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Nampt-IN-3

Cat No.:V31680 Purity: ≥98%
Nampt-IN-3 is a novel and potent dual inhibitor of nicotinamide phosphoribosyltransferase (NAMPT) and HDAC with anticancer activity.
Nampt-IN-3
Nampt-IN-3 Chemical Structure CAS No.: 2121591-52-2
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
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1mg
5mg
10mg
25mg
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Product Description
Nampt-IN-3 is a novel and potent dual inhibitor of nicotinamide phosphoribosyltransferase (NAMPT) and HDAC with anticancer activity. It inhibits NAMPT and HDAC with IC50s of 31 nM and 55 nM, respectively. Induces cell apoptosis and autophagy, redulting in cell death.


Nampt-IN-3 (Compound 35) is a novel and potent dual inhibitor of nicotinamide phosphoribosyltransferase (NAMPT) and histone deacetylase (HDAC). With a molecular formula of C2₉H2₅N₇O2 and a molecular weight of 503.55, it inhibits NAMPT and HDAC with IC₅0 values of 31 nM and 55 nM, respectively. Nampt-IN-3 effectively induces cell apoptosis and autophagy, ultimately leading to cell death.
Biological Activity I Assay Protocols (From Reference)
Targets
Nampt-IN-3 simultaneously targets nicotinamide phosphoribosyltransferase (NAMPT) and histone deacetylase (HDAC). NAMPT is the rate-limiting enzyme in the NAD+ salvage pathway, playing a critical role in cellular energy metabolism and NAD+ homeostasis. HDACs are enzymes that remove acetyl groups from histone proteins, regulating gene expression. By inhibiting both NAMPT and HDAC with IC₅0 values of 31 nM and 55 nM, respectively, Nampt-IN-3 disrupts NAD+ metabolism and epigenetic regulation, leading to cancer cell death.
ln Vitro
In vitro, Nampt-IN-3 effectively induces cell apoptosis and autophagy, ultimately leading to cell death. It is a potent dual inhibitor of NAMPT and HDAC with IC₅0 values of 31 nM and 55 nM, respectively. By targeting both NAD+ metabolism and epigenetic regulation, the compound exerts potent anti-cancer activity. Its dual inhibitory mechanism makes it a valuable tool for studying the interplay between NAD+ metabolism and epigenetic regulation in cancer.
ln Vivo
In vivo studies of Nampt-IN-3 are limited, as it is primarily used as a research tool in cellular assays. However, given its potent inhibition of NAMPT and HDAC and its ability to induce apoptosis and autophagy in cancer cells, the compound may have potential for in vivo efficacy studies in animal models of cancer. Further studies are needed to evaluate its pharmacokinetic properties, bioavailability, and efficacy in vivo.
Enzyme Assay
For in vitro enzyme/receptor binding assays, Nampt-IN-3 can be evaluated using enzymatic activity assays that measure NAMPT and HDAC activity. For NAMPT, the compound is incubated with recombinant NAMPT enzyme, nicotinamide, and ATP, and the production of NMN is quantified. For HDAC, the compound is incubated with recombinant HDAC enzyme and a fluorogenic acetylated peptide substrate. IC₅0 values are determined from dose-response curves. Selectivity profiling against other NAMPT and HDAC isoforms may be performed.
Cell Assay
For in vitro cellular experiments, Nampt-IN-3 is tested in cancer cell lines to evaluate its effects on cell viability, apoptosis, and autophagy. Cells are cultured in appropriate media and treated with various concentrations of the compound. Cell viability is assessed using MTT or CellTiter-Glo assays. Apoptosis is evaluated using Annexin V staining or caspase activity assays. Autophagy is assessed by measuring LC3-II levels or using autophagy reporter assays. NAD+ and acetylated protein levels are measured to confirm target engagement.
Animal Protocol
For in vivo animal experiments, Nampt-IN-3 can be administered to tumor-bearing mice via various routes, including oral gavage, intravenous injection, or intraperitoneal injection. Xenograft models using human cancer cell lines are commonly used to evaluate antitumor efficacy. Typical dosing regimens may range from 1 to 50 mg/kg. Tumor volume is measured regularly, and tumor growth inhibition is calculated. Pharmacodynamic markers such as NAD+ levels, acetylation, apoptosis, and autophagy are assessed in tumor tissues.
ADME/Pharmacokinetics
Pharmacokinetic properties of Nampt-IN-3 are not extensively detailed in the provided references. As a small molecule with a molecular weight of 503.55, it may have reasonable oral bioavailability and tissue distribution. Detailed parameters such as Cₘₐₓ, Tₘₐₓ, AUC, half-life, and clearance would need to be determined through comprehensive PK studies. The compound's metabolism and excretion pathways remain to be fully characterized.
Toxicity/Toxicokinetics
Toxicological data for Nampt-IN-3 are limited, as it is primarily a research tool. As a dual inhibitor of NAMPT and HDAC, its toxicity would depend on the importance of NAD+ metabolism and epigenetic regulation for normal cellular function. Comprehensive toxicology studies including acute and repeated-dose toxicity, genotoxicity, and cardiotoxicity assessments would be needed for further development. Appropriate safety precautions should be taken when handling this compound.
References

[1]. Small Molecule Inhibitors Simultaneously Targeting Cancer Metabolism and Epigenetics: Discovery of Novel Nicotinamide Phosphoribosyltransferase (NAMPT) and Histone Deacetylase (HDAC) Dual Inhibitors. J Med Chem. 2017 Oct 12;60(19):7965-7983.

Additional Infomation
Nampt-IN-3 is a research compound used to study NAMPT and HDAC biology and develop dual-targeting cancer therapies. No clinical trials or regulatory approvals have been reported for this compound as a therapeutic agent. It is available from various chemical suppliers for research purposes only. The compound effectively induces cell apoptosis and autophagy.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C29H25N7O2
Molecular Weight
503.55
Exact Mass
503.206
CAS #
2121591-52-2
PubChem CID
137634086
Appearance
White to off-white solid powder
LogP
2.8
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
6
Rotatable Bond Count
8
Heavy Atom Count
38
Complexity
766
Defined Atom Stereocenter Count
0
SMILES
C1(NC(C2=CC=C(CN3N=NC(C4=CC=C(C=C4)C(=O)NCC4=CN=CC=C4)=C3)C=C2)=O)=C(C=CC=C1)N
InChi Key
LSGNVZAEAAZOEH-UHFFFAOYSA-N
InChi Code
InChI=1S/C29H25N7O2/c30-25-5-1-2-6-26(25)33-29(38)24-9-7-20(8-10-24)18-36-19-27(34-35-36)22-11-13-23(14-12-22)28(37)32-17-21-4-3-15-31-16-21/h1-16,19H,17-18,30H2,(H,32,37)(H,33,38)
Chemical Name
N-(2-aminophenyl)-4-[[4-[4-(pyridin-3-ylmethylcarbamoyl)phenyl]triazol-1-yl]methyl]benzamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~130 mg/mL (~258.17 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 1.9859 mL 9.9295 mL 19.8590 mL
5 mM 0.3972 mL 1.9859 mL 3.9718 mL
10 mM 0.1986 mL 0.9930 mL 1.9859 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

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  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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