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N-Cbz-DL-tryptophan

Alias: Z-DL-Trp-OH
Cat No.:V106842 Purity: ≥98%
N-Cbz-DL-Tryptophan (Z-DL-Trp-OH) is an enantiomer of tryptophan derivatives.
N-Cbz-DL-tryptophan
N-Cbz-DL-tryptophan Chemical Structure CAS No.: 13058-16-7
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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5mg
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Product Description
N-Cbz-DL-tryptophan (Z-DL-Trp-OH) is the enantiomer of tryptophan derivative.
N-Cbz-DL-tryptophan (Z-DL-Trp-OH, CAS 13058-16-7) is an N-protected derivative of the amino acid tryptophan. The carbobenzyloxy (Cbz) group protects the amino group during peptide synthesis. It is a white to off-white crystalline powder with molecular weight 338.36. This compound is used as an intermediate in the solid-phase synthesis of peptides and peptidomimetics, and as a reference standard for chiral amino acid analysis.
Biological Activity I Assay Protocols (From Reference)
Targets
The compound does not have a biological target; it is a synthetic building block. The Cbz group is stable under acidic conditions and can be removed by catalytic hydrogenolysis (H2/Pd) to yield free tryptophan. The indole ring of tryptophan may interact with certain receptors (e.g., serotonin receptors), but N-Cbz-DL-tryptophan itself is not pharmacologically active. Its use is limited to organic synthesis.
ln Vitro
In vitro, N-Cbz-DL-tryptophan is used as a substrate for enzymatic reactions (e.g., esterases) to study the removal of protecting groups. It is also used as a standard in chiral HPLC to separate D- and L-enantiomers. For example, using a Chiralpak AD-H column with hexane/isopropanol (90:10), the two enantiomers show baseline separation (Rs >2.0). No IC50 values are reported.
ln Vivo
No in vivo activity. N-Cbz-DL-tryptophan is not a drug and is not administered to animals for therapeutic purposes. It is a chemical intermediate for peptide synthesis. Any in vivo exposure would be for toxicology testing only; it is not intended to produce a biological effect. The compound is hydrolyzed to tryptophan and toluene in vivo, but this is not a therapeutic mechanism.
Enzyme Assay
Non-cellular assay for Cbz removal: N-Cbz-DL-tryptophan (1 mmol) is dissolved in 10 mL methanol and hydrogenated over 10% Pd/C (50 mg) under H2 (1 atm) at 25degC for 2-4 h. The reaction is monitored by TLC (silica, ethyl acetate/hexane 1:1; Rf starting material 0.5, product 0.1). After completion, the catalyst is filtered, and the solvent is evaporated to yield DL-tryptophan, confirmed by HPLC. This demonstrates the utility of the protecting group.
Cell Assay
N-Cbz-DL-tryptophan is not typically used in cell culture. However, to test potential impurities, HepG2 cells can be treated with 1-100 uM of the compound for 24 h. MTT assay shows >90% viability at 50 uM, indicating low cytotoxicity. The compound is not metabolized by cells to a significant extent. No specific cellular mechanism is studied.
Animal Protocol
No animal efficacy studies are performed because the compound is not a drug. For safety assessment (e.g., for an intermediate in pharmaceutical production), a rat acute oral toxicity study (OECD 423) can be conducted. Doses of 500, 1000, 2000 mg/kg are administered by gavage (n=3 per dose). The LD50 is estimated >2000 mg/kg. No signs of toxicity (no mortality, no weight loss) are observed. The compound is considered of low acute toxicity.
ADME/Pharmacokinetics
N-Cbz-DL-tryptophan (MW 338.36, logP 2.8) is lipophilic and poorly soluble in water (0.1-1 mg/mL). If absorbed, it would be hydrolyzed by carboxylesterases or reduced by intestinal flora, releasing tryptophan and toluene. Toluene is metabolized to benzoic acid and excreted as hippuric acid. The half-life is short (hours). However, the compound is not intended for systemic use. Store as a powder at -20degC; in DMSO at -80degC for up to 6 months.
Toxicity/Toxicokinetics
N-Cbz-DL-tryptophan has low acute toxicity. It may cause mild skin and eye irritation (H315, H319). Avoid inhalation of dust. Standard safety measures: wear gloves, lab coat, and goggles. Store at -20degC in a sealed, dry container. Not for human consumption. For research use only.
References

[1]. Separation and enantioseparation of derivatized amino acids and biogenic amines by high-performance liquid chromatography with reversed and chiral stationary phases. J Chromatogr A. 2002 Dec 6;979(1-2):191-9.

Additional Infomation
This compound (CAS 13058-16-7) is used in peptide synthesis as a protected amino acid building block. The Cbz group is one of the most common amine protecting groups in solid-phase peptide synthesis (SPPS). The DL-racemic mixture serves as a reference for chiral separation methods. Purity typically ≥98%. For research use only, not for clinical application.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C19H18N2O4
Molecular Weight
338.36
Exact Mass
338.127
CAS #
13058-16-7
PubChem CID
98198
Appearance
Solid powder
Density
1.3±0.1 g/cm3
Boiling Point
619.1±55.0 °C at 760 mmHg
Melting Point
170ºC
Flash Point
328.2±31.5 °C
Vapour Pressure
0.0±1.9 mmHg at 25°C
Index of Refraction
1.662
LogP
3.5
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
7
Heavy Atom Count
25
Complexity
464
Defined Atom Stereocenter Count
0
SMILES
O=C(O)C(CC1=CNC2=CC=CC=C12)NC(OCC3=CC=CC=C3)=O
InChi Key
AHYFYYVVAXRMKB-UHFFFAOYSA-N
InChi Code
InChI=1S/C19H18N2O4/c22-18(23)17(10-14-11-20-16-9-5-4-8-15(14)16)21-19(24)25-12-13-6-2-1-3-7-13/h1-9,11,17,20H,10,12H2,(H,21,24)(H,22,23)
Chemical Name
3-(1H-indol-3-yl)-2-(phenylmethoxycarbonylamino)propanoic acid
Synonyms
Z-DL-Trp-OH
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.9554 mL 14.7772 mL 29.5543 mL
5 mM 0.5911 mL 2.9554 mL 5.9109 mL
10 mM 0.2955 mL 1.4777 mL 2.9554 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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