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(2S)-Gemcitabine-13C,15N2 hydrochloride

Cat No.:V65026 Purity: ≥98%
(2S)-Gemcitabine-13C,15N2 (HCl) is 13C and 15 N labeled (2S)-Gemcitabine HCl.
(2S)-Gemcitabine-13C,15N2 hydrochloride
(2S)-Gemcitabine-13C,15N2 hydrochloride Chemical Structure CAS No.: 1262897-74-4
Product category: Isotope-Labeled Compounds
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
Other Sizes

Other Forms of (2S)-Gemcitabine-13C,15N2 hydrochloride:

  • 1'-epi Gemcitabine hydrochloride (1'-epi LY 188011 hydrochloride)
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
(2S)-Gemcitabine-13C,15N2 (HCl) is 13C and 15 N labeled (2S)-Gemcitabine HCl.
(2S)-Gemcitabine-13C,15N2 hydrochloride is the stable isotope-labeled form of the chemotherapy drug Gemcitabine, where specific carbon and nitrogen atoms are replaced with 13C and 15N. This labeled analog is used as an internal standard for the precise quantification of Gemcitabine and its active metabolites in biological matrices by LC-MS/MS for pharmacokinetic and therapeutic drug monitoring (TDM) applications in oncology.
Biological Activity I Assay Protocols (From Reference)
Targets
The unlabeled parent drug, Gemcitabine, targets DNA polymerases and ribonucleotide reductase. It is a nucleoside analog that is incorporated into DNA during replication, leading to chain termination and cell death. The labeled analog serves as an analytical internal standard and does not exert any pharmacological activity.
ln Vitro
Drug compounds have included stable heavy isotopes of carbon, hydrogen, and other elements, mostly as quantitative tracers while the drugs were being developed. Because deuteration may have an effect on a drug's pharmacokinetics and metabolic properties, it is a cause for concern [1].
In cell-free assays, (2S)-Gemcitabine-13C,15N2 hydrochloride does not exhibit any biological activity of its own. The unlabeled parent drug is a potent inhibitor of DNA synthesis. The labeled standard is used to support the analysis of the unlabeled drug, allowing researchers to study its metabolism and uptake.
ln Vivo
The labeled analog is not used for direct in vivo activity studies. The unlabeled parent drug, Gemcitabine, is a standard-of-care chemotherapy agent used to treat various solid tumors. The labeled internal standard is used in in vivo PK studies to quantify the concentration of the parent drug in the blood of animals or patients receiving the unlabeled drug.
Enzyme Assay
A typical LC-MS/MS protocol involves spiking a known amount of the labeled internal standard into a plasma or tissue homogenate sample. The sample is processed (protein precipitation with acetonitrile/methanol) and analyzed. The signal from the internal standard is used to normalize the signal from the unlabeled Gemcitabine, correcting for any variation in sample preparation or instrument performance.
Cell Assay
This compound is not used for direct cell-based experiments for its own activity. In a cellular pharmacology study, cancer cells are treated with unlabeled Gemcitabine. The cells are then lysed, and the labeled internal standard is added to the lysate to quantify how much of the unlabeled drug has been taken up by the cells or incorporated into their DNA using LC-MS/MS.
Animal Protocol
In an in vivo PK study, tumor-bearing mice are administered unlabeled Gemcitabine (e.g., by IP injection). Blood samples are collected via tail vein at various time points. The labeled internal standard is added to the plasma samples. The concentration of Gemcitabine is then determined by LC-MS/MS to calculate its half-life, clearance, and distribution in the body.
ADME/Pharmacokinetics
As an analytical standard, (2S)-Gemcitabine-13C,15N2 hydrochloride is not used for its own PK profile. For bioanalytical use, it is typically formulated as a stock solution in a suitable solvent (e.g., water, methanol, or DMSO) at a concentration of 1 mg/mL. Working solutions for spiking are prepared by diluting the stock with water or mobile phase.
Toxicity/Toxicokinetics
Toxicity for the labeled standard is not a consideration at the trace analytical concentrations used. The unlabeled parent drug, Gemcitabine, is a potent cytotoxic agent with significant side effects, including myelosuppression (low blood counts) and hepatotoxicity. Standard safety precautions for handling cytotoxic chemotherapeutic agents must be used.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019 Feb;53(2):211-216.

Additional Infomation
(2S)-Gemcitabine-13C,15N2 hydrochloride is an isotope-labeled internal standard (SIL-IS) for the anti-cancer agent gemcitabine. The use of a stable isotope-labeled internal standard is critical for supporting regulatory bioanalysis and for the precise determination of drug concentrations during the development of oncology drugs. This product is for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C813CH12CLF2N15N2O4
Molecular Weight
302.64
Exact Mass
302.045
CAS #
1262897-74-4
Related CAS #
1'-epi Gemcitabine hydrochloride;122111-05-1
PubChem CID
129010188
Appearance
Typically exists as solid at room temperature
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
2
Heavy Atom Count
19
Complexity
426
Defined Atom Stereocenter Count
3
SMILES
Cl.FC1([C@@H]([15N]2[13C]([15N]=C(C=C2)N)=O)O[C@H](CO)[C@H]1O)F
InChi Key
OKKDEIYWILRZIA-YUECSCTESA-N
InChi Code
InChI=1S/C9H11F2N3O4.ClH/c10-9(11)6(16)4(3-15)18-7(9)14-2-1-5(12)13-8(14)17;/h1-2,4,6-7,15-16H,3H2,(H2,12,13,17);1H/t4-,6-,7+;/m1./s1/i8+1,13+1,14+1;
Chemical Name
4-amino-1-[(2S,4R,5R)-3,3-difluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl](213C,1,3-15N2)pyrimidin-2-one;hydrochloride
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.3043 mL 16.5213 mL 33.0426 mL
5 mM 0.6609 mL 3.3043 mL 6.6085 mL
10 mM 0.3304 mL 1.6521 mL 3.3043 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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