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3,3-Difluoroazetidine hydrochloride

Cat No.:V68637 Purity: ≥98%
3,3-Difluoroazetidine HCl is a biochemical compound that could be utilized as a biomaterial or organic/chemical reagent for biomedical research.
3,3-Difluoroazetidine hydrochloride
3,3-Difluoroazetidine hydrochloride Chemical Structure CAS No.: 288315-03-7
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
3,3-Difluoroazetidine HCl is a biochemical compound that could be utilized as a biomaterial or organic/chemical reagent for biomedical research.
3,3-Difluoroazetidine hydrochloride (CAS 288315-03-7) is an azetidine compound with the molecular formula C3H6ClF2N and a molecular weight of 129.54 g/mol. This compound is used in the preparation of dihydropyrimidine compounds as antiviral agents. It is also described as a fluorescent compound and a potential cancer drug, functioning as an inhibitor of tyrosine kinase, an enzyme involved in the signaling pathway for cell growth and division. The compound serves as a biochemical reagent for life science research and as a sulfonylation reagent for organic synthesis and drug discovery.
Biological Activity I Assay Protocols (From Reference)
Targets
3,3-Difluoroazetidine hydrochloride is reported to be an inhibitor of tyrosine kinase, an enzyme involved in the signaling pathway for growth and division of cells. By inhibiting tyrosine kinase activity, the compound may interfere with cell proliferation signals, making it a potential cancer therapeutic agent. The difluoroazetidine scaffold is a valuable pharmacophore in medicinal chemistry for improving drug properties such as metabolic stability and membrane permeability. The specific kinase targets have not been fully characterized.
ln Vitro
In vitro, 3,3-difluoroazetidine hydrochloride has been reported as a potential cancer drug with tyrosine kinase inhibitory activity. As a fluorescent compound, it may be useful for imaging applications. It is also used in the synthesis of dihydropyrimidine compounds with antiviral activity. Detailed in vitro potency data against specific cancer cell lines or kinases are not readily available in the public domain. The compound's primary value is as a building block for drug discovery.
ln Vivo
In vivo data for 3,3-difluoroazetidine hydrochloride are limited as it is primarily a chemical intermediate and research reagent. While it has been mentioned as a potential cancer drug, detailed animal studies evaluating its in vivo efficacy, pharmacokinetics, and safety have not been published in the available literature. The compound's applications in vivo are likely limited to its use as a synthetic intermediate for drug candidates.
Enzyme Assay
Cell-free enzyme assays for 3,3-difluoroazetidine hydrochloride would typically involve testing its inhibitory activity against purified tyrosine kinases. Assays are performed in buffer systems (e.g., Tris-HCl, pH 7.4, containing ATP and Mg²⁺) with a peptide substrate. Kinase activity is measured by detecting phosphorylated substrate using radioactive (³²P-ATP) or fluorescence-based methods. Inhibitory potency (IC50) is determined from dose-response curves. Controls include enzyme alone and vehicle controls.
Cell Assay
For cell-based studies, 3,3-difluoroazetidine hydrochloride and its derivatives are tested in cancer cell lines (e.g., A549, HeLa, or MCF-7) cultured in DMEM or RPMI-1640 with 10% FBS. Cells are treated with varying concentrations of the test compound for 24–72 hours. Cell viability is assessed by MTT or CCK-8 assays. Apoptosis is evaluated by flow cytometry (Annexin V/PI staining). Tyrosine kinase inhibition is confirmed by western blotting for phosphorylated downstream targets. Vehicle controls (DMSO) are included.
Animal Protocol
In vivo studies with 3,3-difluoroazetidine hydrochloride derivatives may involve administration to tumor-bearing mice via oral gavage or intraperitoneal injection. Tumor growth inhibition, survival, body weight, and hematological parameters are monitored. Pharmacokinetic parameters (Cmax, AUC, half-life) are determined from plasma samples. Tissue distribution and toxicity are assessed by histopathology. All procedures follow institutional animal care guidelines.
ADME/Pharmacokinetics
3,3-Difluoroazetidine hydrochloride is a synthetic chemical compound and is not subject to comprehensive pharmacokinetic evaluation as a drug. Its physicochemical properties include a molecular weight of 129.54 g/mol. The compound is stable under normal storage conditions and is available in high purity (≥97%). The difluoroazetidine ring is a valuable scaffold in medicinal chemistry, often used to improve metabolic stability and modulate physicochemical properties of drug candidates.
Toxicity/Toxicokinetics
The toxicological profile of 3,3-difluoroazetidine hydrochloride has not been extensively characterized. Standard laboratory safety precautions should be observed when handling this compound, including the use of personal protective equipment (gloves, goggles, lab coat) and adequate ventilation. It may cause skin, eye, and respiratory tract irritation. Ingestion or inhalation should be avoided. Appropriate first-aid measures should be in place.
Additional Infomation
3,3-Difluoroazetidine hydrochloride is not a drug but a valuable chemical intermediate and research reagent. It is used in the preparation of dihydropyrimidine compounds as antiviral agents. The compound has been described as a potential cancer drug and tyrosine kinase inhibitor. Its difluoroazetidine scaffold is a valuable pharmacophore in medicinal chemistry, often incorporated into drug candidates to improve metabolic stability and membrane permeability. It is also used as a fluorescent compound for imaging applications. It is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C3H6CLF2N
Molecular Weight
129.54
Exact Mass
129.015
CAS #
288315-03-7
PubChem CID
2758247
Appearance
White to off-white solid powder
Melting Point
138-143 °C
LogP
1.355
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
3
Rotatable Bond Count
0
Heavy Atom Count
7
Complexity
55.8
Defined Atom Stereocenter Count
0
SMILES
Cl.FC1(CNC1)F
InChi Key
CDBAEFXTCRKJPZ-UHFFFAOYSA-N
InChi Code
InChI=1S/C3H5F2N.ClH/c4-3(5)1-6-2-3;/h6H,1-2H2;1H
Chemical Name
3,3-difluoroazetidine;hydrochloride
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 7.7196 mL 38.5981 mL 77.1962 mL
5 mM 1.5439 mL 7.7196 mL 15.4392 mL
10 mM 0.7720 mL 3.8598 mL 7.7196 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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