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PROTAC FGFR3 Degrader-1

Cat No.:V143330 Purity: ≥98%
PROTAC FGFR3 Degrader-1 is a PROTAC degrader of fibroblast growth factor receptor 3 (FGFR3). It promotes FGFR3 degradation through the ubiquitin-proteasome pathway and inhibits the downstream FGFR3/PI3K/AKT signaling pathway.
PROTAC FGFR3 Degrader-1
PROTAC FGFR3 Degrader-1 Chemical Structure Product category: FGFR
This product is for research use only, not for human use. We do not sell to patients.
Size Price
500mg
1g
Other Sizes
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Product Description
PROTAC FGFR3 Degrader-1 is a PROTAC degrader of fibroblast growth factor receptor 3 (FGFR3). It promotes FGFR3 degradation via the ubiquitin-proteasome pathway and inhibits the downstream FGFR3/PI3K/AKT signaling pathway. PROTAC FGFR3 Degrader-1 can be used in research on hepatocellular carcinoma. (Pink: FGFR3 ligand; Blue: Cerebrolysin ligand; Black: Linker)
Biological Activity I Assay Protocols (From Reference)
ln Vitro
PROTAC FGFR3 Degrader-1 (48 h) effectively inhibited the proliferation of Huh-7, HepG2 and MHCC97-H liver cancer cells, with IC50 values of 0.56 μM, 1.44 μM and 1.87 μM, respectively [1]. PROTAC FGFR3 Degrader-1 (0.125-1 μM; 24 h) promoted dose-dependent degradation of FGFR3 protein in Huh-7 cells via the proteasome pathway, and this degradation process could be inhibited by combined treatment with B10 or pomalidomide [1]. PROTAC FGFR3 Degrader-1 (0.25-1 μM; 6-24 h) downregulated the expression of FGFR3 in Huh-7 cells in a time- and dose-dependent manner and inhibited the activity of the FGFR3/PI3K/AKT signaling pathway [1]. PROTAC FGFR3 degrader-1 (40 μM) stably binds to FGFR3 in Huh-7 cells, as demonstrated by its ability to protect FGFR3 from thermal denaturation in cell thermal denaturation assays [1]. PROTAC FGFR3 degrader-1 (10-40 μM) stably binds to FGFR3 in Huh-7 cell lysates, as demonstrated by its dose-dependent protective effect on FGFR3 in drug affinity-response target stability assays [1]. Molecular docking predictions showed that the binding energy of PROTAC FGFR3 degrader-1 to FGFR3 was -7.5 kcal/mol [1].
Cell Assay
Western Blot Analysis [1]
Cell Types: Huh-7
Tested Concentrations: 0.125–1 μM (degradation efficiency assessment); 1 μM (treatment alone for 24 hours); 10 μM MG132 (combined treatment); 1 μM B10 (combined treatment); 10 μM pomalidomide (combined treatment)
Incubation Duration: 24 hours (1 μM treatment; combined treatment)
Experimental Results: Promoted dose-dependent degradation of FGFR3 protein, with significant degradation observed at 0.5 μM and 1 μM. Treatment with MG132 in combination rescued its induced FGFR3 degradation, treatment with its precursor B10 in combination inhibited its induced FGFR3 degradation, and treatment with the CRBN E3 ligase ligand pomalidomide in combination inhibited its induced FGFR3 degradation.
Western Blot Analysis [1]
Cell Types: Huh-7
Tested Concentrations: 0.25-1 μM (dose-dependent assessment); 1 μM (time-dependent assessment)
Incubation Duration: 6 h, 12 h, 24 h (1 μM treatment)
Experimental Results: FGFR3 expression was downregulated, and PI3K/AKT pathway activity was inhibited in a time- and dose-dependent manner. Activation of FGFR3 significantly reversed its inhibitory effect on PI3K/AKT pathway activity.
References

[1]. A novel matrine derivative B10 exerts its anti-liver cancer activity in vitro and in vivo via targeting FGFR3/PI3K/AKT signaling pathway. Mol Divers. Published online January 14, 2026.

These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C46H53N9O5S
Molecular Weight
844.04
Appearance
Typically exists as solids at room temperature
SMILES
O=C(C1=CC2=C(N3C[C@@]4(CCCN5CCC[C@@]([C@@]54[H])([C@]3(CC2)[H])[H])[H])S1)NC6=C(C7=CN(CCCCNC8=CC=CC(C(N9C%10CCC(NC%10=O)=O)=O)=C8C9=O)N=N7)C=C(C(C)C)C=C6
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.1848 mL 5.9239 mL 11.8478 mL
5 mM 0.2370 mL 1.1848 mL 2.3696 mL
10 mM 0.1185 mL 0.5924 mL 1.1848 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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