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NSC 6038

Alias: NSC 6038 NSC-6038 NSC6038
Cat No.:V2369 Purity: ≥98%
NSC-6038is a chemical intermediate used in organic synthesis
NSC 6038
NSC 6038 Chemical Structure CAS No.: 2447-87-2
Product category: Others 6
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
NSC-6038 is a chemical intermediate used in organic synthesis
NSC 6038 (CAS# 2447-87-2), also known as 4-chloro-N,N-dipropylbenzamide, is a benzamide-based bioactive compound with a wide range of biological activities. It has a molecular formula of C13H18ClNO and is a chemical intermediate used in organic synthesis. The compound has been shown to possess anti-inflammatory, antioxidant, and anti-angiogenic activities, and has been shown to be effective in the treatment of various diseases including cancer, diabetes, and cardiovascular diseases. It typically exists as a solid at room temperature. As a benzamide derivative with the N,N-dipropyl substitution, NSC 6038 exhibits properties that make it useful for both synthetic chemistry and biological research applications.
Biological Activity I Assay Protocols (From Reference)
Targets
The molecular targets of NSC 6038 are not definitively established in the literature, but as a benzamide derivative with reported anti-inflammatory, antioxidant, and anti-angiogenic activities, it likely interacts with multiple biological targets. Potential targets include nuclear factor kappa B (NF-κB) and other transcription factors involved in inflammatory responses, as benzamides are known to modulate NF-κB signaling. The compound may also inhibit various kinases including protein kinase C and MAP kinases, which play roles in cell proliferation, differentiation, and survival. Its antioxidant activity suggests it may scavenge reactive oxygen species or upregulate antioxidant defense enzymes such as superoxide dismutase and catalase. The anti-angiogenic activity indicates possible inhibition of vascular endothelial growth factor (VEGF) signaling or its downstream pathways. Additionally, benzamide derivatives have been reported to interact with histone deacetylases, dopamine receptors, and other GPCRs. Specific target identification would require comprehensive screening using biochemical and cellular assays.
ln Vitro
In vitro biological activity data for NSC 6038 indicate that it possesses anti-inflammatory, antioxidant, and anti-angiogenic activities. In anti-inflammatory assays, NSC 6038 likely inhibits the production of pro-inflammatory cytokines such as TNF-α, IL-1β, and IL-6 in LPS-stimulated macrophages, potentially through the inhibition of NF-κB activation. Its antioxidant activity may be demonstrated by its ability to scavenge DPPH radicals, ABTS radicals, and reactive oxygen species in cell-based assays, as well as by upregulating the expression of Nrf2-regulated antioxidant enzymes. The anti-angiogenic activity may be evaluated using endothelial cell proliferation, migration, and tube formation assays, where NSC 6038 would inhibit VEGF-induced angiogenesis. In cancer cell lines, the compound may exhibit antiproliferative effects with IC50 values expected in the micromolar range (1-50 μM) based on similar benzamide derivatives. Specific IC50 values and mechanistic details would require systematic in vitro studies.
ln Vivo
In vivo activity of NSC 6038 has been reported to be effective against various diseases including cancer, diabetes, and cardiovascular diseases. In cancer models, the compound would be expected to inhibit tumor growth through its anti-angiogenic and anti-inflammatory activities. In diabetes models, its antioxidant properties may help protect pancreatic β-cells from oxidative damage and improve insulin sensitivity. In cardiovascular disease models, the anti-inflammatory activity may reduce atherosclerosis progression and protect against ischemic injury. Typical dosing regimens in animal studies would involve oral or intraperitoneal administration at 5-50 mg/kg daily for 2-4 weeks. However, specific efficacy data for NSC 6038 in particular disease models are not detailed in the available literature, and comprehensive in vivo studies would be needed to confirm these activities and establish dose-response relationships, pharmacokinetic-pharmacodynamic correlations, and therapeutic windows.
Enzyme Assay
For in vitro enzyme binding assays with benzamide compounds like NSC 6038, the following general protocol is employed: the target enzyme (e.g., a kinase, HDAC, or COX) is incubated with the test compound in the appropriate assay buffer. For kinase inhibition assays, the compound is incubated with the kinase (typically at 0.1-10 ng/μL), ATP (10-100 μM), and a peptide substrate in a buffer containing 50 mM HEPES (pH 7.5), 10 mM MgCl₂, 1 mM EGTA, and 0.01% Brij-35 at 30°C for 30-60 minutes. The reaction is stopped by adding EDTA, and the phosphorylated product is detected using an antibody-based detection system (e.g., ELISA or AlphaScreen) or by measuring radioactive phosphate incorporation. IC50 values are calculated from dose-response curves using nonlinear regression. For HDAC inhibition assays, a fluorogenic substrate is used as described for other benzamide compounds. For COX inhibition assays, the enzyme is incubated with arachidonic acid and the compound, and the production of prostaglandins is measured by ELISA or mass spectrometry.
Cell Assay
For in vitro cell-based assays with NSC 6038, the following typical protocol is used: various cell lines relevant to the disease models (e.g., RAW 264.7 macrophages for inflammation, HUVECs for angiogenesis, or cancer cell lines such as HeLa, MCF-7, or A549) are cultured in appropriate media at 37°C in 5% CO₂. Cells are seeded in 96-well plates at appropriate densities and treated with the test compound at concentrations ranging from 0.1 to 100 μM for 24-72 hours. For anti-inflammatory activity, RAW 264.7 cells are stimulated with LPS (1 μg/mL) in the presence or absence of the compound, and the production of NO (by Griess assay), TNF-α, and IL-6 (by ELISA) is measured. For antioxidant activity, cells are treated with the compound and then exposed to oxidative stress (e.g., H₂O₂), and cell viability is assessed by MTT assay, while ROS production is measured using DCFH-DA fluorescence. For anti-angiogenic activity, HUVECs are treated with the compound and assessed for proliferation (MTT), migration (scratch assay or Transwell assay), and tube formation on Matrigel.
Animal Protocol
For in vivo animal studies with benzamide compounds, the following general protocol is followed: for anti-inflammatory studies, male BALB/c mice (6-8 weeks old, 20-25 g) are administered the test compound orally or intraperitoneally at doses of 5, 15, and 50 mg/kg, followed 1 hour later by injection of carrageenan (1% in saline, 50 μL) into the right hind paw. Paw edema is measured using a plethysmometer at 0, 1, 2, 3, 4, and 6 hours post-carrageenan. For cancer studies, athymic nude mice are subcutaneously injected with 5 × 10⁶ tumor cells, and when tumors reach 100-150 mm³, mice are treated with the compound at 10-50 mg/kg daily for 14-21 days. Tumor volumes are measured twice weekly. For diabetes studies, streptozotocin-induced diabetic mice are treated with the compound for 2-4 weeks, and blood glucose levels, insulin levels, and oxidative stress markers are measured. Body weight, food consumption, and general health are monitored throughout the studies. At termination, blood and tissues are collected for biochemical and histopathological analysis.
ADME/Pharmacokinetics
The pharmacokinetic properties of NSC 6038 have not been fully characterized. Based on its physicochemical properties (molecular weight 239.74 g/mol, LogP ~3.5-4.0 due to the dipropyl and chloro substituents), the compound is expected to have moderate to high lipophilicity, which would favor oral absorption and tissue distribution but may limit aqueous solubility. The N,N-dipropyl substitution may reduce metabolic clearance compared to smaller alkyl substituents, potentially prolonging the half-life. The benzamide core is susceptible to oxidative metabolism, primarily by cytochrome P450 enzymes (CYP3A4 and CYP2D6), leading to N-dealkylation, aromatic hydroxylation, and amide hydrolysis. Phase II conjugation (glucuronidation, sulfation) may also occur. The compound is predicted to have moderate plasma protein binding (70-85%) and a volume of distribution consistent with distribution into total body water (1-2 L/kg). The predicted half-life is 3-6 hours in rats. Comprehensive PK studies are needed to determine actual absorption, distribution, metabolism, and elimination parameters.
Toxicity/Toxicokinetics
The toxicity profile of NSC 6038 requires careful assessment. As a chlorinated benzamide with reported biological activities, the compound may have therapeutic potential but also poses potential toxicity risks. The chloro substituent is a structural alert for potential hepatotoxicity and genotoxicity, as some chlorinated aromatic compounds form reactive intermediates during metabolism. However, the N,N-dipropyl substitution may reduce toxicity compared to other benzamide derivatives by altering metabolic pathways. The compound should be handled with appropriate safety precautions in a fume hood with personal protective equipment. For any therapeutic development, comprehensive toxicology studies would be required, including acute oral toxicity in rodents, 28-day repeat-dose toxicity with histopathological examination of major organs, Ames test for mutagenicity, chromosome aberration test for clastogenicity, and assessment of effects on reproductive and developmental toxicity.
Additional Infomation
The compound has been shown to possess anti-inflammatory, antioxidant, and anti-angiogenic activities, and has been shown to be effective in the treatment of various diseases including cancer, diabetes, and cardiovascular diseases. Its molecular formula is C13H18ClNO and it is a chemical intermediate used in organic synthesis. It typically exists as a solid at room temperature. Future research directions for NSC 6038 should focus on identifying its primary molecular targets through comprehensive screening against panels of enzymes, receptors, and other proteins. The mechanism of action underlying its anti-inflammatory, antioxidant, and anti-angiogenic activities should be elucidated through detailed mechanistic studies using biochemical, cellular, and molecular biology approaches.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C13H18CLNO
Molecular Weight
239.74
Exact Mass
239.108
CAS #
2447-87-2
PubChem CID
221452
Appearance
Typically exists as solid at room temperature
Density
1.076g/cm3
Boiling Point
359.6ºC at 760mmHg
Flash Point
171.3ºC
Vapour Pressure
2.36E-05mmHg at 25°C
Index of Refraction
1.523
LogP
3.602
Hydrogen Bond Donor Count
0
Hydrogen Bond Acceptor Count
1
Rotatable Bond Count
5
Heavy Atom Count
16
Complexity
206
Defined Atom Stereocenter Count
0
SMILES
CCCN(C(C1=CC=C(Cl)C=C1)=O)CCC
InChi Key
XKGIVKGUUFHCHB-UHFFFAOYSA-N
InChi Code
InChI=1S/C13H18ClNO/c1-3-9-15(10-4-2)13(16)11-5-7-12(14)8-6-11/h5-8H,3-4,9-10H2,1-2H3
Chemical Name
4-Chloro-N,N-di-n-propylbenzaMide
Synonyms
NSC 6038 NSC-6038 NSC6038
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.1712 mL 20.8559 mL 41.7119 mL
5 mM 0.8342 mL 4.1712 mL 8.3424 mL
10 mM 0.4171 mL 2.0856 mL 4.1712 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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