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MS8511 hydrochloride

Cat No.:V103386 Purity: ≥98%
MS8511 (hydrochloride) is a selective, covalent, irreversible G9a/GLP inhibitor targeting the cysteine residue in the substrate binding site, with IC50 values of 100 nM (G9a) and 140 nM (GLP), and Kd values of 44 nM (G9a) and 46 nM (GLP).
MS8511 hydrochloride
MS8511 hydrochloride Chemical Structure CAS No.: 3031788-28-7
Product category: Histone Methyltransferase
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
10mg
Other Sizes

Other Forms of MS8511 hydrochloride:

  • MS8511
Official Supplier of:
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Product Description
MS8511 (hydrochloride) is a selective, covalent, irreversible inhibitor of G9a/GLP, targeting the cysteine residue in the substrate binding site, with IC50 values of 100 nM (G9a) and 140 nM (GLP), and Kd values of 44 nM (G9a) and 46 nM (GLP). MS8511 (hydrochloride) reduces intracellular H3K9me2 levels and enhances antiproliferative activity. MS8511 (hydrochloride) can be used to study a variety of cancers (including brain cancer, breast cancer, ovarian cancer, lung cancer, bladder cancer, melanoma, colorectal cancer) and other diseases such as Alzheimer's disease (AD), sickle cell disease, and Prader-Willi syndrome (PWS).
MS8511 hydrochloride is a selective, covalent, irreversible inhibitor of the protein lysine methyltransferases G9a (EHMT2) and GLP (EHMT1). It specifically targets a cysteine residue within the substrate binding site of these enzymes. MS8511 hydrochloride is designed for research applications in epigenetics and cancer biology, with potential applications in Alzheimer‘s disease (AD), sickle cell disease, and Prader-Willi syndrome (PWS).
Biological Activity I Assay Protocols (From Reference)
Targets
G9a (EHMT2) and GLP (EHMT1), which are histone methyltransferases responsible for the mono- and dimethylation of histone H3 at lysine 9 (H3K9me1/H3K9me2). These enzymes play a crucial role in transcriptional repression and are involved in the pathogenesis of various cancers and neurological disorders.
ln Vitro
MS8511 hydrochloride exhibits potent inhibitory activity against G9a with an IC50 of 100 nM and against GLP with an IC50 of 140 nM. It binds to G9a with a Kd of 44 nM and to GLP with a Kd of 46 nM. The compound effectively reduces intracellular H3K9me2 levels and enhances antiproliferative activity in a concentration-dependent manner at 0-5 uM over 24-72 hours.
ln Vivo
No specific in vivo data is available for MS8511 hydrochloride. The compound is indicated for studying a variety of cancers (including brain, breast, ovarian, lung, bladder, melanoma, colorectal) and diseases such as Alzheimer's, sickle cell disease, and PWS, but detailed animal model studies have not been reported in the available literature.
Enzyme Assay
Typical G9a/GLP inhibition assay (radiolabeled SAM assay): incubate recombinant G9a (0.1-1 ug) with 50 mM Tris-HCl pH 8.5, 10 mM DTT, 0.01% Triton X-100, 1 uM [3H]-SAM (S-adenosylmethionine), and 10 uM H3 peptide substrate (residues 1-21) in a total volume of 50 uL at room temperature for 1-2 hours. MS8511 is added at varying concentrations (1-1000 nM). The reaction is spotted onto P81 filter paper and washed with 10 mM NaHCO3, and radioactivity is counted.
Cell Assay
Standard cell viability protocol: culture cancer cell lines (e.g., U87 glioblastoma or MDA-MB-231 breast) in DMEM+10% FBS in 96-well plates. Treat with MS8511 hydrochloride (0.1-50 uM) for 24-72 hours. Assess H3K9me2 levels by Western blot with specific antibody. Measure anti-proliferative activity by MTT assay. Apoptosis is measured by caspase-3/7 activity or Annexin V/PI staining.
Animal Protocol
No published in vivo data was found for MS8511 hydrochloride. A general protocol for evaluating G9a/GLP inhibitors in vivo would involve establishing subcutaneous xenografts of cancer cell lines in nude mice (e.g., 5×10⁶ U87 cells/injection). When tumors reach ~100 mm3, mice would be randomized to receive MS8511 (e.g., 10-50 mg/kg, IP or oral) or vehicle daily for 3-4 weeks. Tumor volume measured twice weekly, and tumors harvested for H3K9me2 IHC.
ADME/Pharmacokinetics
No PK data were found. As a covalent irreversible inhibitor targeting a cysteine residue, MS8511 hydrochloride would be expected to exhibit prolonged target engagement in vivo. Standard PK studies would involve IV/oral administration in rodents, plasma collection, and LC-MS/MS analysis to determine clearance, half-life, and oral bioavailability.
Toxicity/Toxicokinetics
No specific toxicological data is available. As a covalent inhibitor, off-target toxicity is a potential concern, but no formal evaluations have been reported. Standard preclinical safety assessments would include a 7-day repeat-dose oral toxicity study in rats with histopathological examination of major organs.
References

[1]. Discovery of the First-in-Class G9a/GLP Covalent Inhibitors. J Med Chem. 2022 Jun 28.

Additional Infomation
MS8511 hydrochloride (CAS: 3031788-28-7) is supplied as a research-grade compound with molecular formula C28H42ClN5O3 and molecular weight 556.11. It exhibits covalent and irreversible inhibition characteristics. It reduces intracellular H3K9me2 levels and enhances anti-proliferative activity. It is soluble in methanol (~30 mg/mL). Each product in one row, fields tab-separated.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C28H42CLN5O3
Molecular Weight
532.12
Exact Mass
531.298
CAS #
3031788-28-7
Related CAS #
MS8511;2866408-21-9
PubChem CID
171360694
Appearance
Off-white to light yellow solid powder
Hydrogen Bond Donor Count
3
Rotatable Bond Count
11
Heavy Atom Count
37
Complexity
693
Defined Atom Stereocenter Count
0
SMILES
CC(C)N1CCC(CC1)NC2=CC(=NC3=CC(=C(C=C32)OC)OCCCN4CCCC4)NC(=O)C=C.Cl
InChi Key
JRCSOGLIHWDWKN-UHFFFAOYSA-N
InChi Code
InChI=1S/C28H41N5O3.ClH/c1-5-28(34)31-27-19-24(29-21-9-14-33(15-10-21)20(2)3)22-17-25(35-4)26(18-23(22)30-27)36-16-8-13-32-11-6-7-12-32;/h5,17-21H,1,6-16H2,2-4H3,(H2,29,30,31,34);1H
Chemical Name
N-[6-methoxy-4-[(1-propan-2-ylpiperidin-4-yl)amino]-7-(3-pyrrolidin-1-ylpropoxy)quinolin-2-yl]prop-2-enamide;hydrochloride
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
Methanol : ~30 mg/mL (~56.38 mM; with ultrasonication)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.8793 mL 9.3964 mL 18.7928 mL
5 mM 0.3759 mL 1.8793 mL 3.7586 mL
10 mM 0.1879 mL 0.9396 mL 1.8793 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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