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Descladinose 6-N-desmethyl azithromycin

Demethylazithromycin 6-N-dechloridemycin is an impurity of teradycin.
Descladinose 6-N-desmethyl azithromycin
Descladinose 6-N-desmethyl azithromycin Chemical Structure CAS No.: 111247-94-0
Product category: Drug Intermediate
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Descladinose 6-N-Desmethyl Azithromycin is a Teramycin impurity.
Descladinose 6-N-desmethyl azithromycin (CAS 111247-94-0) is an impurity of the macrolide antibiotic Azithromycin. It is a structural analog lacking the cladinose sugar (the "descladinose" feature) and having a demethylation at the 6-N position. Its molecular formula is C29H56N2O9, with a molecular weight of 576.76 g/mol. In research, it is utilized as an analytical reference standard for the quality control of azithromycin. It is also known as Teramycin impurity or CP 60300. It is a metabolite of Azithromycin, which is an azalide macrolide antibiotic. This compound is used for analytical method development, method validation, and quality-controlled (QC) applications.
Biological Activity I Assay Protocols (From Reference)
Targets
Not applicable. Descladinose 6-N-desmethyl azithromycin is a degradation product and impurity of azithromycin. It does not possess significant antibacterial activity compared to the parent drug. Azithromycin targets the bacterial 50S ribosomal subunit, inhibiting protein synthesis. This impurity has a modified sugar structure, which significantly reduces its binding affinity to the ribosome. It is not used as an antibiotic. Its role is to serve as a marker for the stability and purity of azithromycin formulations.
ln Vitro
In vitro, this compound is not used for biological activity. It is an analytical standard. In an HPLC method for azithromycin, a system suitability solution containing azithromycin (2 mg/mL) and the impurity at 0.5-1.0 ug/mL is prepared. A C18 column (4.6 × 150 mm) is used with a mobile phase of acetonitrile:0.1 M ammonium acetate pH 6.5 (60:40). Detection is by evaporative light scattering (ELSD) or UV at 210 nm. The impurity is used to verify the resolution of the method. It has no direct antimicrobial activity in standard MIC assays against S. aureus or S. pneumoniae.
ln Vivo
In vivo, this compound is not administered as a drug. It is a metabolite and impurity. When azithromycin is administered to animals, this impurity can be detected in plasma. It is monitored in pharmacokinetic studies to characterize the metabolic profile. It is not used for efficacy. In stability studies, azithromycin samples are stressed (heat, humidity, light), and this impurity is analyzed to ensure it remains below acceptable limits.
Enzyme Assay
General protocol for in vitro analytical use: For HPLC analysis of Azithromycin impurities, prepare a stock solution of the impurity (1 mg/mL) in acetonitrile. Prepare a standard mixture containing Azithromycin (2 mg/mL) and the impurity (2 ug/mL). Use a C18 column (4.6 × 150 mm, 5 um) at 40degC. Mobile phase: acetonitrile: 0.1 M ammonium acetate (pH 6.5) (60:40). Flow rate: 1.0 mL/min. Detection: UV at 210 nm or ELSD. The relative retention time (RRT) of the impurity is approximately 0.7 relative to azithromycin. Validate linearity (0.1-10 ug/mL). The reference standard is stored at -20degC. For LC-MS, use positive mode with m/z 577 [M+H]+.
Cell Assay
General protocol for in vitro cell-based experiments: For a forced degradation study, dissolve azithromycin (10 mg) in 1 mL of 0.1 M HCl. Incubate at 60degC for 4 h. Neutralize. Analyze by HPLC. The impurity peak will appear. This demonstrates the degradation profile. No cell culture is required.
Animal Protocol
General protocol for in vivo animal experiments: For a pharmacokinetic study, administer azithromycin (10 mg/kg, PO) to rats. Collect blood at 0, 1, 2, 4, 8, 12, 24, 48, 72 h. Extract plasma with acetonitrile. Analyze by LC-MS/MS. The level of this impurity in plasma is usually <5% of the parent drug. This is a PK study, not an efficacy model.
ADME/Pharmacokinetics
General pharmacokinetic properties: This impurity (MW 576.76) is not a drug. It is a macrolide derivative. It is soluble in organic solvents. For storage, the reference standard should be stored at -20degC, protected from light. The product is for research use only. The compound is a metabolite of Azithromycin. It is an impurity and is used as a reference standard for quality control. This product is strictly intended for laboratory, research, analytical, and scientific use only. It is not meant for human consumption, therapeutic use, or any form of clinical application.
Additional Infomation
Descladinose 6-N-desmethyl azithromycin is also known as Teramycin impurity and CP 60300. It is a key reference standard for the European Pharmacopoeia (EP) and USP for azithromycin. It is a white to off-white solid. The product is for analytical and research purposes only. For research use only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C29H56N2O9
Molecular Weight
576.76
Exact Mass
576.399
CAS #
111247-94-0
PubChem CID
59037908
Appearance
Typically exists as solids at room temperature
Hydrogen Bond Donor Count
6
Rotatable Bond Count
4
Heavy Atom Count
40
Complexity
818
Defined Atom Stereocenter Count
14
SMILES
CC[C@@H]1[C@@]([C@@H]([C@H](NC[C@@H](C[C@@]([C@@H]([C@H]([C@@H]([C@H](C(=O)O1)C)O)C)O[C@H]2[C@@H]([C@H](C[C@H](O2)C)N(C)C)O)(C)O)C)C)O)(C)O
InChi Key
LOMZTTMTKSVHAG-NHUOXGILSA-N
InChi Code
InChI=1S/C29H56N2O9/c1-11-21-29(8,37)24(34)19(6)30-14-15(2)13-28(7,36)25(17(4)22(32)18(5)26(35)39-21)40-27-23(33)20(31(9)10)12-16(3)38-27/h15-25,27,30,32-34,36-37H,11-14H2,1-10H3/t15-,16-,17+,18-,19-,20+,21-,22+,23-,24-,25-,27+,28-,29-/m1/s1
Chemical Name
(2R,3S,4R,5R,8R,10R,11R,12S,13S,14R)-11-[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy-2-ethyl-3,4,10,13-tetrahydroxy-3,5,8,10,12,14-hexamethyl-1-oxa-6-azacyclopentadecan-15-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.7338 mL 8.6691 mL 17.3382 mL
5 mM 0.3468 mL 1.7338 mL 3.4676 mL
10 mM 0.1734 mL 0.8669 mL 1.7338 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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