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pGlu-Pro-Arg-MNA

Cat No.:V33281 Purity: ≥98%
pGlu-Pro-Arg-MNA is a chromogenic substrate.
pGlu-Pro-Arg-MNA
pGlu-Pro-Arg-MNA Chemical Structure CAS No.: 130835-45-9
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price
500mg
1g
Other Sizes

Other Forms of pGlu-Pro-Arg-MNA:

  • pGlu-Pro-Arg-MNA monoacetate
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
pGlu-Pro-Arg-MNA is a chromogenic substrate.
pGlu-Pro-Arg-MNA is a synthetic tripeptide chromogenic substrate with the sequence pyroglutamyl-prolyl-arginine linked to a 4-methoxy-β-naphthylamide (MNA) reporter group. Its molecular formula is C23H32N8O7 with a molecular weight of 532.55. The substrate is cleaved by serine proteases, particularly those with specificity for arginine at the P1 position, including thrombin, factor Xa, and trypsin-like enzymes. Cleavage releases MNA, which can be detected by colorimetric or fluorometric methods. It is used as a research tool for measuring protease activity in biological samples.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of pGlu-Pro-Arg-MNA is serine proteases that recognize the pGlu-Pro-Arg sequence. This sequence is a known substrate motif for thrombin and other coagulation factors. The substrate is cleaved after the arginine residue, releasing free MNA. The rate of MNA release is proportional to protease activity and can be quantified by absorbance at 340 nm (after diazotization) or by fluorescence (excitation 340 nm, emission 425 nm).
ln Vitro
Using reagents such as a chromogenic substrate (pGlu-Pro-Arg-mNA) and a partial thromboplastin time (aPTT) system, protein C activity is determined by photometric analysis [1].
In vitro, pGlu-Pro-Arg-MNA is used to measure the activity of purified proteases or proteases in biological samples. The substrate is incubated with the protease in assay buffer, and MNA release is monitored continuously by absorbance or fluorescence. The assay is used to determine kinetic parameters (Km, Vmax) and to screen for protease inhibitors. It is particularly useful for measuring thrombin activity in plasma or purified systems.
ln Vivo
In vivo activity data for pGlu-Pro-Arg-MNA are not applicable, as it is an in vitro diagnostic substrate. It is not administered to animals. The substrate is used ex vivo to measure protease activity in plasma, tissue homogenates, or other biological samples collected from animals or humans. It serves as an analytical tool for studying protease function in physiological and pathological conditions.
Enzyme Assay
For non-cellular enzyme assays, pGlu-Pro-Arg-MNA is dissolved in DMSO or water and added to protease samples in assay buffer (e.g., Tris-HCl, pH 8.0, containing NaCl and CaCl2). The reaction is monitored continuously at 37°C by measuring absorbance at 340 nm (after diazotization with fast blue B) or fluorescence (excitation 340 nm, emission 425 nm). The initial rate of MNA release is used to calculate enzyme activity.
Cell Assay
For cell-based assays, pGlu-Pro-Arg-MNA is not used directly on cells, as it is a substrate for extracellular or secreted proteases. Cell culture supernatants or cell lysates are collected and incubated with the substrate to measure protease activity. This approach is used to study protease secretion by cells or protease activation in cell lysates. Cell viability is assessed separately by MTT assay.
Animal Protocol
For in vivo experiments, pGlu-Pro-Arg-MNA is not administered to animals. It is used ex vivo to measure protease activity in biological samples. For example, plasma is collected from animals treated with anticoagulants or protease inhibitors, and thrombin activity is measured using the substrate. Tissue homogenates are prepared and assayed for protease activity. The substrate provides a sensitive and specific method for quantifying protease activity in complex biological matrices.
References
[1]. Girolami A, et al. Heterozygous protein-S deficiency: a study of a large kindred. Acta Haematol. 1990;84(3):162-8.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C23H32N8O7
Molecular Weight
532.55
Exact Mass
532.239
CAS #
130835-45-9
Related CAS #
pGlu-Pro-Arg-MNA monoacetate;2070009-26-4
PubChem CID
92044478
Sequence
{pGlu}-Pro-Arg-MNA{pGlu}-PR-MNA
SequenceShortening
{pGlu}-PR-MNA
Appearance
Typically exists as solid at room temperature
tPSA
227
Hydrogen Bond Donor Count
5
Rotatable Bond Count
10
Heavy Atom Count
38
Complexity
935
Defined Atom Stereocenter Count
3
SMILES
COC1=C(C=CC(=C1)[N+](=O)[O-])NC(=O)[C@H](CCCN=C(N)N)NC(=O)[C@@H]2CCCN2C(=O)[C@@H]3CCC(=O)N3
InChi Key
PWEMRMLJCWKESY-ULQDDVLXSA-N
InChi Code
InChI=1S/C23H32N8O7/c1-38-18-12-13(31(36)37)6-7-14(18)28-20(33)15(4-2-10-26-23(24)25)29-21(34)17-5-3-11-30(17)22(35)16-8-9-19(32)27-16/h6-7,12,15-17H,2-5,8-11H2,1H3,(H,27,32)(H,28,33)(H,29,34)(H4,24,25,26)/t15-,16-,17-/m0/s1
Chemical Name
(2S)-N-[(2S)-5-(diaminomethylideneamino)-1-(2-methoxy-4-nitroanilino)-1-oxopentan-2-yl]-1-[(2S)-5-oxopyrrolidine-2-carbonyl]pyrrolidine-2-carboxamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
H2O
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution → 50 μL Tween 80 → 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300 :Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO → 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO → 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin → 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO → 100 μLPEG300 → 200 μL castor oil → 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol → 100 μL Cremophor → 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH → 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300:Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH → 400 μLPEG300 → 50 μL Tween 80 → 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.8778 mL 9.3888 mL 18.7776 mL
5 mM 0.3756 mL 1.8778 mL 3.7555 mL
10 mM 0.1878 mL 0.9389 mL 1.8778 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration: mg/mL;

Method for preparing DMSO stock solution: mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation::Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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