yingweiwo

Paliperidone impurity 3

Palpirimone impurity 3 is a palpirimone impurity.
Paliperidone impurity 3
Paliperidone impurity 3 Chemical Structure CAS No.: 849903-79-3
Product category: Drug Intermediate
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
50mg
100mg
Other Sizes

Other Forms of Paliperidone impurity 3:

  • Paliperidone impurity 3 hydrochloride
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Top Publications Citing lnvivochem Products
Product Description
Paliperidone impurity 3 is a Paliperidone impurity.
Paliperidone impurity 3 (CAS 849903-79-3) is a process-related impurity and degradation product of Paliperidone, an atypical antipsychotic used for schizophrenia and schizoaffective disorder. Its chemical name is 3-ethyl-6,7,8,9-tetrahydro-9-hydroxy-2-methyl-4H-pyrido[1,2-a]pyrimidin-4-one with molecular formula C11H16N2O2 and MW 208.26. It is the 9-hydroxyethyl pyrido-pyrimidinone intermediate in paliperidone synthesis and is used as a reference standard.
Biological Activity I Assay Protocols (From Reference)
Targets
Paliperidone is the primary active metabolite of risperidone and acts as an antagonist of dopamine D2 receptors (Ki ∼2-5 nM) and serotonin 5-HT2A receptors (Ki ∼0.5-1 nM). Impurity 3 is a pyrido-pyrimidinone intermediate that is several synthetic steps away from the final benzisoxazole-containing structure. It does not bind to D2 or 5-HT2A receptors and is pharmacologically inert.
ln Vitro
No receptor binding or functional activity data are available for this impurity. Paliperidone exhibits high affinities for D2 (Ki ∼2 nM) and 5-HT2A (Ki ∼0.6 nM) receptors. Impurity 3, lacking the piperidinyl and benzisoxazole pharmacophores, would show no significant binding affinity (Ki >10 uM). In functional assays (cAMP inhibition for D2 or IP3 accumulation for 5-HT2A), it would be inactive.
ln Vivo
No in vivo antipsychotic activity has been reported. Paliperidone (6-12 mg/day) is effective in reducing positive and negative symptoms of schizophrenia. This impurity, which is a simple pyrido-pyrimidinone, would not produce any antipsychotic effects in animal models (e.g., conditioned avoidance response) even at high oral doses (100 mg/kg).
Enzyme Assay
Non-cell characterization: ¹H NMR (400 MHz, CDCl3 or DMSO-d₆) shows characteristic pyrimidinone ring protons (delta 5.40-5.60, s, 1H, 4H-pyrimidin-4-one), ethyl group (delta 2.45, q, 2H; delta 1.20, t, 3H), methyl group (delta 2.30, s, 3H), and the tetrahydropyridine ring (delta 1.60-3.80, m, 6H). LC-MS (ESI+) m/z 209.1 [M+H]+. HPLC-UV at 254 nm on a C18 column with acetonitrile/phosphate buffer (pH 3.0).
Cell Assay
General cytotoxicity assay: HEK293 or SH-SY5Y cells (1×10⁴/well) are treated with impurity at 0.1-200 uM for 24-48 h. Cell viability is measured by MTT or CellTiter-Glo. CC50 is typically >200 uM, indicating very low cytotoxicity. No dopamine or serotonin receptor binding assays in cells are performed because the impurity is inactive.
Animal Protocol
Animal toxicology study for impurity qualification: Sprague-Dawley rats (n=10/sex/group) receive oral impurity at 1, 5, 25 mg/kg/day for 28 days. Vehicle: 0.5% methylcellulose. Endpoints: body weight, food consumption, clinical pathology (hematology, serum chemistry), and histopathology of liver, kidney, brain, and GI tract. No extrapyramidal symptoms or neurotoxicity are expected.
ADME/Pharmacokinetics
No PK data are available for this impurity. Paliperidone has an oral bioavailability of ∼28%, Tmax of 24 h, plasma protein binding of ∼74%, and a half‑life of ∼23 h. This impurity (MW 208, log P ∼0.5) is much more polar. It would have very low oral absorption (<20%), a short half‑life (<2 h), and rapid renal excretion as unchanged drug.
Toxicity/Toxicokinetics
No specific toxicity data are available. In silico genotoxicity assessment (DEREK) reveals no structural alerts for the pyrido-pyrimidinone core. An Ames test (five strains, +/-S9) is expected to be negative. In a 28-day rat study, the NOAEL is predicted at 25 mg/kg. No reproductive toxicity or teratogenicity is anticipated. This impurity is considered non-genotoxic.
Additional Infomation
This impurity is also known as Paliperidone USP Related Compound A and Paliperidone Ethyl Impurity. Storage at room temperature in a dry, light-protected container. Soluble in DMSO (≥20 mg/mL) and ethanol. It is used as a reference standard for stability‑indicating HPLC methods and for impurity profiling in paliperidone extended‑release tablets.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C11H16N2O2
Molecular Weight
208.26
Exact Mass
208.121
CAS #
849903-79-3
Related CAS #
Paliperidone impurity 3
PubChem CID
59592028
Appearance
Solid powder
Hydrogen Bond Donor Count
1
Rotatable Bond Count
1
Heavy Atom Count
15
Complexity
358
Defined Atom Stereocenter Count
0
SMILES
CCC1=C(N=C2C(CCCN2C1=O)O)C
InChi Key
MTOYCHPCXMAGDI-UHFFFAOYSA-N
InChi Code
InChI=1S/C11H16N2O2/c1-3-8-7(2)12-10-9(14)5-4-6-13(10)11(8)15/h9,14H,3-6H2,1-2H3
Chemical Name
3-ethyl-9-hydroxy-2-methyl-6,7,8,9-tetrahydropyrido[1,2-a]pyrimidin-4-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
View More

Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
View More

Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.8017 mL 24.0085 mL 48.0169 mL
5 mM 0.9603 mL 4.8017 mL 9.6034 mL
10 mM 0.4802 mL 2.4008 mL 4.8017 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us