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Nordeoxycholic acid (3α,12α-Dihydroxynorcholanic acid)

Cat No.:V61860 Purity: ≥98%
Nordeoxycholic acid is a 23-carbon bile acid.
Nordeoxycholic acid (3α,12α-Dihydroxynorcholanic acid)
Nordeoxycholic acid (3α,12α-Dihydroxynorcholanic acid) Chemical Structure CAS No.: 53608-86-9
Product category: Others 12
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes
Official Supplier of:
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Product Description
Nordeoxycholic acid is a 23-carbon bile acid. Nordeoxycholic acid is a metabolite of norcholic acid and a human steroid metabolite.
Nordeoxycholic acid (norDCA) is a naturally occurring 23-carbon bile acid metabolite derived from norcholic acid. It is structurally related to deoxycholic acid and represents a minor component within the broader bile acid pool in mammalian systems. Nordeoxycholic acid is a hydrophobic bile acid metabolite that serves as a model compound in LC-MS/MS measurement for the detection of related metabolites and as an internal standard for bile acid quantification.
Biological Activity I Assay Protocols (From Reference)
Targets
Nordeoxycholic acid does not have a specific pharmacological target but is studied as a bile acid metabolite. Bile acids, including nordeoxycholic acid, interact with nuclear receptors such as FXR (farnesoid X receptor) and TGR5, as well as with the enterohepatic circulation system. As a hydrophobic bile acid, nordeoxycholic acid facilitates lipid dispersion and micelle formation, aiding in studies of bile acid-lipid interactions, solubilization dynamics, and lipid digestion mechanisms. Its levels are altered in metabolic conditions including non-alcoholic fatty liver disease (NAFLD).
ln Vitro
In vitro, nordeoxycholic acid is used as a reference standard and model compound for bile acid analysis. The compound is a substrate for LC-MS/MS measurement and serves as an internal standard for the quantification of related bile acid metabolites in biological samples. Its amphipathic properties facilitate lipid dispersion and micelle formation in biochemical assays. Nordeoxycholic acid is used in studies of bile acid metabolism, enterohepatic circulation, and lipid digestion. Its effects on cell lines and metabolic pathways are less well-characterized than those of primary bile acids.
ln Vivo
In vivo, nordeoxycholic acid is a naturally occurring bile acid metabolite. Levels of nordeoxycholic acid are decreased in the liver of rats in a high-fat diet model of non-alcoholic fatty liver disease (NAFLD). The compound is also measured in serum, plasma, tissue, and bile as part of metabolomic studies of bile acid profiles. Its presence and concentration reflect bile acid metabolism and enterohepatic circulation. Nordeoxycholic acid is not administered as a therapeutic agent but is studied as a biomarker of metabolic status.
Enzyme Assay
Non-cell-based assays for nordeoxycholic acid primarily involve analytical chemistry methods including LC-MS/MS and GC-MS for quantification in biological samples. The compound serves as a reliable internal standard for bile acid quantification across serum, plasma, tissue, and bile matrices. Calibration curves are generated using nordeoxycholic acid standards. The compound's chemical properties (molecular formula, mass, retention time) are characterized using mass spectrometry and NMR. Its solubility and surface activity are measured in lipid interaction studies.
Cell Assay
As a bile acid metabolite and analytical standard, nordeoxycholic acid is not typically used in standard cell-based assays. However, in the context of bile acid research, the compound may be tested on hepatocytes or intestinal cells to study its effects on bile acid receptors, transporter function, or lipid metabolism. Cell viability, FXR/TGR5 activation, and gene expression changes are measured. These studies are limited, and the compound is primarily used as an analytical standard rather than a bioactive compound for cellular studies.
Animal Protocol
Nordeoxycholic acid is not used as a therapeutic agent in animal experiments. It is used as an internal standard and biomarker in metabolomic studies. In animal models of NAFLD or metabolic disease, nordeoxycholic acid levels are measured in liver, serum, or bile samples to assess changes in bile acid metabolism. The compound is quantified by LC-MS/MS as part of a panel of bile acid metabolites. Pharmacodynamic studies may evaluate the effects of interventions on bile acid profiles including nordeoxycholic acid levels.
ADME/Pharmacokinetics
Pharmacokinetic properties are not applicable to nordeoxycholic acid as it is not a therapeutic agent. The compound is a naturally occurring metabolite with defined chemical properties. Its stability in biological samples, extraction efficiency, and chromatographic behavior are characterized for analytical applications. As a bile acid, its metabolism involves enterohepatic circulation, hepatic conjugation (taurine or glycine), and intestinal reabsorption. However, specific PK parameters for nordeoxycholic acid are not available as it is not a drug.
Toxicity/Toxicokinetics
The toxicity of nordeoxycholic acid has not been comprehensively evaluated as it is not a therapeutic agent. As a naturally occurring bile acid metabolite, it is present at low concentrations in mammalian systems and is generally considered to be well-tolerated. However, at elevated concentrations, hydrophobic bile acids can be cytotoxic and may contribute to cholestatic liver injury. Nordeoxycholic acid is handled as a chemical reagent with standard laboratory safety precautions. The compound is for research use only and is not intended for human consumption.
References

[1]. Intestinal absorption and metabolism of norcholic acid in rats. J Pharmacobiodyn. 1985 Jul;8(7):557-63.

Additional Infomation
23-Demethyldeoxycholic acid is a choline compound.
Nordeoxycholic acid (CAS# 53608-86-9) is a 23-carbon bile acid with the molecular formula C₂₃H₃₈O₄. It is a metabolite of norcholic acid and a human steroid metabolite. Nordeoxycholic acid is structurally related to deoxycholic acid and is a hydrophobic bile acid metabolite. It serves as a model compound and internal standard in LC-MS/MS measurement for bile acid quantification across various biological matrices. Levels of nordeoxycholic acid are decreased in the liver in high-fat diet models of NAFLD. The compound is available for research use only and is not approved as a therapeutic agent.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C23H38O4
Molecular Weight
378.55
Exact Mass
378.277
CAS #
53608-86-9
PubChem CID
193905
Appearance
White to off-white solid powder
Density
1.142g/cm3
Boiling Point
536.7ºC at 760 mmHg
Melting Point
213.5-214.5ºC
Flash Point
292.4ºC
Index of Refraction
1.546
LogP
4.087
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
3
Heavy Atom Count
27
Complexity
591
Defined Atom Stereocenter Count
10
SMILES
C[C@H](CC(=O)O)[C@H]1CC[C@@H]2[C@@]1([C@H](C[C@H]3[C@H]2CC[C@H]4[C@@]3(CC[C@H](C4)O)C)O)C
InChi Key
PLRQOCVIINWCFA-AHFDLSHQSA-N
InChi Code
InChI=1S/C23H38O4/c1-13(10-21(26)27)17-6-7-18-16-5-4-14-11-15(24)8-9-22(14,2)19(16)12-20(25)23(17,18)3/h13-20,24-25H,4-12H2,1-3H3,(H,26,27)/t13-,14-,15-,16+,17-,18+,19+,20+,22+,23-/m1/s1
Chemical Name
(3R)-3-[(3R,5R,8R,9S,10S,12S,13R,14S,17R)-3,12-dihydroxy-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]butanoic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.6417 mL 13.2083 mL 26.4166 mL
5 mM 0.5283 mL 2.6417 mL 5.2833 mL
10 mM 0.2642 mL 1.3208 mL 2.6417 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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