02
Exact Mass
186.963
CAS #
13472-85-0
PubChem CID
2734895
Appearance
Colorless to light yellow liquid(Density:1.453 g/cm3)
Density
1.5±0.1 g/cm3
Boiling Point
197.0±20.0 °C at 760 mmHg
Melting Point
80ºC (12 mmHg)
Flash Point
72.9±21.8 °C
Vapour Pressure
0.5±0.4 mmHg at 25°C
Index of Refraction
1.543
LogP
2.61
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
1
Heavy Atom Count
9
Complexity
89.1
Defined Atom Stereocenter Count
0
SMILES
BrC1=CN=C(C=C1)OC
InChi Key
XADICJHFELMBGX-UHFFFAOYSA-N
InChi Code
InChI=1S/C6H6BrNO/c1-9-6-3-2-5(7)4-8-6/h2-4H,1H3
Chemical Name
5-bromo-2-methoxypyridine
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
View More

Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
View More

Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.3186 mL 26.5929 mL 53.1858 mL
5 mM 1.0637 mL 5.3186 mL 10.6372 mL
10 mM 0.5319 mL 2.6593 mL 5.3186 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us