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7-Amino-4-methylcoumarin-3-acetic acid (7-Amino-4-methyl-3-coumarin acetic acid)

Cat No.:V67427 Purity: ≥98%
7-Amino-4-methylcoumarin-3-acetic acid is a fluorescent protein labeling agent.
7-Amino-4-methylcoumarin-3-acetic acid (7-Amino-4-methyl-3-coumarin acetic acid)
7-Amino-4-methylcoumarin-3-acetic acid (7-Amino-4-methyl-3-coumarin acetic acid) Chemical Structure CAS No.: 106562-32-7
Product category: Fluorescent Dye
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
7-Amino-4-methylcoumarin-3-acetic acid is a fluorescent protein labeling agent. 7-Amino-4-methylcoumarin-3-acetic acid emits light in the blue region (440-460 nm) when activated by UV light (350 nm).
7-Amino-4-methylcoumarin-3-acetic acid (AMCA) (CAS#: 106562-32-7) is a small-molecule blue fluorophore belonging to the aminocoumarin class. The compound has a molecular formula of C₁₂H₁₁NO₄ and a molecular weight of 233.22 g/mol. AMCA appears as a light yellow to brown powder to crystal. The compound serves as a foundational reagent for the synthesis of amine-reactive fluorescent probes via its N-hydroxysuccinimide (NHS) ester derivative. AMCA emits in the blue region (440-460 nm) upon activation with UV light (350 nm). The compound should be stored at room temperature in a cool and dark place.
Biological Activity I Assay Protocols (From Reference)
Targets
The carboxylic acid group of AMCA provides a reactive site for conjugation to amines through carbodiimide-mediated coupling reactions or NHS ester formation. The compound does not target specific enzymes or receptors but serves as a fluorescent labeling reagent.
ln Vitro
AMCA is a fluorescent protein labeling agent that emits in the blue region (440-460 nm) upon activation with UV light (350 nm). The compound's NHS ester derivative reacts with lysine residues to form photostable amide links. The blue fluorescence provides distinct spectral properties for multiplexing with other fluorophores.
ln Vivo
No significant in vivo activity data has been reported for AMCA as a therapeutic agent, as the compound is primarily utilized as a fluorescent labeling reagent for research applications. The compound is intended for research use only.
Enzyme Assay
In vitro labeling assays for AMCA involve converting the carboxylic acid to an NHS ester and incubating with amine-containing biomolecules. The NHS ester reacts with lysine residues to form photostable amide links. Labeling efficiency can be assessed by measuring the fluorescence intensity of the conjugated product.
Cell Assay
For in vitro cellular experiments, AMCA is conjugated to antibodies, proteins, or other targeting ligands via the carboxylic acid group or NHS ester. The labeled conjugates are then added to cell culture medium for incubation with target cells. After washing, cells are analyzed by fluorescence microscopy. The blue fluorescence is activated by UV light.
Animal Protocol
In vivo animal experiments with AMCA are not typically performed as a therapeutic intervention. However, the dye can be used for in vivo imaging applications when conjugated to targeting ligands. The blue fluorescence provides distinct spectral properties. Conjugates bearing AMCA can be administered to animal models for tracking biodistribution.
ADME/Pharmacokinetics
Pharmacokinetic properties of AMCA have not been characterized, as the compound is a research-use fluorescent labeling reagent rather than a drug candidate. The compound has a molecular weight of 233.22 g/mol and a molecular formula of C₁₂H₁₁NO₄. It should be stored at room temperature in a cool and dark place.
Toxicity/Toxicokinetics
Toxicological data for AMCA has not been systematically evaluated, as the compound is intended for research applications only and not for therapeutic use. Standard laboratory safety precautions should be observed when handling this chemical reagent.
References

[1]. Aminomethyl coumarin acetic acid: a new fluorescent labelling agent for proteins. Histochem J. 1986;18(9):497-499.

Additional Infomation
7-Amino-4-methylcoumarin-3-acetic acid (AMCA) is a small-molecule blue fluorophore belonging to the aminocoumarin class. The compound serves as a foundational reagent for the synthesis of amine-reactive fluorescent probes via its NHS ester derivative. AMCA emits in the blue region (440-460 nm) upon activation with UV light (350 nm). The compound has no clinical or therapeutic applications and has not received regulatory approval.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C12H11NO4
Molecular Weight
233.22
Exact Mass
233.069
CAS #
106562-32-7
PubChem CID
129367
Appearance
Off-white to light brown solid powder
Density
1.391g/cm3
Boiling Point
512.2ºC at 760mmHg
Flash Point
263.6ºC
Vapour Pressure
2.58E-11mmHg at 25°C
Index of Refraction
1.629
LogP
1.891
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
2
Heavy Atom Count
17
Complexity
388
Defined Atom Stereocenter Count
0
SMILES
CC1=C(C(=O)OC2=C1C=CC(=C2)N)CC(=O)O
InChi Key
QEQDLKUMPUDNPG-UHFFFAOYSA-N
InChi Code
InChI=1S/C12H11NO4/c1-6-8-3-2-7(13)4-10(8)17-12(16)9(6)5-11(14)15/h2-4H,5,13H2,1H3,(H,14,15)
Chemical Name
2-(7-amino-4-methyl-2-oxochromen-3-yl)acetic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 125 mg/mL (535.97 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.2878 mL 21.4390 mL 42.8780 mL
5 mM 0.8576 mL 4.2878 mL 8.5756 mL
10 mM 0.4288 mL 2.1439 mL 4.2878 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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