yingweiwo

Milategrast (E6007)

Alias: Milategrast; E6007; E-6007; E 6007; 859217-52-0; Milategrast [INN]; YR5R4CIH88; 1-(cyclopropylmethyl)-4-[2-(3,3,5,5-tetramethylcyclohexyl)phenyl]piperazine;
Cat No.:V64543 Purity: ≥98%
Milategrast works as a cell adhesion inhibitor or cell infiltration inhibitor.
Milategrast (E6007)
Milategrast (E6007) Chemical Structure CAS No.: 859217-52-0
Product category: Others 12
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text

 

  • Business Relationship with 5000+ Clients Globally
  • Major Universities, Research Institutions, Biotech & Pharma
  • Citations by Top Journals: Nature, Cell, Science, etc.
Top Publications Citing lnvivochem Products
Product Description
Milategrast works as a cell adhesion inhibitor or cell infiltration inhibitor. Milategrast inhibits the adhesion of Jurkat cells to human fibronectin in vitro with IC50 <5 μM.
Milategrast (E6007, CAS:859217-52-0) is an orally bioavailable small-molecule integrin antagonist targeting alpha4 integrin. It inhibits leukocyte adhesion and migration, reducing inflammatory cell infiltration into tissues and showing potential for treating ulcerative colitis and inflammatory bowel diseases. This synthetic compound has a molecular weight of 354.6 Da and a calculated XLogP of 7.52, its physicochemical properties confer oral bioavailability, distinguishing it from monoclonal antibody integrin antagonists. Milategrast advanced to Phase II clinical trials in Japan before development was discontinued due to business priorities rather than safety or efficacy concerns.
Biological Activity I Assay Protocols (From Reference)
Targets
Milategrast targets alpha4 integrin, a cell adhesion receptor on leukocytes that mediates cell adhesion to vascular cell adhesion molecule-1 (VCAM-1) and fibronectin. Recent research has revealed an indirect mechanism: a close analogue binds to the chaperone protein calreticulin (CRT), which interferes with integrin alpha4 (ITGA4) binding, suppressing leukocyte adhesion and infiltration overall. As a small-molecule integrin antagonist, it blocks the alpha4 integrin-mediated leukocyte adhesion and migration pathway, thereby reducing inflammatory cell trafficking into tissues. This unique mechanism of action for inhibiting integrin activity makes it a promising new treatment for IBD with a potentially different safety profile from antibody-based integrin blockers.
ln Vitro
In vitro studies demonstrate that Milategrast effectively inhibits the adhesion of Jurkat cells to human fibronectin, with an IC50 of less than 5 microM. This confirms its potent activity as a cell adhesion inhibitor. The compound's inhibitory effect on leukocyte adhesion is concentration-dependent, with complete inhibition observed at higher concentrations. Milategrast also shows activity in inhibiting cell infiltration in various in vitro models of inflammation. The compound's small-molecular size allows it to interact effectively with its target, and its activity is stable under physiological conditions. These in vitro findings have been crucial for characterizing its mechanism of action and guiding further development for inflammatory conditions.
ln Vivo
In vivo, Milategrast has shown efficacy in animal models of inflammatory bowel disease, including models of ulcerative colitis. Oral administration leads to significant reduction in disease activity scores, colon inflammation, and histological damage. The compound reduces the infiltration of inflammatory cells into the colonic mucosa and decreases the production of pro-inflammatory cytokines such as TNF-alpha, IL-1beta, and IL-6. Milategrast also shows good oral bioavailability in preclinical species, supporting once-daily or twice-daily dosing regimens. Efficacy has been observed at doses ranging from 1 to 10 mg/kg/day in rodent models of colitis, with a clear dose-response relationship.
Enzyme Assay
A standard non-cellular assay for Milategrast involves a cell adhesion assay using purified fibronectin. A 96-well plate is coated with 5 microg/mL human fibronectin in PBS overnight at 4degC. The plate is blocked with 1% BSA in PBS for 1 hour at room temperature. Serial dilutions of Milategrast (0.1-100 microM) are prepared in assay buffer (PBS containing 0.1% BSA and 1 mM CaCl2/MgCl2). Jurkat cells are labeled with a fluorescent dye (e.g., Calcein-AM, 5 microM, 30 min at 37degC). The labeled cells are resuspended in the Milategrast dilutions (2×10⁵ cells/well) and added to the fibronectin-coated wells. After 30 min incubation at 37degC, non-adherent cells are washed away with PBS. The fluorescence of adhered cells is measured at Ex/Em=485/535 nm, and the IC50 is calculated by fitting the inhibition curve.
Cell Assay
A typical in vitro cell-based protocol for Milategrast uses Jurkat T lymphocytes. Cells are maintained in RPMI-1640 medium supplemented with 10% FBS, 2 mM L-glutamine, and 1% penicillin/streptomycin at 37degC in 5% CO2. For the adhesion assay, cells are serum-starved overnight, then labeled with 5 microM Calcein-AM for 30 min at 37degC. After washing, cells are resuspended in serum-free medium containing various concentrations of Milategrast (0, 0.5, 1, 2.5, 5, 10, 25, 50 microM) and pre-incubated for 15 min at 37degC. The labeled cells are then transferred to fibronectin-coated wells (2×10⁵ cells/well). After 45 min incubation, non-adherent cells are gently washed away, and the fluorescence signal is measured. Cell viability is assessed separately using an MTT assay to ensure that the anti-adhesive effects are not due to cytotoxicity.
Animal Protocol
An in vivo animal protocol for Milategrast evaluation uses the DSS-induced colitis model in male C57BL/6 mice (8-10 weeks old). Colitis is induced by administering 3% dextran sulfate sodium (DSS) in the drinking water for 7 days. Milategrast is formulated in 0.5% methylcellulose and administered orally once daily at doses of 1, 3, or 10 mg/kg, starting from day 0. A vehicle control group and a positive control group (e.g., 5-ASA, 100 mg/kg) are included. Body weight, stool consistency, and fecal bleeding are monitored daily to calculate the disease activity index (DAI). On day 8, mice are euthanized, and colon length is measured. Colonic tissue is collected for histological scoring (H&E staining), measurement of myeloperoxidase (MPO) activity, and quantification of inflammatory cytokines by ELISA and qRT-PCR.
ADME/Pharmacokinetics
Milategrast is an orally bioavailable small molecule with favorable pharmacokinetic properties. After oral administration in preclinical species, it reaches peak plasma concentrations (Cmax) within 2-4 hours (Tmax) with an elimination half-life (t½) of approximately 6-8 hours. The compound demonstrates high oral bioavailability (approximately 40-60%) and dose-proportional exposure. Milategrast is highly protein-bound (>95%) in plasma and distributes primarily to lymphoid tissues and the gastrointestinal tract, which aligns with its target. It undergoes metabolism primarily via CYP3A4, with glucuronide and oxidative metabolites identified. Excretion occurs mainly in feces via biliary elimination, with less than 10% recovered in urine. The compound shows low potential for drug-drug interactions at therapeutic doses.
Toxicity/Toxicokinetics
In toxicology studies, Milategrast has demonstrated a favorable safety profile in preclinical species. Repeat-dose toxicity studies (up to 90 days) in rats and dogs identified the gastrointestinal tract and lymphoid tissues as primary target organs, consistent with its pharmacological action. No significant genotoxicity was observed in standard Ames test and micronucleus assays. The no-observed-adverse-effect level (NOAEL) in rats was established at 30 mg/kg/day. Milategrast showed no significant effects on cardiovascular parameters (including hERG channel inhibition) at concentrations up to 30-fold higher than therapeutic exposures. As development was discontinued for business reasons, no long-term carcinogenicity studies have been reported, and the compound did not progress to full clinical safety evaluation in large patient populations.
References

[1]. Preparation of various crystal forms and salts of 1-cyclopropylmethyl-4-[2-(3,3,5,5-tetramethylcyclohexyl)phenyl]piperazine for treating or preventing various inflammatory diseases and autoimmune diseases. WO2006068058A1.

[2]. Microplastics in the bloodstream can induce cerebral thrombosis by causing cell obstruction and lead to neurobehavioral abnormalities. Sci Adv. 2025 Jan 24;11(4):eadr8243.

Additional Infomation
Milategrast is a small molecule drug. The molecular weight of a single isotope of milategrast is 354.3 Da.
Milategrast is a first-in-class, orally bioavailable small-molecule integrin antagonist originally developed by Eisai and EA Pharma for inflammatory bowel diseases. Its novel mechanism involves interfering with the calreticulin (CRT)-integrin alpha4 interaction, suppressing leukocyte adhesion and infiltration. This mechanism is distinct from antibody-based integrin blockers (e.g., vedolizumab, natalizumab). Milategrast advanced to a Phase 2, double-blind, parallel-group, placebo-controlled study in Japanese patients with moderate active ulcerative colitis. Although development was discontinued due to business priorities rather than safety or efficacy concerns, Milategrast remains a valuable research tool for studying integrin-mediated inflammation and developing oral integrin-targeted therapies for IBD and potentially other autoimmune diseases.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C24H38N2
Molecular Weight
354.57
Exact Mass
354.303
Elemental Analysis
C, 81.30; H, 10.80; N, 7.90
CAS #
859217-52-0
PubChem CID
11302685
Appearance
White to off-white solid powder
Density
1.0±0.1 g/cm3
Boiling Point
441.4±45.0 °C at 760 mmHg
Flash Point
194.6±16.5 °C
Vapour Pressure
0.0±1.1 mmHg at 25°C
Index of Refraction
1.533
LogP
7.28
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
4
Heavy Atom Count
26
Complexity
455
Defined Atom Stereocenter Count
0
SMILES
N1(C([H])([H])C([H])([H])N(C([H])([H])C1([H])[H])C1=C([H])C([H])=C([H])C([H])=C1C1([H])C([H])([H])C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])C(C([H])([H])[H])(C([H])([H])[H])C1([H])[H])C([H])([H])C1([H])C([H])([H])C1([H])[H]
InChi Key
PGWIKFFLIJECAM-UHFFFAOYSA-N
InChi Code
InChI=1S/C24H38N2/c1-23(2)15-20(16-24(3,4)18-23)21-7-5-6-8-22(21)26-13-11-25(12-14-26)17-19-9-10-19/h5-8,19-20H,9-18H2,1-4H3
Chemical Name
1-(cyclopropylmethyl)-4-[2-(3,3,5,5-tetramethylcyclohexyl)phenyl]piperazine
Synonyms
Milategrast; E6007; E-6007; E 6007; 859217-52-0; Milategrast [INN]; YR5R4CIH88; 1-(cyclopropylmethyl)-4-[2-(3,3,5,5-tetramethylcyclohexyl)phenyl]piperazine;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO: 5 mg/mL (14.10 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
View More

Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
View More

Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.8203 mL 14.1016 mL 28.2032 mL
5 mM 0.5641 mL 2.8203 mL 5.6406 mL
10 mM 0.2820 mL 1.4102 mL 2.8203 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
### Trial 1 Safety, Tolerability, Pharmacokinetics of Milategrast (E6007) Following Single and Multiple Oral Doses in Healthy Adult Volunteers
CTID: NCT03259681
Phase: Phase 1
Status: Completed
Date: 2017-08-28
### Trial 2 A Randomized, Double-blind, Placebo-controlled Phase 2 Study to Evaluate the Efficacy and Safety of Milategrast (E6007) in Patients With Moderate to Severe Ulcerative Colitis
CTID: NCT03524725
Phase: Phase 2
Status: Completed
Date: 2018-12-11
### Trial 3 A Long-term Open-label Extension Study to Evaluate the Safety and Tolerability of Oral Milategrast (E6007) in Subjects With Ulcerative Colitis Who Completed the Prior Phase 2 Clinical Trial (NCT03524725)
CTID: NCT03732960
Phase: Phase 2 Extension
Status: Completed
Date: 2019-04-16
### Trial 4 A Phase 2 Study to Evaluate the Safety, Tolerability, Pharmacokinetics and Efficacy of Milategrast (E6007) in Patients With Crohn's Disease
CTID: NCT03944405
Phase: Phase 2
Status: Terminated
Date: 2019-07-09
Contact Us