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2,5-Difluorophenylboronic acid

Cat No.:V65648 Purity: ≥98%
2,5-Difluorophenylboronic acid is a biochemical compound that could be utilized as a biomaterial or organic/chemical reagent for biomedical research.
2,5-Difluorophenylboronic acid
2,5-Difluorophenylboronic acid Chemical Structure CAS No.: 193353-34-3
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
2,5-Difluorophenylboronic acid is a biochemical compound that could be utilized as a biomaterial or organic/chemical reagent for biomedical research.
2,5-Difluorophenylboronic acid (CAS 193353-34-3) is a difluorinated arylboronic acid building block with molecular formula C₆H₅BF₂O₂ and molecular weight 157.91 g/mol. It appears as a white to light yellow crystalline solid with a typical melting point of 105-110°C. This compound serves as a key intermediate in palladium-catalyzed Suzuki-Miyaura cross-coupling reactions to introduce a 2,5-difluorophenyl moiety into molecular scaffolds. It is utilized as a biochemical reagent for biomedical research.
Biological Activity I Assay Protocols (From Reference)
Targets
2,5-Difluorophenylboronic acid does not have a defined pharmacological target as it is a synthetic reagent and building block. However, it serves as a key intermediate in the preparation of selective sphingosine phosphate receptor antagonists. The specific 2,5-difluoro substitution pattern is critical for target engagement and metabolic stability optimization in pharmaceutical candidates. Its primary function is to enable the construction of complex organic molecules via cross-coupling reactions.
ln Vitro
No specific in vitro pharmacological activity data are available for 2,5-Difluorophenylboronic acid as it is a synthetic intermediate. Its activity is assessed in terms of chemical reactivity and synthetic utility rather than direct biological activity. The compound is widely employed in Suzuki-Miyaura cross-coupling reactions, where its performance is evaluated by coupling yields and selectivity. It serves as a reactant for preparing various pharmaceutical intermediates.
ln Vivo
No specific in vivo pharmacological activity data have been documented for 2,5-Difluorophenylboronic acid, as it is not a therapeutic agent. The compound is used exclusively in chemical synthesis and is not administered to animals for pharmacological evaluation. Its applications are limited to organic chemistry and drug discovery research laboratories.
Enzyme Assay
For non-cellular assays, 2,5-Difluorophenylboronic acid is characterized by standard analytical techniques including NMR, HPLC, and mass spectrometry to confirm identity and purity. The compound can be evaluated in Suzuki-Miyaura cross-coupling reactions as a boronic acid partner. Typical protocols involve reacting the boronic acid with an aryl halide in the presence of a palladium catalyst and base. Reaction progress is monitored by TLC or HPLC. Purity is typically ≥95%.
Cell Assay
For in vitro cell-based studies, 2,5-Difluorophenylboronic acid is not typically used as a direct test compound. It is a building block for synthesizing biologically active molecules that are subsequently tested in cell-based assays. If handled in a biological laboratory context, standard safety precautions should be taken. The compound should be stored in a cool, dry place protected from light and moisture.
Animal Protocol
For in vivo animal studies, 2,5-Difluorophenylboronic acid is not administered directly as a test compound. It is used in chemical synthesis to produce pharmaceutical candidates that are subsequently evaluated in animal models. The compound can be formulated using vehicles such as DMSO:PEG300:Tween 80:Saline (10:40:5:45) if required for specific research protocols.
ADME/Pharmacokinetics
2,5-Difluorophenylboronic acid has a molecular weight of 157.91 g/mol and formula C₆H₅BF₂O₂. It has a melting point of 105-110°C, a LogP of 1.73, and 2 hydrogen bond donors. The compound contains varying amounts of the corresponding boroxine anhydride, which can alter its physical state. Storage: powder at -20°C for up to 3 years; in solvent at -80°C for up to 1 year. Shipping: ambient temperature.
Toxicity/Toxicokinetics
2,5-Difluorophenylboronic acid is for research use only and not for human consumption. Standard laboratory safety practices should be followed when handling this chemical. Boronic acids are generally considered to have low acute toxicity, but specific LD₅₀ values have not been extensively reported. Appropriate personal protective equipment including gloves and safety glasses should be worn. The compound is classified as a combustible solid.
Additional Infomation
2,5-Difluorophenylboronic acid (CAS 193353-34-3) is also known as (2,5-difluorophenyl)boronic acid. It is a difluorinated arylboronic acid building block widely employed in Suzuki-Miyaura cross-coupling reactions. The compound serves as a key intermediate in the preparation of selective sphingosine phosphate receptor antagonists and other pharmaceutical candidates. No clinical trials or therapeutic approvals exist for the parent compound.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C6H5BF2O2
Molecular Weight
157.91
Exact Mass
158.035
CAS #
193353-34-3
PubChem CID
2734335
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Boiling Point
271.3±50.0 °C at 760 mmHg
Melting Point
105-110 °C(lit.)
Flash Point
117.9±30.1 °C
Vapour Pressure
0.0±0.6 mmHg at 25°C
Index of Refraction
1.486
LogP
1.76
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
1
Heavy Atom Count
11
Complexity
134
Defined Atom Stereocenter Count
0
SMILES
B(C1=C(C=CC(=C1)F)F)(O)O
InChi Key
KTOJGSDLJNUAEP-UHFFFAOYSA-N
InChi Code
InChI=1S/C6H5BF2O2/c8-4-1-2-6(9)5(3-4)7(10)11/h1-3,10-11H
Chemical Name
(2,5-difluorophenyl)boronic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 6.3327 mL 31.6636 mL 63.3272 mL
5 mM 1.2665 mL 6.3327 mL 12.6654 mL
10 mM 0.6333 mL 3.1664 mL 6.3327 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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