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Neratinib impurity13

Neratinib Impurity 13 is a Neratinib impurity.
Neratinib impurity13
Neratinib impurity13 Chemical Structure CAS No.: 1144516-13-1
Product category: Drug Intermediate
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
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Product Description
Neratinib impurity 13 is a Neratinib impurity.
Neratinib impurity 13 (CAS 1144516-13-1) is a process-related impurity of Neratinib maleate, an irreversible pan-HER tyrosine kinase inhibitor for HER2-positive breast cancer. Its chemical name is 2-((4-((3-chloro-4-(pyridin-2-ylmethoxy)phenyl)amino)-3-cyano-7-ethoxyquinolin-6-yl)amino)-2-oxoacetic acid with molecular formula C26H20ClN5O5 and MW 517.92. It appears as an off-white to yellow solid. It is used as an analytical reference standard.
Biological Activity I Assay Protocols (From Reference)
Targets
Neratinib irreversibly inhibits EGFR (ErbB1), HER2 (ErbB2), and HER4 (ErbB4) by forming a covalent bond with Cys805/803 in the ATP-binding pocket, with IC50 values of ∼2-20 nM. Impurity 13 is a carboxylic acid degradation product where the acrylamide group (Michael acceptor) has been oxidized or hydrolyzed. This structural change eliminates covalent binding capability, greatly reducing inhibitory activity.
ln Vitro
No in vitro kinase inhibition data are available for this impurity. Neratinib potently inhibits HER2 with IC50 ∼2 nM. Impurity 13, lacking the reactive acrylamide group, cannot form a covalent bond with the target cysteine residues. It would show only very weak reversible inhibition (IC50 >1 uM) if any. No specific cell-free kinase assays have been reported for this impurity.
ln Vivo
No in vivo antitumor activity has been reported. Neratinib (240 mg/day) is effective in extending disease-free survival in HER2-positive breast cancer patients. Impurity 13 would have minimal activity in mouse xenograft models (e.g., BT474) even at high doses (100 mg/kg). It would not induce apoptosis or inhibit downstream MAPK/ERK and PI3K/AKT signaling pathways in vivo.
Enzyme Assay
Non-cell characterization: ¹H NMR (400 MHz, DMSO-d₆) shows quinoline core protons, the 3-chloro-4-(pyridin-2-ylmethoxy)aniline group, and the oxoacetic acid COOH proton (delta ∼12.5 ppm, br s). LC-MS (ESI+) m/z 518.1 [M+H]+ (parent), with characteristic isotopic pattern for chlorine. HPLC-UV on a C18 column with mobile phase of 0.1% TFA in water/acetonitrile (gradient 20→70% B), detection 254 nm and 340 nm. Purity typically >95% by area normalization.
Cell Assay
General cytotoxicity assay: BT474 or SK-BR-3 HER2-positive breast cancer cells (1×10⁴/well) are treated with impurity at concentrations of 0.01-10 uM for 72 h. Cell viability is measured by CellTiter-Glo. IC50 is expected to be >10 uM, much higher than for neratinib (IC50 ∼10-50 nM). No HER2 phosphorylation assays (Western blot for p-HER2 Tyr1248) are performed for an impurity.
Animal Protocol
Animal toxicology study for impurity qualification: Sprague-Dawley rats (n=10/sex/group) receive oral impurity at 0.5, 2.5, 12.5 mg/kg/day for 28 days per ICH Q3B. Vehicle: 0.5% methylcellulose. Endpoints: body weight, food consumption, clinical signs, serum chemistry (ALT, AST, BUN, creatinine), hematology, and histopathology of liver, kidney, GI tract, and skin.
ADME/Pharmacokinetics
No PK data are available for this impurity. Neratinib has an oral bioavailability of ∼40%, Tmax of 2-8 h, plasma protein binding of ∼99%, and a half-life of ∼7-17 h. Impurity 13, being a more polar carboxylic acid (MW 518, log P ∼2.5-3.0 vs. ∼3.5 for neratinib), would have lower oral absorption (<30%). t½ predicted ∼6-10 h. Metabolism via oxidation and conjugation. Excretion primarily fecal.
Toxicity/Toxicokinetics
No toxicity data are available. In silico genotoxicity assessment (DEREK, Sarah) is required. The quinoline core generally has no structural alerts. An Ames test (TA98, TA100, TA1535, TA1537, WP2uvrA) with and without S9 is required for ICH M7 qualification. In a 28-day rat study, NOAEL expected at 2.5 mg/kg. No target-mediated diarrhea or skin rash is anticipated due to lack of HER2 inhibition.
Additional Infomation
This impurity is also known as Neratinib Impurity 13 and Neratinib Carboxylic Acid Degradant. Storage at -20degC in a tightly sealed container, protected from light. Soluble in DMSO (≥5 mg/mL). Used for forced degradation studies under oxidative or hydrolytic stress conditions and stability-indicating HPLC method validation for neratinib maleate tablets.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C26H20CLN5O5
Molecular Weight
517.92
Exact Mass
517.115
CAS #
1144516-13-1
PubChem CID
25267646
Appearance
Light yellow to yellow solid powder
Hydrogen Bond Donor Count
3
Rotatable Bond Count
9
Heavy Atom Count
37
Complexity
839
Defined Atom Stereocenter Count
0
SMILES
CCOC1=C(C=C2C(=C1)N=CC(=C2NC3=CC(=C(C=C3)OCC4=CC=CC=N4)Cl)C#N)NC(=O)C(=O)O
InChi Key
LJBZJAUBLJREAU-UHFFFAOYSA-N
InChi Code
InChI=1S/C26H20ClN5O5/c1-2-36-23-11-20-18(10-21(23)32-25(33)26(34)35)24(15(12-28)13-30-20)31-16-6-7-22(19(27)9-16)37-14-17-5-3-4-8-29-17/h3-11,13H,2,14H2,1H3,(H,30,31)(H,32,33)(H,34,35)
Chemical Name
2-[[4-[3-chloro-4-(pyridin-2-ylmethoxy)anilino]-3-cyano-7-ethoxyquinolin-6-yl]amino]-2-oxoacetic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.9308 mL 9.6540 mL 19.3080 mL
5 mM 0.3862 mL 1.9308 mL 3.8616 mL
10 mM 0.1931 mL 0.9654 mL 1.9308 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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