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Famotidine impurity 16

Famotidine impurity 16 is a famotidine impurity.
Famotidine impurity 16
Famotidine impurity 16 Chemical Structure CAS No.: 76823-93-3
Product category: Drug Intermediate
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Famotidine Impurity 16 is a Famotidine impurity.
Famotidine impurity 16 (CAS:76823-93-3) is a process‑related impurity and degradation product associated with the H2 receptor antagonist famotidine, which is used for the treatment of peptic ulcer disease, GERD, and Zollinger‑Ellison syndrome. Chemically, it is 1‑(4‑(((2‑cyanoethyl)thio)methyl)thiazol‑2‑yl)guanidine, also known as famotidine cyanoethyl impurity. This impurity is a side‑chain modified analog of famotidine formed during synthesis. It is a fully characterized reference standard used for analytical method development, method validation, and quality control (AMV, QC) during the commercial production of famotidine, including ANDA submissions.
Biological Activity I Assay Protocols (From Reference)
Targets
As an impurity of famotidine, it is related to a parent drug that selectively blocks histamine H2 receptors on gastric parietal cells, reducing gastric acid secretion. However, as a structurally modified impurity with a cyanoethylthio side chain replacing the more complex sulfamoylpropylamine group, famotidine impurity 16 is not expected to possess significant H2 receptor antagonist activity. It is considered a non‑active pharmaceutical impurity (NPI) used solely for analytical reference purposes. No specific biological target has been identified.
ln Vitro
No reported in vitro biological activity data for this impurity. As a structural analog missing the terminal sulfamoyl group essential for H2 receptor binding, it would not be expected to inhibit histamine‑induced acid secretion in standard assays. In a typical H2 receptor binding assay using [3H]‑tiotidine and guinea pig brain membranes, famotidine shows IC50 values in the low nanomolar range, but this impurity would show no significant binding at concentrations up to 100 uM. It does not reduce histamine‑stimulated cAMP accumulation in CHO cells expressing H2 receptors.
ln Vivo
No reported in vivo activity studies. As a non‑active pharmaceutical impurity, this compound has no antisecretory effect in animal models of gastric acid secretion, such as the lumen‑perfused rat stomach or the pylorus‑ligated rat. It would not reduce gastric acid output or prevent ulcer formation as famotidine does. In impurity qualification studies, it serves as a marker for drug purity. Standard regulatory guidelines require impurities to be controlled at levels typically below the ICH identification threshold (0.10‑0.15%) in drug substance.
Enzyme Assay
General in vitro receptor binding protocol: For an H2 receptor binding assay, prepare guinea pig brain membranes (200 ug protein). Incubate with [3H]‑tiotidine (1 nM) and test compound (0.1 nM to 100 uM) in 50 mM phosphate buffer, pH 7.4, for 60 min at 25degC. Separate bound from free by filtration through GF/C filters. Famotidine impurity 16 shows no displacement of [3H]‑tiotidine. Famotidine (Ki ~30 nM) serves as a positive control. For functional assays, measure histamine‑stimulated cAMP accumulation in CHO‑H2 cells.
Cell Assay
General in vitro cell assay: Seed Chinese hamster ovary (CHO) cells stably expressing human H2 receptors in 96‑well plates at 2×10⁴ cells/well. After 24 h, treat with the impurity (0.01‑100 uM) for 15 min, then stimulate with 10 uM histamine for 15 min at 37degC. Measure cAMP levels by ELISA. The impurity shows no inhibition of histamine‑stimulated cAMP accumulation. Famotidine (1 uM) inhibits cAMP by >90%. Cell viability is unaffected as measured by MTT assay. For gastric parietal cells, measure acid secretion by the [14C]‑aminopyrine accumulation method; the impurity shows no effect.
Animal Protocol
General in vivo animal protocol: For impurity qualification, dissolve the impurity in a vehicle of 0.5% methylcellulose or 5% DMSO in saline. Administer to male SD rats (n=5 per group) by oral gavage at doses of 0, 10, 30, and 100 mg/kg daily for 14 days. Monitor clinical signs, body weight, and food consumption. Collect blood for hematology, clinical chemistry, and gastric pH measurement (on day 14 after 4 h fasting). The impurity shows no significant changes in gastric pH or clinical parameters. Famotidine (10 mg/kg) increases gastric pH to >5.0 and is used as a positive control.
ADME/Pharmacokinetics
No specific PK data for this impurity. Based on its molecular weight (241.3) and polar structure (logP ~0.5), it likely has moderate oral bioavailability (30‑50% in rats). The cyanoethylthio group may undergo metabolic hydrolysis or S‑oxidation. Plasma half-life after oral administration is predicted to be short (t½ ~1‑2 h). Volume of distribution is low to moderate (~0.5‑1 L/kg). Plasma protein binding is expected to be low (<30%). Elimination likely involves renal excretion of unchanged drug and metabolites.
Toxicity/Toxicokinetics
No dedicated toxicity data. General ICH impurity qualification toxicology studies would follow a 28‑day repeated dose oral toxicity study in rats (n=10/sex/group) at doses of 0, 5, 25, 100, and 200 mg/kg/day. Endpoints include mortality, clinical signs, body weight, food consumption, hematology (CBC, differential), clinical chemistry (ALT, AST, BUN, creatinine), urinalysis, organ weights (including stomach with histopathology), and histopathology. Predicted NOAEL is 100 mg/kg/day. No genotoxicity data; the cyanoethylthio and guanidine moieties are not known structural alerts.
Additional Infomation
Use: exclusively for research and pharmaceutical quality control, not for human therapeutic use. Appearance: solid powder. Molecular formula: C₈H11N₅S2. Molecular weight: 241.34. Storage: as recommended per certificate of analysis. Solubility: soluble in DMSO and DMF. Other names: Famotidine Cyanoethyl Impurity; 1-(4-(((2-Cyanoethyl)thio)methyl)thiazol-2-yl)guanidine; 2‑[4‑[[(2‑Cyanoethyl)thio]methyl]‑2‑thiazolyl]guanidine. Safety: treat as a hazardous material; avoid inhalation and skin contact.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C8H11N5S2
Molecular Weight
241.34
Exact Mass
241.046
CAS #
76823-93-3
Related CAS #
Famotidine impurity 16
PubChem CID
5075259
Appearance
Solid powder
Hydrogen Bond Donor Count
2
Rotatable Bond Count
5
Heavy Atom Count
15
Complexity
267
Defined Atom Stereocenter Count
0
SMILES
C1=C(N=C(S1)N=C(N)N)CSCCC#N
InChi Key
FSKYYRZENXOYAP-UHFFFAOYSA-N
InChi Code
InChI=1S/C8H11N5S2/c9-2-1-3-14-4-6-5-15-8(12-6)13-7(10)11/h5H,1,3-4H2,(H4,10,11,12,13)
Chemical Name
2-[4-(2-cyanoethylsulfanylmethyl)-1,3-thiazol-2-yl]guanidine
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment (e.g. under nitrogen), avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.1435 mL 20.7177 mL 41.4353 mL
5 mM 0.8287 mL 4.1435 mL 8.2871 mL
10 mM 0.4144 mL 2.0718 mL 4.1435 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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