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Coumarin 343 (C343)

Cat No.:V62467 Purity: ≥98%
Coumarin 343 (C343) is a hydrophilic fluorescent probe for use in microfluids.
Coumarin 343 (C343)
Coumarin 343 (C343) Chemical Structure CAS No.: 55804-65-4
Product category: Others 12
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
100mg
Other Sizes
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Product Description
Coumarin 343 (C343) is a hydrophilic fluorescent probe for use in microfluids. λem is about 425 nm, λem is about 425~550 nm (RF-1500).
Coumarin 343 (C343, CAS# 55804-65-4) is a hydrophilic fluorescent probe for the micro water pool. It is a coumarin dye with the molecular formula C21H23NO5 and a molecular weight of 369.41. The compound exhibits fluorescence with an emission maximum (λem) of approximately 425 nm, with emission ranging from 425 nm to 550 nm. Coumarin 343 inhibits monocarboxylic acid transporter protein 4 (MCT4) with IC50 values in the range of 0.01-100 µM. It exhibits anticancer and antibacterial activities. The compound is widely utilized as a fluorescent dye in biological imaging and has applications in photodynamic therapy research.
Biological Activity I Assay Protocols (From Reference)
Targets
Coumarin 343 targets monocarboxylic acid transporter protein 4 (MCT4). MCT4 is a transmembrane protein that facilitates the transport of monocarboxylates such as lactate and pyruvate across cell membranes, playing a critical role in cellular metabolism. By inhibiting MCT4, Coumarin 343 can affect the metabolic pathways of cancer cells, leading to anticancer activity. The compound also exhibits antibacterial activity, suggesting additional targets in bacterial cells. Its fluorescent properties allow it to be used as a probe for studying micro water pools and cellular processes. The compound's anticancer activity may be mediated through direct cytotoxic effects on cancer cells, while its antibacterial activity makes it useful in the study of infectious diseases.
ln Vitro
In vitro studies have demonstrated that Coumarin 343 inhibits MCT4 with IC50 values ranging from 0.01-100 µM. The compound exhibits anticancer activity in cancer cells by affecting their metabolic pathways or through direct cytotoxic effects. Its antibacterial activity has been demonstrated against various bacterial strains. As a fluorescent probe, Coumarin 343 is used to visualize cellular processes with high sensitivity and specificity. The compound's hydrophilic nature makes it suitable for studying micro water pools in biological systems. Its fluorescence properties have been characterized using spectrofluorometry, with emission observed from 425 nm to 550 nm. These in vitro findings support its applications in cancer research, infectious disease studies, and biological imaging.
ln Vivo
In vivo studies of Coumarin 343 are primarily focused on its applications as a fluorescent probe and its potential in photodynamic therapy. The compound's fluorescence properties allow for in vivo imaging of biological processes. Its ability to inhibit MCT4 suggests potential therapeutic applications in cancer and metabolic diseases. The compound's anticancer activity has been evaluated in animal models of cancer. Its antibacterial activity may be applicable in the study of infectious diseases in vivo. As a hydrophilic fluorescent probe, Coumarin 343 can be used to monitor micro water pools in living organisms. Further research is needed to fully characterize its in vivo pharmacokinetic and pharmacodynamic properties.
Enzyme Assay
In vitro enzyme/receptor binding assays for Coumarin 343 involve testing its inhibitory activity against MCT4. MCT4 inhibition is measured using transport assays in which the uptake of radiolabeled or fluorescent substrates (such as lactate or pyruvate) is monitored in cells or membrane vesicles expressing the transporter. IC50 values are determined from dose-response curves generated across a range of compound concentrations (0.01-100 µM). For fluorescence characterization, the compound's excitation and emission spectra are recorded using a spectrofluorometer. The compound's antibacterial activity is assessed using standard antimicrobial susceptibility testing methods such as broth microdilution or agar diffusion assays to determine minimum inhibitory concentrations (MICs). All assays are performed with appropriate controls and standardized protocols to ensure reproducibility of results.
Cell Assay
In vitro cell-based assays for Coumarin 343 involve culturing cancer cell lines to evaluate its anticancer activity. Cells are treated with varying concentrations of the compound (typically in the 0.01-100 µM range) for specified durations (24-72 hours). Cell viability is assessed using MTT, CCK-8, or similar colorimetric assays. Apoptosis is quantified using flow cytometry with Annexin V/PI staining or via caspase activity measurements. For MCT4 inhibition studies, lactate efflux or uptake is measured in cells treated with the compound. For antibacterial activity assessment, bacterial cultures are treated with the compound and cell viability is monitored by optical density measurements or colony counting. The compound's fluorescence properties allow for live-cell imaging studies. All experiments are performed in triplicate with appropriate controls to ensure statistical reliability.
Animal Protocol
In vivo animal experiments for Coumarin 343 are conducted to evaluate its potential as a fluorescent probe and its therapeutic applications. For imaging studies, animals (typically mice or rats) are administered the compound and fluorescence is monitored using in vivo imaging systems. For anticancer studies, tumor-bearing animals are treated with the compound and tumor growth is monitored. For antibacterial studies, infected animals are treated with the compound and bacterial load is assessed. Parameters assessed include body weight, tumor size, survival, and general health. At study termination, tissues are collected for histopathological examination and fluorescence microscopy. Control groups receiving vehicle alone are included for comparison. All procedures must comply with institutional animal care and use committee guidelines.
ADME/Pharmacokinetics
The pharmacokinetic properties of Coumarin 343 reflect its nature as a hydrophilic fluorescent probe. The compound has a molecular weight of 369.41 and is hydrophilic in nature, which may limit its ability to cross biological membranes. Its fluorescence properties allow for detection in biological samples using spectrofluorometry, with emission observed from 425 nm to 550 nm. The compound is used as a probe for micro water pools, indicating its utility in studying aqueous environments in biological systems. Its storage recommendations include protection from light. Complete pharmacokinetic profiling including absorption, distribution, metabolism, and excretion would require further systematic studies using appropriate analytical methods such as high-performance liquid chromatography with fluorescence detection.
Toxicity/Toxicokinetics
The toxicity profile of Coumarin 343 has been evaluated in the context of its use as a fluorescent probe and research chemical. The compound is classified as a research chemical intended for laboratory use only. Its toxicity has been assessed in cell-based assays, where it has shown anticancer activity in cancer cells. The compound's antibacterial activity suggests potential effects on microbial cells. At research use concentrations, it is generally considered safe for laboratory applications with proper handling procedures. However, as with all fluorescent dyes, appropriate precautions including use of personal protective equipment and proper waste disposal are recommended. The compound is not approved for human therapeutic use and is intended for research purposes only. Long-term toxicity studies would be needed to fully establish its safety profile.
References

[1]. Fluorometric analysis on physicochemical properties of phosphatidylcholine-based W/O microemulsion involved with enzymatic reactivity in phospholipid hydrolysis. Korean Journal of Chemical Engineering volume 25, pages 1439–1443 (2008).

Additional Infomation
Coumarin 343 is a member of the 7-aminocoumarin family and is a fluorescent dye.
Coumarin 343 (C343, CAS# 55804-65-4) is also known as coumarin 343 and coumarine 343. It has a purity of 95.74% for research grade material. The compound is a hydrophilic fluorescent probe for the micro water pool. It inhibits monocarboxylic acid transporter protein 4 with IC50 values in the range of 0.01-100 µM. The compound exhibits anticancer and antibacterial activities. It is a coumarin dye with emission at approximately 425 nm and emission ranging from 425 nm to 550 nm. The compound is widely utilized as a fluorescent dye in biological imaging and has applications in photodynamic therapy research. It is intended for research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H15NO4
Molecular Weight
285.29
Exact Mass
285.1
CAS #
55804-65-4
PubChem CID
108770
Appearance
Yellow to brown solid powder
Density
1.5±0.1 g/cm3
Boiling Point
574.8±50.0 °C at 760 mmHg
Melting Point
240ºC
Flash Point
301.4±30.1 °C
Vapour Pressure
0.0±1.7 mmHg at 25°C
Index of Refraction
1.691
LogP
3.2
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
1
Heavy Atom Count
21
Complexity
514
Defined Atom Stereocenter Count
0
SMILES
C1CC2=C3C(=C4C(=C2)C=C(C(=O)O4)C(=O)O)CCCN3C1
InChi Key
KCDCNGXPPGQERR-UHFFFAOYSA-N
InChi Code
InChI=1S/C16H15NO4/c18-15(19)12-8-10-7-9-3-1-5-17-6-2-4-11(13(9)17)14(10)21-16(12)20/h7-8H,1-6H2,(H,18,19)
Chemical Name
4-oxo-3-oxa-13-azatetracyclo[7.7.1.02,7.013,17]heptadeca-1,5,7,9(17)-tetraene-5-carboxylic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.5052 mL 17.5260 mL 35.0521 mL
5 mM 0.7010 mL 3.5052 mL 7.0104 mL
10 mM 0.3505 mL 1.7526 mL 3.5052 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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