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Ophiopogonin D'

Cat No.:V29749 Purity: ≥98%
Ophiopogonin D' is extracted from the tubers of Ophiopogon japonicus and is a rare naturally occurring C29 steroidal glycoside.
Ophiopogonin D'
Ophiopogonin D' Chemical Structure CAS No.: 65604-80-0
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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1mg
5mg
100mg
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Product Description
Ophiopogonin D' is extracted from the tubers of Ophiopogon japonicus and is a rare naturally occurring C29 steroidal glycoside. Ophiopogonin D' has cytotoxic activity against two human tumor cell lines, MG-63 and SNU387, with IC50 of 3.09 μM and 3.63 μM, respectively. Ophiopogonin D' activates SIRT1 in a dose-dependent fashion.
Ophiopogonin D' (CAS 65604-80-0) is a rare naturally occurring C₂₉ steroidal glycoside extracted from the tubers of Ophiopogon japonicus, a traditional Chinese medicinal herb. With a molecular formula of C₄₄H₇₀O₁₆ and a molecular weight of 855.02 g/mol, this compound is a complex steroidal saponin with a highly intricate structure containing 25 defined atom stereocenters. Ophiopogonin D' exhibits potent cytotoxic activity against human tumor cell lines and activates SIRT1 in a dose-dependent fashion. It also noncompetitively inhibits UDP-glucuronosyltransferases UGT1A6 and UGT1A10. The compound is extracted from the tubers of Ophiopogon japonicus, which has been used in traditional Chinese medicine for its cardioprotective and immunomodulatory effects. Ophiopogonin D' is a valuable research tool for studying cancer biology, sirtuin activation, and drug metabolism.
Biological Activity I Assay Protocols (From Reference)
Targets
Ophiopogonin D' targets multiple proteins and enzymes. It activates SIRT1 (sirtuin 1), a NAD⁺-dependent deacetylase involved in cellular stress responses, metabolism, and aging. The compound also noncompetitively inhibits UGT1A6 and UGT1A10, two important UDP-glucuronosyltransferases involved in phase II drug metabolism. As a C₂₉ steroidal glycoside, Ophiopogonin D' interacts with cellular membranes and may modulate various signaling pathways. Its cytotoxic activity against cancer cells is likely mediated through SIRT1 activation and other mechanisms, although the precise molecular targets responsible for its anticancer effects require further elucidation.
ln Vitro
In vitro studies have demonstrated that Ophiopogonin D' exhibits potent cytotoxic activity against two human tumor cell lines: MG-63 (osteosarcoma) and SNU387 (hepatocellular carcinoma), with IC₅₀ values of 3.09 μM and 3.63 μM, respectively. The compound activates SIRT1 in a dose-dependent fashion, suggesting that its biological effects may be mediated through sirtuin activation. Ophiopogonin D' also noncompetitively inhibits UGT1A6 and UGT1A10, indicating potential interactions with drug metabolism pathways. The compound's potent cytotoxicity against cancer cell lines makes it a promising lead compound for anticancer drug development.
ln Vivo
In vivo activity data for Ophiopogonin D' are limited, as the compound is predominantly used in in vitro research settings. Based on its potent in vitro cytotoxicity and SIRT1 activation, the compound may have potential therapeutic applications in cancer and metabolic diseases. However, specific published in vivo studies evaluating the efficacy and pharmacokinetics of Ophiopogonin D' in animal models are not well documented. The compound's complex steroidal glycoside structure may present challenges for oral bioavailability and systemic delivery.
Enzyme Assay
In vitro non-cell enzyme assays for Ophiopogonin D' typically involve measuring SIRT1 activation using fluorometric or luminescent assays. Purified SIRT1 enzyme is incubated with the compound, NAD⁺, and a fluorogenic peptide substrate, and deacetylase activity is measured by fluorescence intensity. UGT inhibition assays are performed using recombinant UGT1A6 and UGT1A10 enzymes incubated with the compound and a fluorogenic substrate (e.g., 4-methylumbelliferone), with product formation measured by fluorescence or HPLC. IC₅₀ values are calculated from dose-response curves.
Cell Assay
In vitro cell-based assays for Ophiopogonin D' use MG-63 osteosarcoma cells and SNU387 hepatocellular carcinoma cells. Cells are cultured in appropriate media and treated with Ophiopogonin D' at varying concentrations for 24-72 hours. Cell viability is assessed using MTT, CCK-8, or SRB assays to determine IC₅₀ values. Apoptosis is evaluated by Annexin V/PI staining and flow cytometry. SIRT1 activation is assessed by measuring acetylation levels of SIRT1 substrates (e.g., p53, FOXO) by Western blotting using acetylation-specific antibodies.
Animal Protocol
In vivo animal studies for Ophiopogonin D' are limited. Standard protocols for evaluating anticancer compounds would involve administration of the compound to tumor-bearing mouse models (xenograft models using MG-63 or SNU387 cells) via intraperitoneal or intravenous injection. Parameters assessed would include tumor volume measurements, survival analysis, histopathological examination of tumors, assessment of SIRT1 activation and apoptosis markers in tumor tissues, and evaluation of systemic toxicity. However, specific published in vivo data for this compound are not well documented.
ADME/Pharmacokinetics
Ophiopogonin D' has a molecular weight of 855.02 g/mol and a molecular formula of C₄₄H₇₀O₁₆. It has a high LogP of 6.69, indicating significant lipophilicity. The compound should be stored at -20°C. It is soluble in organic solvents such as DMSO. Due to its high molecular weight and complex glycosidic structure, Ophiopogonin D' is expected to have poor oral bioavailability. The compound's pharmacokinetic properties, including absorption, distribution, metabolism, and excretion, have not been extensively characterized.
Toxicity/Toxicokinetics
The toxicity profile of Ophiopogonin D' has not been comprehensively evaluated in published studies. As a natural component of Ophiopogon japonicus, which has a long history of use in traditional Chinese medicine, it is generally considered to have low toxicity at therapeutic doses. However, the compound's potent cytotoxicity against cancer cells suggests that it may have significant biological activity that requires careful evaluation. The compound is classified as a research reagent and is not intended for human therapeutic use. Comprehensive toxicological studies have not been reported.
References

[1]. Homo-aro-cholestane, furostane and spirostane saponins from the tubers of Ophiopogonjaponicus. Phytochemistry. 2017 Apr;136:125-132.

[2]. Specific Turn-On Fluorescent Probe with Aggregation-Induced EmissionCharacteristics for SIRT1 Modulator Screening and Living-Cell Imaging. Anal Chem. 2015;87(10):5046-9.

Additional Infomation
See also: Ophiopogonin D (note moved to).
Ophiopogonin D' is a rare naturally occurring C₂₉ steroidal glycoside extracted from the tubers of Ophiopogon japonicus. It is also known as Diosgenin 3-O-[α-L-rhamnopyranosyl-(1-2)][β-D-xylopyranosyl-(1-3)]-β-D-glucopyranoside. The compound activates SIRT1 in a dose-dependent fashion and noncompetitively inhibits UGT1A6 and UGT1A10. It exhibits potent cytotoxic activity against MG-63 osteosarcoma and SNU387 hepatocellular carcinoma cells. Not approved for clinical use; intended for research purposes only.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C44H70O16
Molecular Weight
855.0170
Exact Mass
854.466
CAS #
65604-80-0
PubChem CID
10033524
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Index of Refraction
1.618
LogP
6.69
Hydrogen Bond Donor Count
8
Hydrogen Bond Acceptor Count
16
Rotatable Bond Count
7
Heavy Atom Count
60
Complexity
1570
Defined Atom Stereocenter Count
25
SMILES
C[C@@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC=C6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O[C@H]9[C@@H]([C@@H]([C@H]([C@@H](O9)C)O)O)O)C)C)C)OC1
InChi Key
DQYACEDUQHWXQZ-QOYNBSPSSA-N
InChi Code
InChI=1S/C44H70O16/c1-19-8-13-44(54-17-19)20(2)30-28(60-44)15-26-24-7-6-22-14-23(9-11-42(22,4)25(24)10-12-43(26,30)5)56-41-38(59-40-36(52)34(50)31(47)21(3)55-40)37(33(49)29(16-45)57-41)58-39-35(51)32(48)27(46)18-53-39/h6,19-21,23-41,45-52H,7-18H2,1-5H3/t19-,20+,21+,23+,24-,25+,26+,27-,28+,29-,30+,31+,32+,33-,34-,35-,36-,37+,38-,39+,40+,41-,42+,43+,44-/m1/s1
Chemical Name
(2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-2-[(1S,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: This product requires protection from light (avoid light exposure) during transportation and storage.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.1696 mL 5.8478 mL 11.6956 mL
5 mM 0.2339 mL 1.1696 mL 2.3391 mL
10 mM 0.1170 mL 0.5848 mL 1.1696 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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