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Ofloxacin-d3

Cat No.:V45733 Purity: ≥98%
Ofloxacin-d3 is the deuterium labelled form of Ofloxacin.
Ofloxacin-d3
Ofloxacin-d3 Chemical Structure CAS No.: 1173147-91-5
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
100mg
Other Sizes

Other Forms of Ofloxacin-d3:

  • Ofloxacin (Hoe-280; DL8280)
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
Ofloxacin-d3 is the deuterium labelled form of Ofloxacin.
Ofloxacin-d3 is a deuterium-labeled analog of the fluoroquinolone antibiotic Ofloxacin, in which three hydrogen atoms are replaced with deuterium. It is a stable isotope-labeled compound with the molecular formula C₁₈H₁₇D₃FN₃O₄ and molecular weight 364.39. Ofloxacin-d3 is used primarily as an internal standard for the quantification of Ofloxacin in biological samples using mass spectrometry-based analytical methods. It retains the antibacterial activity of Ofloxacin against most Gram-negative bacteria, many Gram-positive bacteria, and some anaerobic bacteria.
Biological Activity I Assay Protocols (From Reference)
Targets
Ofloxacin-d3 targets bacterial DNA gyrase (topoisomerase II) and topoisomerase IV, which are essential enzymes for bacterial DNA replication, transcription, and repair. As a deuterated analog of Ofloxacin, it retains the same mechanism of action as the parent compound. It inhibits these enzymes by stabilizing the DNA-enzyme cleavage complex, leading to bacterial cell death. The deuterium substitution does not alter the primary pharmacological target but serves as a tracer for analytical purposes.
ln Vitro
In the process of developing new drugs, stable heavy isotopes of carbon, hydrogen, and other elements have been added to pharmacological molecules, mostly as quantitative tracers. Due to its potential effects on medication pharmacokinetics and metabolic properties, deuteration is a matter for worry [75].
Ofloxacin-d3 exhibits antibacterial activity against most Gram-negative bacteria, many Gram-positive bacteria, and some anaerobic bacteria, consistent with the activity profile of the parent compound Ofloxacin. Its in vitro activity is typically evaluated using standard antimicrobial susceptibility testing methods such as broth microdilution or disk diffusion assays against a panel of reference bacterial strains. The minimum inhibitory concentrations (MICs) are determined to assess antibacterial potency.
ln Vivo
In vivo activity of Ofloxacin-d3 is not typically studied as a therapeutic entity, as its primary use is as an analytical internal standard. However, as a deuterated analog of Ofloxacin, it would be expected to exhibit similar in vivo antibacterial efficacy to the parent compound. Ofloxacin is known to be effective in treating various bacterial infections in vivo, including respiratory, urinary tract, and skin infections.
Enzyme Assay
The non-cellular enzyme/receptor binding assay for Ofloxacin-d3 is not typically performed, as its primary use is as an analytical internal standard rather than as a pharmacological tool. However, if studying its mechanism, assays would involve bacterial DNA gyrase supercoiling or relaxation assays. The compound's ability to inhibit DNA gyrase-mediated DNA supercoiling would be measured using plasmid DNA as substrate and purified enzyme.
Cell Assay
In vitro cellular assays for Ofloxacin-d3 are not typically conducted for pharmacological evaluation. Instead, the compound is used as an internal standard in LC-MS/MS methods for quantifying Ofloxacin concentrations in biological matrices such as plasma, urine, and tissue homogenates. Sample preparation involves protein precipitation or solid-phase extraction, followed by chromatographic separation and mass spectrometric detection using selected reaction monitoring (SRM) transitions specific to the deuterated compound.
Animal Protocol
In vivo animal studies for Ofloxacin-d3 are not conducted for pharmacological evaluation. Instead, the compound is administered to animals as part of pharmacokinetic studies to track the disposition of Ofloxacin using the deuterated analog as an internal standard. Animals are dosed with Ofloxacin, and blood or tissue samples are collected at various time points. Ofloxacin-d3 is added to samples before analysis to correct for matrix effects and extraction efficiency in LC-MS/MS quantification.
ADME/Pharmacokinetics
Pharmacokinetic properties of Ofloxacin-d3 are expected to be nearly identical to those of the parent compound Ofloxacin due to the minor isotopic substitution. Ofloxacin is well absorbed orally with bioavailability of approximately 90-95%. It is widely distributed in body tissues and fluids, with a plasma protein binding of about 20-25%. The elimination half-life is approximately 6-8 hours in humans. The compound is primarily excreted unchanged in urine.
Toxicity/Toxicokinetics
The deuterium-labeled Ofloxacin-d3 is stable and non-toxic at the trace concentrations used as an internal standard. The parent compound Ofloxacin is generally well-tolerated, with common adverse effects including nausea, diarrhea, headache, and dizziness. Serious but rare adverse effects include tendon rupture and peripheral neuropathy. Ofloxacin-d3 itself is not administered at therapeutic doses for toxicity evaluation, as its use is limited to analytical applications.
References

[1]. Impact of Deuterium Substitution on the Pharmacokinetics of Pharmaceuticals. Ann Pharmacother. 2019;53(2):211-223.

Additional Infomation
Ofloxacin-d3 is a research-grade stable isotope-labeled compound intended for laboratory use as an analytical internal standard. It is not approved for clinical use as a therapeutic agent. Its primary application is in bioanalytical method development for the quantification of Ofloxacin in pharmacokinetic, bioavailability, and bioequivalence studies. The compound is also known as Ofloxacin D3 and has CAS number 1173147-91-5.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C18H20N3O4F
Molecular Weight
361.3675
Exact Mass
364.163
CAS #
1173147-91-5
Related CAS #
Ofloxacin;82419-36-1
PubChem CID
71312303
Appearance
White to off-white solid powder
LogP
1.546
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
2
Heavy Atom Count
26
Complexity
634
Defined Atom Stereocenter Count
0
SMILES
[2H]C([2H])([2H])N1CCN(CC1)C2=C(C=C3C4=C2OCC(N4C=C(C3=O)C(=O)O)C)F
InChi Key
GSDSWSVVBLHKDQ-BMSJAHLVSA-N
InChi Code
InChI=1S/C18H20FN3O4/c1-10-9-26-17-14-11(16(23)12(18(24)25)8-22(10)14)7-13(19)15(17)21-5-3-20(2)4-6-21/h7-8,10H,3-6,9H2,1-2H3,(H,24,25)/i2D3
Chemical Name
7-fluoro-2-methyl-10-oxo-6-[4-(trideuteriomethyl)piperazin-1-yl]-4-oxa-1-azatricyclo[7.3.1.05,13]trideca-5(13),6,8,11-tetraene-11-carboxylic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.7672 mL 13.8362 mL 27.6725 mL
5 mM 0.5534 mL 2.7672 mL 5.5345 mL
10 mM 0.2767 mL 1.3836 mL 2.7672 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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