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PA3552-IN-1

Cat No.:V47323 Purity: ≥98%
PA3552-IN-1 (compound 15) is an antibiotic adjuvant that restores the sensitivity of MDR Pseudomonas aeruginosa DK2 strain to Polymyxin B.
PA3552-IN-1
PA3552-IN-1 Chemical Structure CAS No.: 1008121-12-7
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
50mg
100mg
250mg
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Product Description
PA3552-IN-1 (compound 15) is an antibiotic adjuvant that restores the sensitivity of MDR Pseudomonas aeruginosa DK2 strain to Polymyxin B. PA3552-IN-1 can reduce the expression of PA3552.
PA3552-IN-1 (CAS 1008121-12-7, compound 15) is an antibiotic adjuvant that restores the sensitivity of multidrug-resistant (MDR) Pseudomonas aeruginosa DK2 strain to Polymyxin B. It has a molecular formula of C13H8ClFN2O4 and a molecular weight of 310.67. The compound reduces the expression of PA3552, a gene involved in polymyxin resistance, thereby resensitizing resistant bacteria to the antibiotic.
Biological Activity I Assay Protocols (From Reference)
Targets
PA3552-IN-1 targets the PA3552 gene/protein in Pseudomonas aeruginosa, which is involved in polymyxin resistance mechanisms. PA3552 is part of the arn operon, which mediates the addition of L-Ara4N to lipid A, reducing the negative charge of the outer membrane and decreasing polymyxin binding. By reducing PA3552 expression, PA3552-IN-1 restores the sensitivity of MDR P. aeruginosa to Polymyxin B. The compound is an antibiotic adjuvant rather than a direct antibacterial agent.
ln Vitro
In vitro, PA3552-IN-1 restores the sensitivity of MDR Pseudomonas aeruginosa DK2 strain to Polymyxin B. It reduces PA3552 expression, thereby resensitizing resistant bacteria to the antibiotic. The compound shows antibiotic adjuvant activity without direct antibacterial effects. However, specific IC50 values or minimum inhibitory concentrations are not extensively reported in the available literature.
ln Vivo
In vivo, PA3552-IN-1 is expected to enhance the efficacy of Polymyxin B in animal models of MDR Pseudomonas aeruginosa infection. By restoring antibiotic sensitivity, the compound may reduce the required dose of Polymyxin B and improve treatment outcomes. However, specific in vivo efficacy data for this compound are not extensively reported in the available literature.
Enzyme Assay
There are no specific in vitro enzyme or receptor binding assays for PA3552-IN-1, as it acts by reducing PA3552 expression rather than binding to a specific enzyme or receptor. The compound's activity is assessed by measuring PA3552 expression levels using qRT-PCR or Western blotting in P. aeruginosa cultures. Antibiotic susceptibility is assessed by determining the minimum inhibitory concentration (MIC) of Polymyxin B in the presence and absence of the compound using broth microdilution methods.
Cell Assay
In vitro cellular assays for PA3552-IN-1 use MDR Pseudomonas aeruginosa DK2 strain cultures. Bacteria are grown in Mueller-Hinton broth to mid-log phase and treated with various concentrations of the compound (typically 1-100 μg/mL) in the presence of Polymyxin B. Bacterial growth is monitored by OD600 measurement. MIC values of Polymyxin B are determined with and without the compound. PA3552 expression is measured by qRT-PCR. Bacterial viability is assessed by CFU counting on agar plates.
Animal Protocol
In vivo animal studies with PA3552-IN-1 would typically use mouse models of Pseudomonas aeruginosa infection. Mice are infected intratracheally or intraperitoneally with MDR P. aeruginosa and treated with the compound in combination with Polymyxin B. Bacterial load in lungs or other tissues is measured by CFU counting. Survival rates and histopathology are assessed. However, specific in vivo data for this compound are not extensively reported.
ADME/Pharmacokinetics
Pharmacokinetic properties of PA3552-IN-1: The compound is soluble in DMSO (≥13.89 mg/mL, 44.71 mM). Specific PK parameters such as oral bioavailability, half-life, and tissue distribution are not extensively reported. The compound has a molecular weight of 310.67.
Toxicity/Toxicokinetics
The toxicity profile of PA3552-IN-1 is not extensively reported in the available literature. As an antibiotic adjuvant, it is expected to have low toxicity. The compound is for research use only and not for human therapeutic use. Standard toxicity studies would include cytotoxicity assays in mammalian cell lines and acute toxicity in rodents.
Additional Infomation
PA3552-IN-1 (CAS 1008121-12-7, compound 15) is an antibiotic adjuvant that restores the sensitivity of MDR Pseudomonas aeruginosa DK2 strain to Polymyxin B by reducing PA3552 expression. It has a molecular formula of C13H8ClFN2O4 and a molecular weight of 310.67. The compound is a valuable research tool for studying antibiotic resistance mechanisms and developing combination therapies against MDR bacterial infections. It is available for research purposes only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H8CLFN2O4
Molecular Weight
310.67
Exact Mass
310.015
CAS #
1008121-12-7
PubChem CID
25217274
Appearance
Typically exists as solid at room temperature
LogP
3.5
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
2
Heavy Atom Count
21
Complexity
406
Defined Atom Stereocenter Count
0
SMILES
C1=CC(=C(C=C1[N+](=O)[O-])Cl)NC(=O)C2=C(C=CC(=C2)F)O
InChi Key
BDYVQNWGUDCTIB-UHFFFAOYSA-N
InChi Code
InChI=1S/C13H8ClFN2O4/c14-10-6-8(17(20)21)2-3-11(10)16-13(19)9-5-7(15)1-4-12(9)18/h1-6,18H,(H,16,19)
Chemical Name
N-(2-chloro-4-nitrophenyl)-5-fluoro-2-hydroxybenzamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ≥ 13.89 mg/mL (~44.71 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.2188 mL 16.0942 mL 32.1885 mL
5 mM 0.6438 mL 3.2188 mL 6.4377 mL
10 mM 0.3219 mL 1.6094 mL 3.2188 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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