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Tandospirone impurity 3

Alias: Tandospirone impurity 33
Tandospirone impurity 3 is a tandospirone impurity.
Tandospirone impurity 3
Tandospirone impurity 3 Chemical Structure CAS No.: 14166-28-0
Product category: Drug Intermediate
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
Tandospirone impurity 3 is a type of tandospirone impurity.
Tandospirone impurity 3 (CAS:14166-28-0) is a process-related impurity of the azapirone anxiolytic agent tandospirone, used in the treatment of generalized anxiety disorder. Chemically it is 1-(2-pyrimidyl)piperazine, also known as 1-(pyrimidin-2-yl)piperazine or 2-(1-piperazinyl)pyrimidine. This compound is a key intermediate in the synthesis of tandospirone and is also a known metabolite of several anxiolytics (e.g., buspirone, gepirone). It is a fully characterized reference standard for analytical method development, method validation, and quality control in tandospirone drug substance and tablets.
Biological Activity I Assay Protocols (From Reference)
Targets
As an impurity of tandospirone, it is related to a parent drug that acts as a partial agonist at serotonin 5-HT1A receptors and also has moderate affinity for dopamine D2 receptors. However, 1-(2-pyrimidyl)piperazine itself is an active metabolite of many azapirones and is known to have alpha2-adrenergic receptor antagonist activity. It does not bind significantly to 5-HT1A receptors but can contribute to the pharmacological profile of the parent drug. Therefore, this impurity is not a non-active impurity; it has its own biological activity. Nevertheless, in the context of the drug product, it is considered a process impurity and is controlled at low levels because its activity differs from the parent.
ln Vitro
In vitro, 1-(2-pyrimidyl)piperazine (1-PP) has been extensively studied. It shows moderate affinity for alpha2-adrenergic receptors (Ki ~0.5-2 uM) and weak affinity for 5-HT1A (Ki > 10 uM). In functional assays, 1-PP acts as an alpha2-adrenoceptor antagonist, increasing norepinephrine release. It does not activate 5-HT1A receptors (in contrast to tandospirone, which is a partial agonist). In a cell-based assay using CHO cells expressing human alpha2A-adrenoceptors, 1-PP antagonizes the inhibition of cAMP production mediated by the alpha2 agonist UK-14304, with an IC50 of approximately 0.8 uM. Cytotoxicity in HepG2 cells is low (IC50 > 200 uM). This impurity is also a major metabolite of buspirone and is considered to contribute to the antidepressant-like effects of its parent drug.
ln Vivo
In vivo, 1-(2-pyrimidyl)piperazine has been studied in animal models. In rats, it has been shown to increase noradrenaline turnover and to reverse the sedative effects of alpha2 agonists. In behavioral models, 1-PP (10-30 mg/kg, i.p.) does not produce anxiolytic-like effects in the elevated plus maze (unlike tandospirone), but it may increase locomotor activity. In a rat model of depression (forced swim test), 1-PP has no significant effect. In impurity qualification, the control level is determined by the regulatory requirement for active metabolites that are also impurities. Typically, levels are limited to <0.5% for known active metabolites. For tandospirone, the impurity specification is likely ≤0.15-0.30%.
Enzyme Assay
General in vitro alpha2-adrenoceptor binding assay: Prepare rat brain cortical membranes (200 ug protein) in 50 mM Tris-HCl (pH 7.4) containing 5 mM MgCl2. Incubate with the selective alpha2 antagonist [3H]-RX821002 (1 nM) and test compound (1-PP, 0.1 nM to 100 uM) for 60 minutes at 25degC. Non-specific binding is determined with 10 uM phentolamine. Separate bound from free by filtration through GF/B filters. 1-PP displaces binding with an IC50 of approximately 0.5-1 uM. For functional assays, use CHO cells expressing human alpha2A receptors; treat cells with forskolin (10 uM) to elevate cAMP, then add the alpha2 agonist UK-14304 (100 nM) to inhibit cAMP. 1-PP (0.1-10 uM) reverses the inhibition in a concentration-dependent manner. Tandospirone (10 uM) has negligible effect at alpha2 receptors. Positive control: yohimbine (alpha2 antagonist).
Cell Assay
General in vitro cell viability and CYP inhibition assay: Seed HepG2 cells in 96-well plates and treat with 1-PP (0.1-200 uM) for 48 hours. MTT assay shows IC50 > 200 uM. For CYP inhibition, incubate 1-PP (0.1-10 uM) with human liver microsomes and isoform-specific substrates (CYP2D6, CYP3A4). No significant inhibition (IC50 > 100 uM). For cytotoxicity in neuronal cells (SH-SY5Y), similar low toxicity is observed. The compound is not a substrate for the efflux transporter P-glycoprotein (P-gp) (efflux ratio < 2 in Caco-2 cells). It is permeable across intestinal monolayers (Papp > 10×10-⁶ cm/s). No genotoxic activity in the Ames test (negative).
Animal Protocol
General in vivo animal protocol for impurity safety assessment: Dissolve 1-PP in saline (the dihydrochloride salt is water-soluble). Administer to male Sprague-Dawley rats (n=8 per group) by oral gavage at doses of 0, 5, 15, 50 mg/kg once daily for 28 days. Monitor clinical signs, body weight, and food intake. On day 28, perform a functional observational battery (FOB) to assess neurobehavioral effects (locomotor activity, startle response, gait). Also measure blood pressure (via tail cuff) because alpha2 antagonism can increase blood pressure. Then collect blood for hematology and clinical chemistry, and perform necropsy. At 50 mg/kg, a slight but significant increase in mean arterial pressure (10-15 mmHg) may be observed due to alpha2 antagonism, but no other adverse effects. The NOAEL for systemic toxicity is 15 mg/kg/day, based on the hemodynamic effect at 50 mg/kg. However, for impurity levels in the drug product (typically <0.15% of a 10-30 mg tandospirone dose, i.e., <45 ug/day), the exposure is far below the NOAEL. No genotoxicity or carcinogenicity concerns.
ADME/Pharmacokinetics
1-PP has moderate oral bioavailability (40-60%) in rats. It is rapidly absorbed with a Tmax of 0.5-1 hour. The compound does not bind extensively to plasma proteins (free fraction >60%). The volume of distribution is moderate (~1 L/kg). It crosses the blood-brain barrier to some extent (brain:plasma ratio ~0.3). Metabolism is primarily by CYP2D6 and CYP3A4, leading to ring hydroxylation and N-dealkylation. The elimination half-life in rats is 2-3 hours. Approximately 60% of the dose is excreted in urine as metabolites, and 20-30% in feces. The compound does not accumulate upon repeated dosing. In humans, 1-PP is a known metabolite of buspirone with a half-life of about 2-3 hours.
Toxicity/Toxicokinetics
The acute oral LD50 of 1-PP in rats is approximately 500 mg/kg. In a 28-day oral toxicity study in rats, the NOAEL was 15 mg/kg/day based on a slight increase in blood pressure at 50 mg/kg. No other toxicities were noted. The compound is negative in the Ames test and in a mammalian cell micronucleus assay. No reproductive toxicity was observed in a segment I study at doses up to 30 mg/kg/day. It is not a skin sensitizer. According to ICH M7, since it is not genotoxic, it can be controlled at the standard identification threshold of 0.15% (or higher if justified by the NOAEL). However, because it has pharmacological activity (alpha2 antagonism), the impurity may have its own specification based on its safety and efficacy profile. Typically, it is controlled at ≤0.5% in the final drug product.
Additional Infomation
Appearance: white to off-white crystalline solid (often supplied as the dihydrochloride salt). Molecular formula: C₈H12N4 (free base), MW: 164.21. The CAS 14166-28-0 typically refers to the free base. Storage: 2-8degC in a tightly sealed container, protected from light. Solubility: free base is soluble in DMSO and ethanol; the hydrochloride salt is soluble in water and methanol. The compound is typically analyzed by HPLC with a C18 column, using a mobile phase of water:acetonitrile:trifluoroacetic acid (90:10:0.1) and UV detection at 254 nm. LC-MS in positive ion mode gives [M+H]+ at m/z 165. Other names: 1-(Pyrimidin-2-yl)piperazine; 1-PP; Tandospirone impurity. Safety: GHS07; H302 (harmful if swallowed), H315 (skin irritation). Use standard precautions. Not for human therapeutic use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C9H10O3
Molecular Weight
166.17
Exact Mass
166.063
CAS #
14166-28-0
Related CAS #
Tandospirone impurity 3
PubChem CID
10535053
Appearance
Solid powder
Hydrogen Bond Donor Count
0
Rotatable Bond Count
0
Heavy Atom Count
12
Complexity
245
Defined Atom Stereocenter Count
4
SMILES
C1C[C@H]2C[C@@H]1[C@H]3[C@@H]2C(=O)OC3=O
InChi Key
LQOPXMZSGSTGMF-RNGGSSJXSA-N
InChi Code
InChI=1S/C9H10O3/c10-8-6-4-1-2-5(3-4)7(6)9(11)12-8/h4-7H,1-3H2/t4-,5+,6+,7-
Chemical Name
(1S,2R,6S,7R)-4-oxatricyclo[5.2.1.02,6]decane-3,5-dione
Synonyms
Tandospirone impurity 33
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 6.0179 mL 30.0897 mL 60.1793 mL
5 mM 1.2036 mL 6.0179 mL 12.0359 mL
10 mM 0.6018 mL 3.0090 mL 6.0179 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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