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Podophyllotoxin glucoside

Cat No.:V48977 Purity: ≥98%
Podophyllotoxin glucoside is a podophyllotoxin analogue with anti-tumor effects.
Podophyllotoxin glucoside
Podophyllotoxin glucoside Chemical Structure CAS No.: 16481-54-2
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
Other Sizes
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Product Description
Podophyllotoxin glucoside is a podophyllotoxin analogue with anti-tumor effects.
Podophyllotoxin glucoside is a naturally occurring aryltetralin lignan glycoside isolated from plants like *Podophyllum peltatum*. It is a derivative of podophyllotoxin, modified by the attachment of a glucose molecule to enhance its solubility and bioavailability. As a derivative, its primary mechanism of action is the inhibition of the enzyme topoisomerase II, a crucial protein for DNA replication. This leads to cell cycle arrest and apoptosis in rapidly dividing cancer cells.
Biological Activity I Assay Protocols (From Reference)
Targets
Podophyllotoxin glucoside targets topoisomerase II, an essential enzyme that manages DNA topology during replication. By inhibiting topoisomerase II, the compound prevents the relegation of DNA strands, leading to the accumulation of DNA breaks and ultimately triggering cell death. Its activity as a topoisomerase II inhibitor classifies it as an antineoplastic agent.
ln Vitro
Podophyllotoxin glucoside has demonstrated anticancer activity against various cancer cell lines, including HeLa, KB, and GLC4. Its cytotoxicity is attributed to the inhibition of topoisomerase II, which interferes with DNA replication and leads to apoptosis. Studies show that it can effectively inhibit tumor cell growth and induce apoptosis, suggesting it is a potential active ingredient for anticancer therapy.
ln Vivo
In vivo data for Podophyllotoxin glucoside is limited in the available literature. As a derivative of podophyllotoxin with anti-tumor effects, it is expected to exhibit anticancer activity in animal models. Its mechanism of action, involving the inhibition of topoisomerase II, is well-characterized. However, specific in vivo efficacy data and detailed animal model studies are not extensively detailed in the public domain.
Enzyme Assay
The in vitro biochemical activity of Podophyllotoxin glucoside is typically assessed through assays measuring its inhibition of topoisomerase II. The compound is incubated with the enzyme and its DNA substrate. The inhibition of the enzyme's catalytic activity, which prevents DNA strand relegation, is then measured. This can be done by analyzing the accumulation of linear or cleaved DNA products via gel electrophoresis. The compound is dissolved in DMSO and diluted in the appropriate assay buffer.
Cell Assay
In vitro cellular assays for Podophyllotoxin glucoside involve treating cancer cell lines, such as HeLa, KB, and GLC4, with the compound at various concentrations for 24-72 hours. Cell viability is then assessed using standard assays like MTT or CellTiter-Glo. The compound's effect on the cell cycle is analyzed via flow cytometry, and its ability to induce apoptosis is confirmed through methods like Annexin V/PI staining or caspase activity assays.
Animal Protocol
In vivo animal studies for Podophyllotoxin glucoside, while not extensively documented, would typically involve administering the compound to mice bearing tumor xenografts derived from sensitive cancer cell lines. Tumor growth inhibition would be monitored, and the compound's pharmacokinetics and pharmacodynamics would be evaluated. The compound is typically formulated in a vehicle such as 10% DMSO, 40% PEG300, 5% Tween-80, and 45% saline for in vivo administration.
ADME/Pharmacokinetics
Podophyllotoxin glucoside has a molecular weight of 576.55 g/mol and the formula C28H32O13. It is a solid, typically yellow in appearance, and is soluble in DMSO (40-50 mg/mL). It is recommended to store the powder at -20°C for up to 3 years and in solvent at -80°C for up to 1 year. Its density is 1.55 g/cm³.
Toxicity/Toxicokinetics
As a naturally occurring compound and a derivative of podophyllotoxin, a known anticancer agent, it is generally considered to have potential toxicity. Podophyllotoxin and its derivatives can have significant side effects, including gastrointestinal issues and myelosuppression. Therefore, appropriate safety precautions are necessary when handling. As a research compound, standard preclinical toxicity assessments, including acute and repeated-dose studies, would be required to fully establish its safety profile.
References

[1]. Etoposide: four decades of development of a topoisomerase II inhibitor. Eur J Cancer.

Additional Infomation
Podophyllotoxin glucoside has been reported to be found in Podophyllum peltatum, Catharanthus flax, and other organisms with relevant data. Physiologically active prostaglandins are present in many tissues and organs. They are potent pressor substances and possess many other physiological activities.
Podophyllotoxin glucoside (CAS 16481-54-2) is a natural product found in plants such as *Podophyllum peltatum* and *Linum catharticum*. Its mechanism of action as an anticancer agent is through the inhibition of topoisomerase II. This is in contrast to its parent compound, podophyllotoxin, which primarily inhibits microtubule assembly. As a lignan compound, it is used in research for its potential in cancer therapy. This product is for research use only and is not for human therapeutic applications.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C28H32O13
Molecular Weight
576.54588
Exact Mass
576.184
CAS #
16481-54-2
PubChem CID
161177
Appearance
White to off-white solid powder
Density
1.5±0.1 g/cm3
Boiling Point
781.3±60.0 °C at 760 mmHg
Melting Point
152-154℃
Flash Point
258.2±26.4 °C
Vapour Pressure
0.0±2.8 mmHg at 25°C
Index of Refraction
1.660
LogP
-0.66
Hydrogen Bond Donor Count
4
Hydrogen Bond Acceptor Count
13
Rotatable Bond Count
7
Heavy Atom Count
41
Complexity
907
Defined Atom Stereocenter Count
9
SMILES
COC1=CC(=CC(=C1OC)OC)[C@H]2[C@@H]3[C@H](COC3=O)[C@H](C4=CC5=C(C=C24)OCO5)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O
InChi Key
NXVJTGLCCSFGAT-QNDDJFOYSA-N
InChi Code
InChI=1S/C28H32O13/c1-34-17-4-11(5-18(35-2)26(17)36-3)20-12-6-15-16(39-10-38-15)7-13(12)25(14-9-37-27(33)21(14)20)41-28-24(32)23(31)22(30)19(8-29)40-28/h4-7,14,19-25,28-32H,8-10H2,1-3H3/t14-,19+,20+,21-,22+,23-,24+,25-,28-/m0/s1
Chemical Name
(5R,5aR,8aR,9R)-5-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9-(3,4,5-trimethoxyphenyl)-5a,6,8a,9-tetrahydro-5H-[2]benzofuro[6,5-f][1,3]benzodioxol-8-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.7345 mL 8.6723 mL 17.3445 mL
5 mM 0.3469 mL 1.7345 mL 3.4689 mL
10 mM 0.1734 mL 0.8672 mL 1.7345 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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