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MMP3 inhibitor 1

Cat No.:V30956 Purity: ≥98%
MMP3 inhibitor 1 is a potent and selective MMP-3 inhibitor (antagonist) with IC50 of 1 nM.
MMP3 inhibitor 1
MMP3 inhibitor 1 Chemical Structure CAS No.: 312930-75-9
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
1mg
5mg
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Product Description
MMP3 inhibitor 1 is a potent and selective MMP-3 inhibitor (antagonist) with IC50 of 1 nM.
MMP3 inhibitor 1 (CAS 312930-75-9) is a potent and highly selective small-molecule inhibitor of matrix metalloproteinase-3 (MMP-3). It exhibits an IC50 of 1 nM for MMP-3. It also inhibits MMP-1, MMP-2, MMP-9, and MMP-14, albeit with much lower potency, with IC50 values of 14000 nM, 529 nM, 2420 nM, and 20100 nM, respectively. This high selectivity for MMP-3 makes it a valuable tool for studying the specific role of MMP-3 in various biological processes and diseases.
Biological Activity I Assay Protocols (From Reference)
Targets
The primary target of MMP3 inhibitor 1 is matrix metalloproteinase-3 (MMP-3), also known as stromelysin-1. MMP-3 is a member of the matrix metalloproteinase family of zinc-dependent endopeptidases that are involved in the degradation of extracellular matrix components. It is a potent and highly selective inhibitor, with an IC50 of 1 nM for MMP-3. It shows significantly lower activity against other MMPs, including MMP-1 (IC50 = 14000 nM), MMP-2 (IC50 = 529 nM), MMP-9 (IC50 = 2420 nM), and MMP-14 (IC50 = 20100 nM).
ln Vitro
MMP3 inhibitor 1 (compound 27) has an IC50 of 14000, 529, 2420, and 20100 nM, respectively, for MMP-1, MMP-2, MMP-9, and MMP-14 [1].
In vitro, MMP3 inhibitor 1 is a potent and highly selective inhibitor of MMP-3, with an IC50 of 1 nM. It also inhibits MMP-1, MMP-2, MMP-9, and MMP-14 with IC50s of 14000, 529, 2420, and 20100 nM, respectively. This high selectivity for MMP-3 allows researchers to dissect the specific role of this enzyme from other MMPs in complex biological systems. It is used in biochemical assays to validate MMP-3 as a therapeutic target.
ln Vivo
In vivo, MMP3 inhibitor 1 is used as a research tool to study the role of MMP-3 in disease models. Its high selectivity allows for the specific inhibition of MMP-3, helping to elucidate its function in conditions such as arthritis, cancer, and cardiovascular disease. However, specific in vivo efficacy data for this compound are limited. It is a valuable tool for target validation and mechanistic studies. It is not approved for clinical use.
Enzyme Assay
Cell-free enzyme assays for MMP3 inhibitor 1 typically use recombinant human MMP-3 enzyme. A standard protocol involves incubating the enzyme with a fluorogenic peptide substrate (e.g., Mca-PLGL-Dpa-AR-NH2) and varying concentrations of the inhibitor in a reaction buffer. The reaction is carried out at 37degC, and the increase in fluorescence due to substrate cleavage is measured over time. The IC50 is determined from the dose-response curve. The selectivity of the compound is assessed by testing its activity against a panel of other MMPs.
Cell Assay
For in vitro cellular experiments, cells that produce MMP-3, such as fibroblasts or cancer cells, are cultured in appropriate media. Cells are treated with MMP3 inhibitor 1 at various concentrations (typically 1 nM to 10 uM). MMP-3 activity in the cell culture supernatant is measured using a fluorogenic substrate assay or by gelatin zymography. Cell proliferation, migration, and invasion can be assessed to study the functional consequences of MMP-3 inhibition. These experiments define its cellular potency and efficacy.
Animal Protocol
In vivo animal experiments with MMP3 inhibitor 1 are typically conducted in mouse models of disease where MMP-3 is implicated, such as arthritis or cancer. A common protocol involves administering the compound via intraperitoneal (IP) or oral (PO) injection at various doses (e.g., 1-50 mg/kg). Disease progression is monitored using appropriate endpoints, such as joint swelling in arthritis models or tumor growth in cancer models. MMP-3 activity in tissues is assessed by Western blot or activity assays.
ADME/Pharmacokinetics
MMP3 inhibitor 1 has a molecular weight of 477.57 g/mol and a molecular formula of C23H31N3O6S. It is a small molecule that is soluble in DMSO. For in vivo studies, it can be formulated in a vehicle such as DMSO, PEG300, or saline. It should be stored as a powder at -20degC, protected from light and moisture. Its pharmacokinetic properties, including oral bioavailability and half-life, would need to be characterized for therapeutic development.
Toxicity/Toxicokinetics
The toxicity profile of MMP3 inhibitor 1 has not been extensively characterized. As a selective MMP-3 inhibitor, it is expected to have fewer off-target effects than broad-spectrum MMP inhibitors, which have been associated with significant toxicity. However, the role of MMP-3 in normal physiological processes means that its inhibition could have consequences. It is for research use only and not for human therapeutic use. It should be handled with standard laboratory precautions.
References

[1]. A novel series of highly selective inhibitors of MMP-3. Bioorg Med Chem Lett. 2007 Dec 15;17(24):6750-3.

Additional Infomation
MMP3 inhibitor 1 (Compound 27) is a potent and highly selective small-molecule inhibitor of matrix metalloproteinase-3 (MMP-3), with an IC50 of 1 nM. It shows much lower activity against other MMPs, including MMP-1, MMP-2, MMP-9, and MMP-14. This high selectivity makes it a valuable tool for studying the specific role of MMP-3 in various biological processes and diseases. It is not approved for clinical use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C23H31N3O6S
Molecular Weight
477.573745012283
Exact Mass
477.193
CAS #
312930-75-9
PubChem CID
9956699
Appearance
White to off-white solid powder
LogP
1.8
Hydrogen Bond Donor Count
3
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
8
Heavy Atom Count
33
Complexity
748
Defined Atom Stereocenter Count
0
SMILES
S(C(C(NO)=O)(C)C)(N1CCC(C2C=CC(C3C=CC=C(N=3)OCCO)=C(C)C=2)CC1)(=O)=O
InChi Key
YVBOXQAMDNUBQA-UHFFFAOYSA-N
InChi Code
InChI=1S/C23H31N3O6S/c1-16-15-18(7-8-19(16)20-5-4-6-21(24-20)32-14-13-27)17-9-11-26(12-10-17)33(30,31)23(2,3)22(28)25-29/h4-8,15,17,27,29H,9-14H2,1-3H3,(H,25,28)
Chemical Name
N-hydroxy-2-[4-[4-[6-(2-hydroxyethoxy)pyridin-2-yl]-3-methylphenyl]piperidin-1-yl]sulfonyl-2-methylpropanamide
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.0939 mL 10.4697 mL 20.9393 mL
5 mM 0.4188 mL 2.0939 mL 4.1879 mL
10 mM 0.2094 mL 1.0470 mL 2.0939 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • Enter 5 in the Volume box and choose the correct unit (mL)
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

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Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
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  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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