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Cyclo-(Pro-Gly) (Pyrrolopiperazine-2,5-dione)

Cat No.:V60686 Purity: ≥98%
Cyclo-(Pro-Gly) (Pyrrolopiperazine-2,5-dione) is an alkaloid found in the green alga Ulva prolifera and has anti-algal activity against common harmful red tide microalgae.
Cyclo-(Pro-Gly) (Pyrrolopiperazine-2,5-dione)
Cyclo-(Pro-Gly) (Pyrrolopiperazine-2,5-dione) Chemical Structure CAS No.: 19179-12-5
Product category: Plants
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Cyclo-(Pro-Gly) (Pyrrolopiperazine-2,5-dione) is an alkaloid found in the green alga Ulva prolifera and has anti-algal activity against common harmful red tide microalgae. Cyclo-(Pro-Gly) (Pyrrolopiperazine-2,5-dione) has anti-amnestic and neuro-protection activities.
Cyclo-(Pro-Gly) (CAS# 19179-12-5), also known as Pyrrolopiperazine-2,5-dione, is a naturally occurring diketopiperazine (DKP) formed by the cyclization of proline and glycine. It is the simplest cyclic dipeptide and serves as a structural scaffold in peptide chemistry. This alkaloid has been isolated from green algae Ulva prolifera and exhibits diverse biological activities including antioxidant, antimicrobial, neuroactive, and antialgal properties. Cyclo-(Pro-Gly) also functions as a quorum-sensing molecule in microbial communication and has been studied for its anti-amnestic and neuroprotective effects.
Biological Activity I Assay Protocols (From Reference)
Targets
Cyclo-(Pro-Gly) targets multiple biological pathways. It inhibits chitinase B activity and exhibits weak antibacterial properties. The compound acts as a quorum-sensing molecule in microbial communication, influencing bacterial population behavior. In the central nervous system, Cyclo-(Pro-Gly) appears to facilitate memory and may be involved in a novel memory regulatory mechanism, as suggested by its presence in rat brain. The compound also demonstrates neuroprotective activities, potentially through modulation of neurotransmitter systems or reduction of oxidative stress.
ln Vitro
In vitro studies demonstrate that Cyclo-(Pro-Gly) exhibits weak antibacterial activity with a minimum inhibitory concentration (MIC) of 0.8 g/L against Bacillus subtilis. The compound shows antioxidant properties through free radical scavenging activity and inhibits chitinase B enzymatic activity. Cyclo-(Pro-Gly) possesses antialgal activity against common harmful red tide microalgae. Cytotoxicity has been observed at concentrations of 10 μmol/L. The compound's multifunctional nature makes it valuable in chemistry, microbiology, and neurological research.
ln Vivo
Cyclo-(Pro-Gly) (0.1 and 10 mg/kg, ip) appears to be a chemical that facilitates memory, and its presence in the rat brain indicates the possibility of a novel memory regulatory mechanism[3].
In vivo studies in rats demonstrate that Cyclo-(Pro-Gly) administered intraperitoneally at doses of 0.1 and 10 mg/kg appears to facilitate memory. The compound's presence in rat brain suggests the possibility of a novel endogenous memory regulatory mechanism. Cyclo-(Pro-Gly) exhibits anti-amnestic effects and neuroprotective actions in animal models. The compound has been identified as an endogenous cyclic dipeptide in rat brain, indicating potential physiological roles in cognition and memory processes. Further in vivo studies are warranted to explore its therapeutic potential in neurodegenerative and cognitive disorders.
Enzyme Assay
In vitro enzyme/receptor binding assays for Cyclo-(Pro-Gly) typically involve chitinase B inhibition assays using fluorogenic substrates. Enzyme activity is measured by the release of fluorescent product upon substrate cleavage, with inhibition calculated as percentage decrease in fluorescence compared to control. For antibacterial activity assessment, broth microdilution methods are used to determine minimum inhibitory concentration (MIC) against bacterial strains such as Bacillus subtilis. Antioxidant activity is evaluated using DPPH or ABTS radical scavenging assays, measuring the compound's ability to neutralize free radicals.
Cell Assay
In vitro cellular assays for Cyclo-(Pro-Gly) typically employ various cell lines to assess its biological activities. Cytotoxicity is evaluated using standard cell viability assays such as MTT or CCK-8 in relevant cell lines, with observed cytotoxicity at 10 μmol/L. For neuroprotective studies, neuronal cell cultures are treated with the compound prior to or concurrently with neurotoxic insults, and cell survival is assessed. Antimicrobial activity is evaluated in bacterial culture systems using disc diffusion or broth microdilution methods. The compound's antioxidant effects are assessed in cellular models of oxidative stress.
Animal Protocol
In vivo animal experiments for Cyclo-(Pro-Gly) typically utilize rodent models. The compound is administered intraperitoneally at doses of 0.1 and 10 mg/kg. Memory-enhancing effects are evaluated using behavioral paradigms such as passive avoidance tests or Morris water maze. The compound's presence in rat brain is confirmed through brain tissue analysis following administration. Neuroprotective effects are assessed in models of neurodegeneration or cognitive impairment. Dosing regimens and administration routes are optimized based on the specific experimental endpoints and animal species used.
ADME/Pharmacokinetics
Pharmacokinetic properties of Cyclo-(Pro-Gly) are characteristic of small cyclic dipeptides. With a molecular weight of 154.17 g/mol, the compound is expected to have favorable oral absorption and blood-brain barrier penetration. Its presence in rat brain following intraperitoneal administration confirms central nervous system bioavailability. The compound is soluble in DMSO and may dissolve in water, ethanol, or DMF. Storage conditions: powder at -20°C for 3 years or 4°C for 2 years; in solvent at -80°C for 6 months or -20°C for 1 month.
Toxicity/Toxicokinetics
The toxicological profile of Cyclo-(Pro-Gly) is generally favorable given its status as a naturally occurring compound found in green algae and present endogenously in rat brain. Cytotoxicity has been observed at concentrations of 10 μmol/L, suggesting a concentration-dependent safety margin. As a diketopiperazine commonly found in foods and biological systems, the compound is expected to have low acute toxicity. Standard toxicological evaluations including repeated-dose toxicity, genotoxicity, and reproductive toxicity studies would be required for therapeutic development, though such comprehensive data are not extensively published for this specific compound.
References

[1]. Isolation, Purification, and Identification of Antialgal Substances in Green Alga Ulva Prolifera for Antialgal Activity Against the Common Harmful Red Tide Microalgae. Environ Sci Pollut Res Int. 2016 Jan;23(2):1449-59.

[2]. Production Method for Cyclic Dipeptide Derived from Native Collagen. Food Science and Technology Research, 22 (4), 477-483, 2016.

[3]. Identification of a Novel Endogenous Memory Facilitating Cyclic Dipeptide Cyclo-Prolylglycine in Rat Brain. FEBS Lett. 1996 Aug 5;391(1-2):149-52.

Additional Infomation
Hexahydropyrrolo[1,2-a]pyrazine-1,4-dione is an organic nitrogen and organic oxygen compound whose function is related to α-amino acids. It has been reported that hexahydropyrrolo[1,2-a]pyrazine-1,4-dione exists in Streptomyces nigra, Streptomyces antioxidans, and Streptomyces xanthophaeus, and relevant data have been reported.
Cyclo-(Pro-Gly) (CAS# 19179-12-5, molecular formula C₇H₁₀N₂O₂, molecular weight 154.17) is an alkaloid isolated from green algae Ulva prolifera. It possesses antialgal, anti-amnestic, and neuroprotection activities. The compound is a product of both the mevalonate pathway and the MEP pathway of isoprenoid precursor biosynthesis. It is widely used in biochemical experiments and drug synthesis research. No clinical trials or regulatory approvals have been identified. Storage: powder at -20°C for 3 years or 4°C for 2 years.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C7H10N2O2
Molecular Weight
154.1665
Exact Mass
154.074
CAS #
19179-12-5
PubChem CID
193540
Appearance
White to off-white solid
Density
1.3±0.1 g/cm3
Boiling Point
447.9±34.0 °C at 760 mmHg
Flash Point
224.7±25.7 °C
Vapour Pressure
0.0±1.1 mmHg at 25°C
Index of Refraction
1.569
LogP
-2.74
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
2
Rotatable Bond Count
0
Heavy Atom Count
11
Complexity
215
Defined Atom Stereocenter Count
0
SMILES
O=C1C2([H])C([H])([H])C([H])([H])C([H])([H])N2C(C([H])([H])N1[H])=O
InChi Key
OWOHLURDBZHNGG-UHFFFAOYSA-N
InChi Code
InChI=1S/C7H10N2O2/c10-6-4-8-7(11)5-2-1-3-9(5)6/h5H,1-4H2,(H,8,11)
Chemical Name
2,3,6,7,8,8a-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 6.4863 mL 32.4317 mL 64.8635 mL
5 mM 1.2973 mL 6.4863 mL 12.9727 mL
10 mM 0.6486 mL 3.2432 mL 6.4863 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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