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2-Bromo-5-fluoropyridine

Cat No.:V69014 Purity: ≥98%
2-Bromo-5-fluoropyridine is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
2-Bromo-5-fluoropyridine
2-Bromo-5-fluoropyridine Chemical Structure CAS No.: 41404-58-4
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
2-Bromo-5-fluoropyridine is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research.
2-Bromo-5-fluoropyridine (CAS#: 41404-58-4) is a halogenated pyridine derivative with the molecular formula C5H3BrFN and a molecular weight of 175.99 g/mol. It appears as a light yellow crystalline solid and is often stored under cold conditions. The compound is used in the synthesis of mGluR5 antagonist for the treatment of neuropathic pain. It is a biochemical compound that may be utilized as a biomaterial or organic/chemical reagent for biomedical research. The compound can be used in the synthesis of 5-fluoro-2-phenylpyridine via Suzuki coupling reaction with phenylboronic acid and 5-fluoro-2-(p-tolyl)pyridine. It is a key intermediate in the synthesis of many pyridine compounds and is an important starting material for the synthesis of various pharmaceuticals. The compound's dual halogen substitution (bromine and fluorine) provides useful reactive sites for cross-coupling reactions, enabling the development of more complex heterocyclic or bioactive compounds in medicinal chemistry.
Biological Activity I Assay Protocols (From Reference)
Targets
2-Bromo-5-fluoropyridine is a precursor for the synthesis of mGluR5 antagonists for the treatment of neuropathic pain. mGluR5 (metabotropic glutamate receptor 5) is a G protein-coupled receptor that plays a critical role in the modulation of synaptic transmission and plasticity. mGluR5 antagonists are being investigated for the treatment of various neurological and psychiatric disorders including neuropathic pain, anxiety, depression, and addiction. The compound serves as a building block for the construction of mGluR5 antagonists that target the receptor's orthosteric or allosteric binding sites. The compound's bromine atom allows for cross-coupling reactions to introduce various substituents, while the fluorine atom can influence pharmacokinetic properties and binding affinity. The compound is also a key intermediate in the synthesis of various pyridine-containing pharmaceuticals.
ln Vitro
In vitro, 2-bromo-5-fluoropyridine is used in the synthesis of mGluR5 antagonists for the treatment of neuropathic pain. It can be used in the synthesis of 5-fluoro-2-phenylpyridine via Suzuki coupling reaction with phenylboronic acid and 5-fluoro-2-(p-tolyl)pyridine. It is a key intermediate in the synthesis of many pyridine compounds and is an important starting material for the synthesis of various pharmaceuticals. In medicinal chemistry, it serves as a versatile building block for constructing biologically active molecules, particularly mGluR5 antagonists and other pyridine-containing drugs. Its bromine atom allows for cross-coupling reactions such as Suzuki, Heck, and Buchwald-Hartwig couplings, enabling the introduction of various substituents. The fluorine atom can enhance metabolic stability and modulate lipophilicity. In organic synthesis, it is used as a building block for creating complex molecules efficiently.
ln Vivo
In vivo activity is mediated through the derivatives of 2-bromo-5-fluoropyridine rather than the parent compound itself. mGluR5 antagonists synthesized from this compound are evaluated in animal models of neuropathic pain and other neurological disorders. In these studies, compounds are typically administered orally or intraperitoneally to rodents, and pain thresholds, behavioral responses, and other parameters are assessed. The parent compound itself is not administered in vivo, as it is a synthetic intermediate rather than a pharmacological agent.
Enzyme Assay
Cell-free assays for 2-bromo-5-fluoropyridine are focused on its use as a chemical reagent. Standard protocols for Suzuki coupling involve mixing the compound with a boronic acid (1.2 equivalents), a palladium catalyst (2-5 mol%), a base (e.g., K2CO3 or Cs2CO3), and a solvent (e.g., toluene, dioxane, or DMF) at elevated temperatures (80-120°C) under an inert atmosphere for 12-24 hours. The reaction progress is monitored by TLC, GC, or HPLC, and the products are purified by column chromatography. For the synthesis of mGluR5 antagonists, the compound is used as a starting material in multi-step synthetic routes. The compound's reactivity can be studied using various analytical techniques including NMR spectroscopy, mass spectrometry, and HPLC.
Cell Assay
Cellular assays are not performed with the parent compound 2-bromo-5-fluoropyridine. Instead, its derivatives, such as mGluR5 antagonists, are evaluated in cell-based systems. For mGluR5 antagonists, cell lines expressing mGluR5 are treated with the derivatives, and receptor binding, calcium flux, or other signaling endpoints are measured. The parent compound itself is not used as a test article in cell-based experiments due to its role as a synthetic building block.
Animal Protocol
Animal studies are not conducted with the parent compound 2-bromo-5-fluoropyridine. Its derivatives, such as mGluR5 antagonists, are evaluated in animal models of neuropathic pain and other neurological disorders. The parent compound itself is not administered to animals, as it is a synthetic intermediate. Toxicity and pharmacological profiles for the parent compound are inferred from related halogenated pyridine derivatives.
ADME/Pharmacokinetics
Pharmacokinetic data for 2-bromo-5-fluoropyridine are not available, as the compound is primarily a chemical intermediate rather than a drug candidate. With a molecular weight of 175.99 g/mol and appearing as a light yellow crystalline solid, the compound would be expected to have moderate lipophilicity and membrane permeability if administered. However, comprehensive pharmacokinetic studies including absorption, distribution, metabolism, and excretion have not been performed, as the compound is not intended for therapeutic use. For research purposes, the compound is typically handled as a neat chemical and not administered to living organisms for pharmacokinetic profiling.
Additional Infomation
2-Bromo-5-fluoropyridine is a research chemical, not an approved drug. It has no clinical trial or marketing approval status for therapeutic use. The compound is used in the synthesis of mGluR5 antagonists for the treatment of neuropathic pain. It can be used in the synthesis of 5-fluoro-2-phenylpyridine via Suzuki coupling reaction with phenylboronic acid and 5-fluoro-2-(p-tolyl)pyridine. It is a key intermediate in the synthesis of many pyridine compounds and is an important starting material for the synthesis of various pharmaceuticals. The compound has a molecular weight of 175.99 g/mol and appears as a light yellow crystalline solid. It should be stored under cold conditions.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C5H3BRFN
Molecular Weight
175.99
Exact Mass
174.943
CAS #
41404-58-4
PubChem CID
2783171
Appearance
Colorless to off-white <30°C powder,>31°C liquid
Density
1.7±0.1 g/cm3
Boiling Point
171.6±20.0 °C at 760 mmHg
Melting Point
30-31ºC
Flash Point
57.6±21.8 °C
Vapour Pressure
1.8±0.3 mmHg at 25°C
Index of Refraction
1.534
LogP
1.51
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
0
Heavy Atom Count
8
Complexity
78.8
Defined Atom Stereocenter Count
0
SMILES
C1=C(C=NC(=C1)Br)F
InChi Key
UODINHBLNPPDPD-UHFFFAOYSA-N
InChi Code
InChI=1S/C5H3BrFN/c6-5-2-1-4(7)3-8-5/h1-3H
Chemical Name
2-bromo-5-fluoropyridine
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 5.6821 mL 28.4107 mL 56.8214 mL
5 mM 1.1364 mL 5.6821 mL 11.3643 mL
10 mM 0.5682 mL 2.8411 mL 5.6821 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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