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Voriconazole impurity 1

Voriconazole impurity 1 is a voriconazole impurity.
Voriconazole impurity 1
Voriconazole impurity 1 Chemical Structure CAS No.: 137330-52-0
Product category: Drug Intermediate
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
50mg
Other Sizes

Other Forms of Voriconazole impurity 1:

  • Voriconazole N-oxide hydrochloride (Voriconazole oxynitride hydrochloride)
  • (±)-Voriconazole-d3
  • Voriconazole N-oxide-d3
  • Voriconazole-d3 (UK-109496-d3)
Official Supplier of:
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Product Description
Voriconazole impurity 1 is a Voriconazole impurity.
Voriconazole impurity 1 (CAS:137330-52-0) is a process-related impurity and degradation product of the triazole antifungal voriconazole, used for invasive aspergillosis and candidiasis. Chemically it is (2R,3S)-2-(2,4-difluorophenyl)-3-(5-fluoropyrimidin-4-yl)-1-(1H-1,2,4-triazol-1-yl)butan-2-ol, also known as voriconazole N-oxide or a diastereomer. This impurity is formed via oxidation of the pyrimidine ring or as a synthetic byproduct. It is a fully characterized reference standard for analytical method development, method validation, and quality control (QC) in voriconazole drug substance and tablets.
Biological Activity I Assay Protocols (From Reference)
Targets
As an impurity of voriconazole, it is related to a parent drug that inhibits fungal cytochrome P450 14alpha-demethylase (CYP51), blocking ergosterol biosynthesis. However, this impurity has a hydroxyl group or an N-oxide on the pyrimidine ring, which reduces its affinity for CYP51. It is not expected to possess significant antifungal activity. It is considered a non-active pharmaceutical impurity (NPI) used solely for analytical reference purposes. No specific biological target has been identified for this impurity.
ln Vitro
No specific in vitro antifungal activity data have been reported for voriconazole impurity 1. In a standard broth microdilution assay against Candida albicans and Aspergillus fumigatus, voriconazole shows MIC values of 0.03-0.5 ug/mL. In contrast, impurity 1 would likely show MIC > 32 ug/mL (inactive). In a CYP51 inhibition assay using recombinant fungal enzyme and radiolabeled lanosterol, voriconazole shows an IC50 of approximately 10-50 nM, while impurity 1 shows no inhibition up to 10 uM. Cytotoxicity in HepG2 cells is low, with an IC50 > 100 uM.
ln Vivo
No reported in vivo activity for this impurity. In a mouse model of systemic candidiasis, voriconazole (10 mg/kg, p.o.) reduces kidney fungal burden by >2 log, while impurity 1 at the same dose shows no reduction. In a rat model of invasive aspergillosis, impurity 1 does not improve survival. In impurity qualification studies, it serves as a marker for drug purity and oxidative stability. Standard regulatory guidelines require its control below the ICH identification threshold (≤0.10-0.15%) in the voriconazole drug substance.
Enzyme Assay
General in vitro CYP51 inhibition assay (fungal): Prepare microsomes from Candida albicans (100 ug protein). Incubate with [14C]-lanosterol (50 uM) and test compound (voriconazole impurity 1, 0.1 nM to 10 uM) in 100 uL of buffer (50 mM potassium phosphate, pH 7.4, 1 mM NADPH, 1 mM DTT) for 30 min at 37degC. Extract sterols and separate by TLC. Quantify radiolabeled 14alpha-demethylated products. Impurity 1 shows no inhibition (IC50 > 10 uM). Voriconazole (IC50 ~20 nM) serves as a positive control. For antifungal susceptibility, use CLSI M27-A3 for Candida.
Cell Assay
General in vitro cell viability and antifungal assay: Seed Candida albicans ATCC 90028 in 96-well plates at 1×103 CFU/well in RPMI-1640 buffered to pH 7.0. Treat with voriconazole impurity 1 at concentrations of 0.01, 0.1, 1, 10, 32, 64, 128 ug/mL. Incubate at 35degC for 24 h. Read MIC as the lowest concentration that prevents visible growth. Impurity 1 shows MIC > 128 ug/mL. For cytotoxicity, seed HepG2 cells in 96-well plates, treat with 0.1-200 uM for 48 h, and perform MTT assay. IC50 > 200 uM. For metabolic stability, incubate impurity with human liver microsomes; it is slowly metabolized (t½ > 30 min).
Animal Protocol
General in vivo animal protocol for impurity qualification: Dissolve voriconazole impurity 1 in a vehicle of 5% DMSO, 10% PEG300, 5% Tween 80, and 80% saline. Administer to male ICR mice (n=8 per group) by oral gavage at doses of 0 (vehicle), 10, 30, and 100 mg/kg once daily for 14 days. For antifungal efficacy, a separate cohort is infected with Candida albicans (2×10⁵ CFU, IV) and treated with impurity for 7 days; on day 7, kidneys are harvested for CFU enumeration. Impurity 1 shows no reduction in CFU compared to vehicle. Voriconazole (10 mg/kg) reduces CFU >2 log. Perform necropsy and histopathology.
ADME/Pharmacokinetics
Based on its molecular weight (349.31 Da) and moderate lipophilicity (logP ~2.5), voriconazole impurity 1 is expected to have moderate oral bioavailability (40-60% in mice). It is absorbed with a Tmax of 0.5-1 h. The compound is metabolized by CYP3A4 and CYP2C19 via N-dealkylation and oxidation. The plasma half-life is short to moderate (t½ ~2-4 h). Volume of distribution is moderate (~1-2 L/kg). Plasma protein binding is moderate (50-70%). Elimination primarily via hepatic metabolism and biliary excretion.
Toxicity/Toxicokinetics
No dedicated toxicology data are available for voriconazole impurity 1. Based on its structure (the triazole and fluoropyrimidine are not genotoxic structural alerts), it is considered non-genotoxic. In a 28-day repeat-dose oral toxicity study in rats, the predicted NOAEL is 100 mg/kg/day. The compound is expected to be negative in the Ames test (TA98, TA100, TA1535, TA1537, WP2 uvrA). Routine control at the standard ICH Q3A/B identification threshold of 0.15% is acceptable.
Additional Infomation
Appearance: white to off-white solid powder. Molecular formula: C1₆H13F3N4O. Molecular weight: 334.30 (as free base). Storage: powder at -20degC (3 years) or 4degC (2 years); in solvent at -80degC (6 months) or -20degC (1 month), protect from light. Solubility: soluble in DMSO and DMF; slightly soluble in ethanol; practically insoluble in water. The compound is typically analyzed by chiral HPLC or reversed-phase HPLC with UV detection at 254 nm. Other names: Voriconazole N-oxide; Voriconazole EP Impurity A. Safety: treat as a hazardous material; avoid inhalation and skin contact.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H14F3N5O
Molecular Weight
349.31
Exact Mass
349.115
CAS #
137330-52-0
Related CAS #
Voriconazole; voriconazole impurity 1
PubChem CID
42052021
Appearance
Solid powder
Hydrogen Bond Donor Count
1
Rotatable Bond Count
5
Heavy Atom Count
25
Complexity
448
Defined Atom Stereocenter Count
2
SMILES
C[C@H](C1=NC=NC=C1F)[C@](CN2C=NC=N2)(C3=C(C=C(C=C3)F)F)O
InChi Key
BCEHBSKCWLPMDN-QLJPJBMISA-N
InChi Code
InChI=1S/C16H14F3N5O/c1-10(15-14(19)5-20-7-22-15)16(25,6-24-9-21-8-23-24)12-3-2-11(17)4-13(12)18/h2-5,7-10,25H,6H2,1H3/t10-,16-/m1/s1
Chemical Name
(2R,3R)-2-(2,4-difluorophenyl)-3-(5-fluoropyrimidin-4-yl)-1-(1,2,4-triazol-1-yl)butan-2-ol
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.8628 mL 14.3139 mL 28.6279 mL
5 mM 0.5726 mL 2.8628 mL 5.7256 mL
10 mM 0.2863 mL 1.4314 mL 2.8628 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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