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ML298 free base

Alias: ML 298; ML-298; ML298
Cat No.:V25670 Purity: ≥98%
ML298 is a potent and specific inhibitor of phospholipase D2 (PLD2) with IC50 of 355 nM.
ML298 free base
ML298 free base Chemical Structure CAS No.: 1426916-02-0
Product category: New1
This product is for research use only, not for human use. We do not sell to patients.
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Product Description
ML298 is a potent and specific inhibitor of phospholipase D2 (PLD2) with IC50 of 355 nM. ML298 reduces invasive migration of U87-MG glioblastoma cells.
ML298 free base is a potent and specific inhibitor of phospholipase D2 (PLD2) with an IC50 of 355 nM. It reduces invasive migration of U87-MG glioblastoma cells. ML298 is used as a chemical tool to study phospholipase D2 biology and its role in cell signaling, migration, and cancer progression. The compound has a molecular weight of 432.44 g/mol and molecular formula C22H23F3N4O2.
Biological Activity I Assay Protocols (From Reference)
Targets
PLD2 (phospholipase D2).
ln Vitro
ML298 is a potent and specific inhibitor of phospholipase D2 with an IC50 of 355 nM. It reduces invasive migration of U87-MG glioblastoma cells. The compound is an effective metabolism inhibitor that prevents cell metabolism by inhibiting phospholipases. ML298 is used as a chemical probe to study PLD2 biology and its role in cell signaling, migration, and cancer progression. It is a valuable tool for studying phospholipase-mediated signaling pathways.
ln Vivo
In vivo efficacy data for ML298 is limited. The compound is primarily used as an in vitro tool for studying PLD2 biology and cell migration. It reduces invasive migration of glioblastoma cells in vitro, suggesting potential applications in cancer research. Further in vivo studies in tumor xenograft models would be needed to assess its therapeutic potential in cancer and other diseases where PLD2 plays a role.
Enzyme Assay
The in vitro enzyme assay for PLD2 inhibition uses recombinant human PLD2 enzyme and a phospholipid substrate (e.g., phosphatidylcholine). The enzyme is incubated with the substrate and varying concentrations of ML298 (typically 0.1 nM to 100 µM) at 37°C for 30-60 minutes. The product (phosphatidic acid) is quantified by measuring the release of choline using a choline oxidase-coupled assay or by using radiolabeled substrates. The IC50 is calculated from dose-response curves. Selectivity is assessed by profiling against PLD1 and other phospholipases.
Cell Assay
In vitro cellular assays are performed using U87-MG glioblastoma cells or other cancer cell lines. Cells are treated with ML298 at concentrations ranging from 0.01 to 100 µM for 24-72 hours. Cell migration and invasion are assessed using Transwell or Boyden chamber assays. Cell proliferation is measured using MTT or CellTiter-Glo assays. PLD2 activity in cells is confirmed by measuring phosphatidic acid production or by using fluorescently labeled phospholipid substrates. Apoptosis is assessed by Annexin V/PI staining and flow cytometry.
Animal Protocol
In vivo animal model data for ML298 is not extensively reported in the literature. As a research tool for studying PLD2 biology in cancer, the compound would typically be evaluated in mouse xenograft models using glioblastoma or other cancer cell lines. Standard efficacy studies would involve tumor growth inhibition and inhibition of metastasis as primary endpoints. Pharmacokinetic studies would assess oral bioavailability, plasma half-life, and tissue distribution. The compound is primarily used as a molecular probe for in vitro studies.
ADME/Pharmacokinetics
ML298 free base has a molecular weight of 432.44 g/mol and molecular formula C22H23F3N4O2. It is soluble in DMSO and should be stored as a powder at -20°C. Pharmacokinetic parameters such as oral bioavailability, plasma half-life, and tissue distribution are not extensively characterized in publicly available literature. As a research compound, it is typically used in in vitro assays at concentrations ranging from nanomolar to low micromolar.
Toxicity/Toxicokinetics
No detailed toxicity data is publicly available for ML298. As a research compound, it is not intended for human use and has not undergone formal toxicological evaluation. Standard preclinical safety assessments for phospholipase inhibitors would typically include selectivity profiling against a panel of related enzymes to assess off-target effects, hERG channel inhibition for cardiac safety, and CYP450 enzyme inhibition for drug-drug interaction potential. The compound is supplied as a solid and should be stored desiccated at -20°C.
References

[1]. Development of dual PLD1/2 and PLD2 selective inhibitors from a common 1,3,8-Triazaspiro[4.5]decane Core: discovery of Ml298 and Ml299 that decrease invasive migration in U87-MG glioblastoma cells. J Med Chem. 2013 Mar 28;56(6):2695-9.

Additional Infomation
ML298 is a research-grade PLD2 inhibitor that reduces invasive migration of glioblastoma cells. It is not approved for clinical use. The compound is also known as ML-298. It is a potent and specific PLD2 inhibitor with IC50 of 355 nM. ML298 is used as a chemical tool to study PLD2 biology, cell signaling, and cancer progression. It is supplied as a free base form with high purity and should be stored desiccated at -20°C.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C22H23F3N4O2
Molecular Weight
432.4472
Exact Mass
432.177
CAS #
1426916-02-0
PubChem CID
53393916
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Boiling Point
650.5±55.0 °C at 760 mmHg
Flash Point
347.2±31.5 °C
Vapour Pressure
0.0±1.9 mmHg at 25°C
Index of Refraction
1.620
LogP
1.7
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
7
Rotatable Bond Count
5
Heavy Atom Count
31
Complexity
659
Defined Atom Stereocenter Count
0
SMILES
C1CN(CCC12C(=O)NCN2C3=CC(=CC=C3)F)CCNC(=O)C4=CC(=C(C=C4)F)F
InChi Key
XAPVAKKLQGLNOY-UHFFFAOYSA-N
InChi Code
InChI=1S/C22H23F3N4O2/c23-16-2-1-3-17(13-16)29-14-27-21(31)22(29)6-9-28(10-7-22)11-8-26-20(30)15-4-5-18(24)19(25)12-15/h1-5,12-13H,6-11,14H2,(H,26,30)(H,27,31)
Chemical Name
3,4-difluoro-N-[2-[1-(3-fluorophenyl)-4-oxo-1,3,8-triazaspiro[4.5]decan-8-yl]ethyl]benzamide
Synonyms
ML 298; ML-298; ML298
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~125 mg/mL (~289.06 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.3124 mL 11.5620 mL 23.1241 mL
5 mM 0.4625 mL 2.3124 mL 4.6248 mL
10 mM 0.2312 mL 1.1562 mL 2.3124 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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