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NB-360 free base

Alias: NB360 NB 360 NB-360
Cat No.:V26262 Purity: ≥98%
NB-360 (NB360) is a novel, potent, orally bioavailable and brain penetrant inhibitor of beta-secretase BACE1/BACE2 withanti-AD (Alzheimers disease) activity.
NB-360 free base
NB-360 free base Chemical Structure CAS No.: 1262857-73-7
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
NB-360 (NB360) is a novel, potent, orally bioavailable and brain penetrant inhibitor of beta-secretase BACE1/BACE2 with anti-AD (Alzheimer's disease) activity. It inhibits BACE1/2 with IC50 of 5 nM and 6 nM, respectively.
NB-360 free base (CAS#: 1262857-73-7) is a potent, selective, and brain-penetrant inhibitor of the aspartic protease BACE1 (beta-secretase 1). BACE1 is a key enzyme in the production of amyloid-β peptides from amyloid precursor protein (APP). NB-360 is used in Alzheimer's disease research to study the role of BACE1 in amyloid pathology and cognitive decline. The compound shows excellent selectivity for BACE1 over other aspartic proteases.
Biological Activity I Assay Protocols (From Reference)
Targets
NB-360 targets BACE1 (beta-secretase 1), a membrane-bound aspartic protease that cleaves amyloid precursor protein (APP) at the beta-site to generate amyloid-β peptides. By inhibiting BACE1, NB-360 reduces the production of amyloid-β peptides, which are the primary components of amyloid plaques in Alzheimer's disease. The compound is brain-penetrant, enabling central nervous system target engagement. NB-360 shows selectivity for BACE1 over other aspartic proteases.
ln Vitro
In vitro, NB-360 potently inhibits BACE1 enzymatic activity. It shows excellent selectivity for BACE1 over other aspartic proteases. The compound reduces amyloid-β production in cell-based assays. Its brain penetration enables target engagement in CNS models. Detailed in vitro data are available in the primary literature. NB-360 is a valuable tool for studying BACE1 function in Alzheimer's disease.
ln Vivo
In vivo, NB-360 has been evaluated in animal models of Alzheimer's disease. The compound reduces amyloid-β levels in the brain and cerebrospinal fluid. It is brain-penetrant and shows efficacy in reducing amyloid pathology. NB-360 has been studied in transgenic mouse models of Alzheimer's disease. Further studies are needed to fully characterize its efficacy and safety profile.
Enzyme Assay
In vitro BACE1 activity assays for NB-360 typically use recombinant BACE1 enzyme and a fluorogenic peptide substrate (e.g., APP beta-secretase cleavage site peptide). The compound is dissolved in DMSO and diluted in assay buffer (50 mM sodium acetate, pH 4.5, 0.1% CHAPS). Reactions are incubated at 37°C for 30-60 minutes. Fluorescence is measured at appropriate wavelengths. IC₅₀ values are calculated from dose-response curves. Selectivity is assessed against other aspartic proteases (e.g., cathepsin D, renin). Controls include DMSO vehicle and known BACE1 inhibitors.
Cell Assay
For cell-based assays, cells expressing APP (e.g., CHO-APP or SH-SY5Y-APP) are cultured in appropriate medium. Cells are seeded in multi-well plates and treated with NB-360 at various concentrations (0.001-10 μM) for 24-48 hours. Amyloid-β levels in conditioned media are measured by ELISA or MSD assays. Cell viability is assessed by MTT or CellTiter-Glo. All treatments include vehicle controls and are performed in triplicate.
Animal Protocol
In vivo, NB-360 is typically administered orally to rodents. For Alzheimer's disease models, transgenic mice (e.g., APP/PS1) are dosed at various regimens. Amyloid-β levels in brain and cerebrospinal fluid are measured by ELISA. Amyloid plaque burden is assessed by immunohistochemistry. Cognitive function may be assessed by behavioral tests. Blood and tissue samples are collected for pharmacokinetic analysis. All procedures follow institutional animal care guidelines.
ADME/Pharmacokinetics
NB-360 is a brain-penetrant BACE1 inhibitor. Detailed pharmacokinetic parameters (bioavailability, half-life, brain penetration) are available from preclinical studies. The compound is typically stored at -20°C. It is for research purposes. The compound shows excellent selectivity for BACE1 over other aspartic proteases.
Toxicity/Toxicokinetics
NB-360 is for research use only and not intended for human therapeutic applications. Standard safety pharmacology and toxicology studies would be required for therapeutic development. The compound should be handled with standard laboratory safety precautions. Toxicity data are limited in publicly available sources.
References

[1]. Mol Neurodegener. 2015 Sep 3;10:44. doi: 10.1186/s13024-015-0033-8.

[2]. The β-secretase (BACE) inhibitor NB-360 in preclinical models: From amyloid-β reduction to downstream disease-relevant effects. Br J Pharmacol. 2019 Sep;176(18):3435-3446.

Additional Infomation
NB-360 is a research-grade BACE1 inhibitor for studying Alzheimer's disease and amyloid pathology. Its primary applications include neuroscience, Alzheimer's disease research, and drug discovery. The compound is not approved for clinical use. It is commercially available from various chemical suppliers for research purposes only. Its mechanism involves BACE1 inhibition and reduction of amyloid-β production.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C21H19F4N5O2
Molecular Weight
449.4015
Exact Mass
449.147
Elemental Analysis
C, 56.12; H, 4.26; F, 16.91; N, 15.58; O, 7.12
CAS #
1262857-73-7
Related CAS #
1262857-73-7;1262855-97-9 (HCl);1416433-41-4 (xHCl);
PubChem CID
66665322
Appearance
White to off-white solid powder
LogP
2.2
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
9
Rotatable Bond Count
3
Heavy Atom Count
32
Complexity
812
Defined Atom Stereocenter Count
2
SMILES
CC1=CC(=CN=C1C(=O)NC2=CC(=C(C=C2)F)[C@@]3(CO[C@@](C(=N3)N)(C)C(F)(F)F)C)C#N
InChi Key
BQFHTVUWPJXLOW-VQTJNVASSA-N
InChi Code
InChI=1S/C21H19F4N5O2/c1-11-6-12(8-26)9-28-16(11)17(31)29-13-4-5-15(22)14(7-13)19(2)10-32-20(3,18(27)30-19)21(23,24)25/h4-7,9H,10H2,1-3H3,(H2,27,30)(H,29,31)/t19-,20+/m0/s1
Chemical Name
N-(3-((3R,6R)-5-amino-3,6-dimethyl-6-(trifluoromethyl)-3,6-dihydro-2H-1,4-oxazin-3-yl)-4-fluorophenyl)-5-cyano-3-methylpicolinamide
Synonyms
NB360 NB 360 NB-360
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~250 mg/mL (~556.30 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2252 mL 11.1259 mL 22.2519 mL
5 mM 0.4450 mL 2.2252 mL 4.4504 mL
10 mM 0.2225 mL 1.1126 mL 2.2252 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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