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PA-9

Alias: PA9; PA 9; PA-9
Cat No.:V21392 Purity: ≥98%
PA-9 is a pituitary adenylate cyclase-activating polypeptide (PACAP) type I (PAC1) receptor blocker (antagonist).
PA-9
PA-9 Chemical Structure CAS No.: 1436004-46-4
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
100mg
Other Sizes
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Product Description
PA-9 is a pituitary adenylate cyclase-activating polypeptide (PACAP) type I (PAC1) receptor blocker (antagonist). PA-9 concentration-dependently inhibits PACAP-induced cAMP elevation with IC50 of 5.6 nM. PA-9 may be utilized to study neuropathic and/or inflammatory pain.
PA-9 is a small-molecule antagonist of the pituitary adenylate cyclase-activating polypeptide (PACAP) type I (PAC1) receptor. It is the first small-molecule PAC1 receptor antagonist. PA-9 concentration-dependently inhibits PACAP-induced cAMP elevation with an IC50 of 5.6 nM. The compound can be used for the research of neuropathic pain and/or inflammatory pain.
Biological Activity I Assay Protocols (From Reference)
Targets
PAC1 receptor (pituitary adenylate cyclase-activating polypeptide type I receptor).
ln Vitro
In CHO cells expressing the PAC1 receptor, PA-9 (10 pM to 10 nM; 30 minutes) dose-dependently suppresses PACAP-induced (1 nM) CREB phosphorylation [1].
PA-9 is a potent antagonist of the PAC1 receptor with an IC50 of 5.6 nM for inhibiting PACAP-induced cAMP elevation. It is the first small-molecule PAC1 receptor antagonist. The compound blocks PACAP-mediated signaling, which plays a role in pain pathways.
ln Vivo
When co-injected with PACAP, PA-9 (100 pmol) reduces the development of intrathecal PACAP-induced (100 pmol/5 μL) unpleasant reactions in mice [1]. When co-injected with PACAP, PA-9 (100 pmol) effectively prevents the induction of mechanical allodynia (100 pmol) caused by PACAP [1]. In mice, intrathecal injection of PA-9 (100 pmol/5 μl) does not cause mechanical allodynia or elicit unpleasant reactions [1]. The PAC1 receptor's subpocket, which is made up of L80, F81, I83, G91, V92, P107, A112, and C113, is a good fit for PA-9, which precipitates there through hydrophobic interactions [1].
In vivo, PA-9 has been studied for its potential in treating neuropathic and inflammatory pain. As a PAC1 receptor antagonist, it blocks the effects of PACAP, a neuropeptide involved in pain transmission. The compound shows promise in pain research.
Enzyme Assay
PAC1 receptor binding affinity is assessed using in vitro radioligand binding assays with cells expressing the recombinant PAC1 receptor. Antagonist activity is evaluated by measuring the inhibition of PACAP-induced cAMP accumulation in these cells. IC50 values are calculated from dose-response curves.
Cell Assay
Cellular activity is evaluated in cells expressing the PAC1 receptor. Cells are treated with PA-9 and stimulated with PACAP. The levels of cAMP are measured by ELISA or HTRF-based assays. The compound's ability to inhibit PACAP-induced cAMP elevation is assessed.
Animal Protocol
Animal/Disease Models: Male ddY mice (6 weeks old at the beginning of the experiment; intrathecal injection of 100 pmol/5 μL PACAP) [1]
Doses: intrathecal injection, coinjected with PACAP.
Route of Administration: 100 pmol/5 μL
Experimental Results: Attenuation of the development of PACAP-induced aversive responses. Blocking PACAP-induced mechanical allodynia.
In vivo efficacy is studied in animal models of neuropathic and inflammatory pain. PA-9 is administered via various routes (e.g., intrathecal, intraperitoneal). Pain responses are assessed using behavioral tests such as von Frey filaments, hot plate, or formalin-induced paw licking. The compound's analgesic effects are evaluated.
ADME/Pharmacokinetics
PA-9 has a molecular formula of C17H18N6O2 and a molecular weight of 338.36 g/mol. It is a small-molecule PAC1 receptor antagonist. The compound is soluble in DMSO.
Toxicity/Toxicokinetics
Specific toxicological data for PA-9 are not extensively published. As a PAC1 receptor antagonist, it may have effects on pain pathways and other PACAP-mediated functions. The compound is for research use only.
References

[1]. In Silico Screening Identified Novel Small-molecule Antagonists of PAC1 Receptor. J Pharmacol Exp Ther. 2018 Apr;365(1):1-8.

Additional Infomation
PA-9 is a research tool compound for studying the PAC1 receptor and its role in pain. It is not approved for clinical use. The compound is the first small-molecule PAC1 receptor antagonist and has an IC50 of 5.6 nM. It is also known as a PAC1 receptor antagonist.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C17H18N6O2
Molecular Weight
338.363822460175
Exact Mass
338.149
CAS #
1436004-46-4
PubChem CID
71709695
Appearance
White to light yellow solid powder
LogP
0.4
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
5
Heavy Atom Count
25
Complexity
515
Defined Atom Stereocenter Count
0
SMILES
O=C1CC(C(NCCC2=CN=CN2)=O)CN1C1C2C=CC=CC=2NN=1
InChi Key
WWPHFXOMYQJGGF-UHFFFAOYSA-N
InChi Code
InChI=1S/C17H18N6O2/c24-15-7-11(17(25)19-6-5-12-8-18-10-20-12)9-23(15)16-13-3-1-2-4-14(13)21-22-16/h1-4,8,10-11H,5-7,9H2,(H,18,20)(H,19,25)(H,21,22)
Chemical Name
N-[2-(1H-imidazol-5-yl)ethyl]-1-(1H-indazol-3-yl)-5-oxopyrrolidine-3-carboxamide
Synonyms
PA9; PA 9; PA-9
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~250 mg/mL (~738.86 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.9554 mL 14.7772 mL 29.5543 mL
5 mM 0.5911 mL 2.9554 mL 5.9109 mL
10 mM 0.2955 mL 1.4777 mL 2.9554 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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