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Notoptol

Cat No.:V41509 Purity: ≥98%
Notoptol can be extracted from the fruit of Peucedanum alsaticum L.
Notoptol
Notoptol Chemical Structure CAS No.: 88206-49-9
Product category: New3
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
Other Sizes
Official Supplier of:
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Product Description
Notoptol can be extracted from the fruit of Peucedanum alsaticum L.
Notoptol is a natural product originally isolated from plants of the Notopterygium genus (Apiaceae family) and also found in species like Hansenia forbesii and Peucedanum alsaticum. It is a coumarin-based compound used primarily as a reference standard for the identification and quantification of its parent compound in herbal extracts and biological samples via HPLC or LC-MS methods.
Biological Activity I Assay Protocols (From Reference)
Targets
The specific molecular targets of Notoptol have not been extensively characterized in the published literature. As a coumarin derivative, it may possess intrinsic biological properties, including potential anti-inflammatory, antioxidant, or antimicrobial activities, which are common to many natural coumarins. However, the primary use of this compound is as a reference standard for analytical chemistry and natural product research, rather than as a tool for studying a specific pharmacological target.
ln Vitro
There are no published cell-free biochemical assays that use Notoptol as an inhibitor or activator, as its primary research role is as a reference standard. However, if one were to perform a standard coumarin-based assay, it might involve testing its antioxidant capacity via DPPH radical scavenging or its ability to inhibit lipoxygenase. Its chemical structure (C21H22O5) includes a lactone ring characteristic of coumarins, which is known to interact with various enzymes in a structure-dependent manner, but specific data for Notoptol is lacking.
ln Vivo
Notoptol is typically not used in cell-based assays for drug discovery, as it is a reference standard. However, if investigated, coumarin derivatives can show cytotoxicity against cancer cell lines or effects on inflammatory cytokine production in immune cells. For Notoptol specifically, no such cellular IC50 or EC50 values have been reported in the primary scientific literature. Its use is confined to the analysis and quantification of Notopterygium-derived compounds in various matrices.
Enzyme Assay
As a reference standard, Notoptol is not used in typical cell-free activity assays. Instead, it is used for method development and validation. A standard solution of Notoptol is prepared at a known concentration (e.g., 1 mg/mL in methanol or DMSO). This solution is then diluted to make a calibration curve (e.g., 0.5-100 ug/mL). The UV absorbance of the standard is measured using a UV-Vis spectrophotometer to determine its molar absorptivity. Alternatively, in an HPLC-UV or LC-MS method, the standard is injected, and the retention time and peak area are determined. This information is then used to identify and quantify Notoptol in a sample containing a complex plant extract. The compound is not used for receptor binding or enzyme inhibition studies.
Cell Assay
Notoptol is not intended for use in cell culture experiments, as its primary role is analytical. If used in a biological study, it would be dissolved in DMSO (at concentrations <0.1% final DMSO) and added to cells such as macrophages or cancer cell lines. The cells might be incubated for 24-72 hours, and endpoints such as cell viability (MTT assay), nitric oxide production (Griess assay), or inflammatory cytokine secretion (ELISA) would be measured. However, no published data on the cellular activity of Notoptol are available. For analytical purposes, the cell model is not applicable.
Animal Protocol
Notoptol is not used in animal studies for evaluating pharmacological activity. As a reference standard, it is used in the preparation of quality control samples for pharmacokinetic (PK) studies of natural products. For example, an animal may be dosed with an extract of Notopterygium, and blood or tissue samples are collected. A calibration curve prepared using Notoptol as an external or internal standard is then used to quantify the concentration of its parent compound or related metabolites in these biological samples by LC-MS/MS. The compound itself is not administered to animals as a test substance.
ADME/Pharmacokinetics
Notoptol is not a drug, and its pharmacokinetic properties have not been studied. As a reference standard, it is important that it is stable and pure. The compound is typically stored as a powder at -20degC and is stable for at least 3 years. It is soluble in organic solvents such as methanol, ethanol, acetonitrile, and DMSO, but it has limited solubility in water. For LC-MS/MS analysis, its retention time, fragmentation pattern, and ionization efficiency (in ESI+ mode) would be documented. Its molecular weight is 354.4 g/mol. The hydrogen-deuterium exchange mass spectrometry (HDX-MS) can be used to study its structure, but it is not a compound used for PK studies in vivo.
Toxicity/Toxicokinetics
Notoptol is a natural product and is generally regarded as a research chemical with low toxicity, as it is not intended for in vivo use. The toxicological profile has not been formally assessed. Based on its structural class, it may be an irritant. Standard laboratory safety practices should be followed: avoid inhalation, ingestion, and skin contact. It is not intended for human or veterinary use and is provided for research use only. For disposal, follow institutional guidelines for the disposal of chemical waste.
References

[1]. Isolation of the minor and rare constituents from fruits of Peucedanum alsaticum L. using high-performance counter-current chromatography. J Sep Sci. 2012 Apr;35(7):790-7.

Additional Infomation
Reports indicate that Notoptol has been found in Hansenia forbesii, Hansenia weberbaueriana, and Tetradium daniellii, and relevant data are available for reference.
Notoptol (CAS 88206-49-9) is a coumarin compound used as a natural product reference standard. It is a phytochemical marker for the genus Notopterygium and related species. In traditional Chinese medicine (TCM), plants of the Notopterygium genus are used as anti-inflammatory and analgesic agents. Notoptol is one of the chemical constituents that may contribute to these effects, though its own bioactivity is not well-defined. The compound is used for the standardization of herbal extracts in quality control (QC) laboratories. It is sold as a neat solid with a purity of >98% by HPLC. For research use, it can be used to study the metabolism of coumarins or as a positive control in HPLC analysis. The molecular weight is 354.4.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H22O5
Molecular Weight
354.39638
Exact Mass
354.147
CAS #
88206-49-9
PubChem CID
5320228
Appearance
Typically exists as solid at room temperature
LogP
4.581
Hydrogen Bond Donor Count
1
Hydrogen Bond Acceptor Count
5
Rotatable Bond Count
6
Heavy Atom Count
26
Complexity
604
Defined Atom Stereocenter Count
0
SMILES
O(C1C2C=COC=2C=C2OC(C=CC=12)=O)C/C=C(\C)/C/C=C/C(O)(C)C
InChi Key
WIEGIEBFVOUTDV-OVXNXNIRSA-N
InChi Code
InChI=1S/C21H22O5/c1-14(5-4-10-21(2,3)23)8-11-25-20-15-6-7-19(22)26-18(15)13-17-16(20)9-12-24-17/h4,6-10,12-13,23H,5,11H2,1-3H3/b10-4+,14-8+
Chemical Name
4-[(2E,5E)-7-hydroxy-3,7-dimethylocta-2,5-dienoxy]furo[3,2-g]chromen-7-one
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.8217 mL 14.1084 mL 28.2167 mL
5 mM 0.5643 mL 2.8217 mL 5.6433 mL
10 mM 0.2822 mL 1.4108 mL 2.8217 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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