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OD36

Alias: OD 36; OD-36; OD36
Cat No.:V26838 Purity: ≥98%
OD36 is a RIPK2 inhibitor (antagonist) with IC50 of 5.3 nM.
OD36
OD36 Chemical Structure CAS No.: 1638644-62-8
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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5mg
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Other Forms of OD36:

  • OD-36 HCl
Official Supplier of:
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Top Publications Citing lnvivochem Products
Product Description
OD36 is a RIPK2 inhibitor (antagonist) with IC50 of 5.3 nM. OD36 is a macrocyclic inhibitor that binds efficiently to the ALK2 kinase ATP pocket. OD36 targets ALK2 with Kd of 37 nM.
OD36 (CAS#: 1638644-62-8) is a potent, specific, ATP-competitive inhibitor of RIPK2 (receptor-interacting protein kinase 2) with an IC50 of 5.3 nM. It is a macrocyclic inhibitor that binds efficiently to the ALK2 kinase ATP pocket with a Kd of 37 nM. OD36 inhibits Tyr and Ser/Thr-directed activities of RIPK2 and downregulates MAPK signaling induced by MDP.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary targets of OD36 are RIPK2 and ALK2. It acts as a potent inhibitor of RIPK2 with an IC50 of 5.3 nM. It also binds efficiently to the ALK2 kinase ATP pocket with a Kd of 37 nM. By inhibiting RIPK2, it downregulates MAPK signaling induced by MDP and decreases cellular infiltration induced by MDP in neutrophils and lymphocytes.
ln Vitro
ALK2 and ALK2 R206H are also inhibited by OD36, with IC50 values of 47 and 22 nM, respectively[1]. With a KD of 90 nM, OD36 has action against ALK1 [2]. Osteogenic differentiation and mutant ALK2 signaling are successfully inhibited by OD36 [2]. In KS483 cells, OD36 (0.1–1 μM; 24 hours) efficiently suppresses BMP-6 (50 ng/mL)-induced p-Smad1/5 [2]. Endothelial colony-forming cells (ECFC) of fibrodysplasia ossificans progressive (FOP) fully inhibit the activation of Smad1/5 and the gene targets ID-1 and ID-3 in response to activin A when preincubated with OD36 (0.5 μM) [2].
In vitro, OD36 inhibits RIPK2 with an IC50 of 5.3 nM. It is a macrocyclic inhibitor with potent binding to the ALK2 kinase ATP pocket, with a Kd of 37 nM. It inhibits Tyr and Ser/Thr-directed activities of RIPK2 and downregulates MAPK signaling induced by MDP. Its activity is typically measured using kinase assays with purified enzymes.
ln Vivo
In a mouse model of acute peritonitis, OD36 (6.25 mg/kg; intraperitoneal injection; once) decreases inflammation [3].
In vivo, OD36 decreases cellular infiltration induced by MDP in neutrophils and lymphocytes. This suggests that the compound has anti-inflammatory effects in vivo. Its ability to inhibit RIPK2 and downregulate MAPK signaling contributes to its anti-inflammatory activity.
Enzyme Assay
In vitro enzyme/receptor binding assays for OD36 involve kinase activity assays using purified RIPK2 or ALK2 enzymes. The compound's inhibitory activity is measured by monitoring the phosphorylation of a substrate peptide or protein in the presence of ATP. IC50 and Kd values are determined from dose-response curves and binding studies.
Cell Assay
Western Blot Analysis[2]
Cell Types: KS483 Cell
Tested Concentrations: 0.1, 0.2 and 1 μM
Incubation Duration:
Experimental Results: Inhibition of BMP-6-induced p-Smad1/5.
In vitro cellular assays for OD36 are conducted in cells that express RIPK2 or respond to MDP stimulation. Cells are treated with the compound, and MAPK signaling is assessed by measuring phosphorylation of downstream targets such as ERK, JNK, or p38 using western blotting. Its effects on MDP-induced cytokine production can also be measured.
Animal Protocol
Animal/Disease Models: C57BL/6 mice, muramyl dipeptide (MDP)-induced peritonitis model [3]
Doses: 6.25 mg/kg
Route of Administration: intraperitoneal (ip) injection, 30 minutes before MDP
Experimental Results: Inhibited the influx of inflammatory cells into the peritoneum Recruits, particularly neutrophils, and to a lesser extent lymphocytes. Expression of RIPK2-specific genes as well as inflammatory cytokine and chemokine genes was diminished.
In vivo animal studies for OD36 are conducted in animal models of inflammation, such as MDP-induced peritonitis. Animals are administered the compound orally or intraperitoneally, and cellular infiltration into the peritoneal cavity is assessed by counting neutrophils and lymphocytes. Its effects on inflammatory cytokine levels are measured.
ADME/Pharmacokinetics
Pharmacokinetic properties of OD36 indicate it has a molecular weight of 337.78 and a molecular formula of C16H15ClN4O2. It is a macrocyclic compound. Its bioavailability and other PK parameters would be determined in preclinical studies for its use as a research tool. The compound is typically stored as a powder at appropriate conditions.
Toxicity/Toxicokinetics
Toxicological information for OD36 is limited to its use as a research chemical. As a kinase inhibitor, it may have effects on cell signaling and inflammation. Comprehensive toxicology studies would be required for its use in vivo, including assessments of its effects on immune function and organ toxicity.
References

[1]. In vivo inhibition of RIPK2 kinase alleviates inflammatory disease. J Biol Chem. 2014 Oct 24;289(43):29651-64.

[2]. Development of Macrocycle Kinase Inhibitors for ALK2 Using Fibrodysplasia Ossificans Progressiva-Derived Endothelial Cells. JBMR Plus. 2019 Oct 7;3(11):e10230.

[3]. In vivo inhibition of RIPK2 kinase alleviates inflammatory disease. J Biol Chem. 2014 Oct 24;289(43):29651-64.

Additional Infomation
OD36 is a research compound used as a potent and specific inhibitor of RIPK2. It is also a macrocyclic inhibitor that binds to ALK2. It is used to study RIPK2-mediated signaling and inflammation. It is available from research chemical suppliers for preclinical studies. It is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C16H15CLN4O2
Molecular Weight
330.772
Exact Mass
366.065
Elemental Analysis
C, 58.10; H, 4.57; Cl, 10.72; N, 16.94; O, 9.67
CAS #
1638644-62-8
Related CAS #
OD36 hydrochloride;2387510-88-3
PubChem CID
135567262
Appearance
White to off-white solid powder
LogP
2.5
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
0
Heavy Atom Count
23
Complexity
402
Defined Atom Stereocenter Count
0
SMILES
ClC1=CC2=CC(=C1)C1C=NN3C=CC(=NC3=1)NCCOCCO2
InChi Key
KTSDBMVHAKWDRK-UHFFFAOYSA-N
InChi Code
InChI=1S/C16H15ClN4O2/c17-12-7-11-8-13(9-12)23-6-5-22-4-2-18-15-1-3-21-16(20-15)14(11)10-19-21/h1,3,7-10H,2,4-6H2,(H,18,20)
Chemical Name
4-chloro-7,10-dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.12,6.017,20]docosa-1(20),2(22),3,5,14(21),15,18-heptaene
Synonyms
OD 36; OD-36; OD36
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~33.33 mg/mL (~100.76 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 3.0232 mL 15.1162 mL 30.2325 mL
5 mM 0.6046 mL 3.0232 mL 6.0465 mL
10 mM 0.3023 mL 1.5116 mL 3.0232 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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