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Methyl-β-cyclodextrin

Alias: 128446-36-6; Methyl-b-cyclodextrin; Methyl-; A-cyclodextrin; MFCD00074980;
Cat No.:V33326 Purity: ≥98%
Methyl-β-cyclodextrin, therandomly methylated form of β-cyclodextrin, is a cyclic heptasaccharideused to improve the water solubility of non-polar compounds such as fatty acids, lipids, vitamins and cholesterol for use in cell culture applicationsand to extract cholesterol from lipid membranes.
Methyl-β-cyclodextrin
Methyl-β-cyclodextrin Chemical Structure CAS No.: 128446-36-6
Product category: Biochemical Assay Reagents
This product is for research use only, not for human use. We do not sell to patients.
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Purity & Quality Control Documentation

Purity: ≥98%

Product Description

Methyl-β-cyclodextrin, the randomly methylated form of β-cyclodextrin, is a cyclic heptasaccharide used to improve the water solubility of non-polar compounds such as fatty acids, lipids, vitamins and cholesterol for use in cell culture applications and to extract cholesterol from lipid membranes. As a cyclic heptasaccharide, it can also be used to deliver hydrophobic drugs based on its property of solubilizing non-polar substances. Methyl-β-cyclodextrin is also extensively used as a cholesterol-depleting reagent. Methyl-β-cyclodextrin strongly reduces clathrin-dependent endocytosis.

Biological Activity I Assay Protocols (From Reference)
Targets
IC50: 3.33-4.23 mM (PEL cell growth)[1]; Solubility enhancer;
Deodorizer
Actin cytoskeleton. Treatment with 1 mM Methyl-β-cyclodextrin (MCD) for 4 hours significantly depolymerized the actin network in HeLa cells, reducing the fluorescence intensity of phalloidin-stained actin filaments by 49 ± 3% (p < 0.01). MCD did not perturb the microtubule network [1]
Plasma membrane cholesterol. Methyl-β-cyclodextrin (MβCD) selectively extracts cholesterol from the plasma membrane of mammalian cells [2]
ln Vitro
For the purpose of enhancing the intake of tiny molecules like glucose and nanoparticles, methyl-β-cyclodextrin is widely employed to raise the permeability of cells[4]. Cyclodextrins are a kind of cyclic oligosaccharides that have a lipophilic core chamber and a hydrophilic outside. Generally speaking, cyclodextrin molecules do not penetrate lipophilic membranes since they are rather big molecules with many hydrogen sources and acceptors. The principal application of cyclodextrins in the pharmaceutical industry has been as complexing agents to improve the aqueous solubility, bioavailability, and stability of poorly soluble medicines. Drugs' bioavailability is one of the many uses for cyclodextrins in medicinal applications[4]. By rapidly removing cholesterol from the plasma membrane, methyl-β-cyclodextrin causes PEL cells to undergo caspase-dependent death. All PEL cell lines are inhibited in their development by methyl-β-cyclodextrin in a way that is dose dependent. Every cell line has an IC50 of 3.33–4.23 mM[5]. Among the several agents that deplete cholesterol from cells, methyl-β-cyclodextrin—a highly soluble cyclic heptasaccharide with a β glucopyranose unit—has been found to be the most efficient[5].
Methyl-β-cyclodextrin (MCD) (1 mM, 4h) depolymerized the actin cytoskeleton in HeLa cells, reducing F-actin fluorescence intensity by 49%. This led to a 56% reduction in paxillin focal adhesion area and a 66% reduction in phosphorylated focal adhesion kinase (pFAK) area. Atomic force microscopy showed a 50% decrease in cell stiffness (from 4.3 ± 0.3 kPa to 2.1 ± 0.2 kPa). Traction force microscopy revealed a 65% reduction in cellular traction force (from 367 ± 15 Pa to 128 ± 11 Pa). MCD treatment increased the intracellular accumulation of microtubule-targeting agents (MTAs) like BODIPY-vinblastine, crocin, and curcumin by approximately 50% compared to untreated cells. Pretreatment with 1 mM MCD for 4 hours potentiated the antiproliferative effects of vinblastine, taxol, and crocin in HeLa cells, lowering their IC50 values. For example, the IC50 of vinblastine decreased from 4.2 ± 0.1 nM (alone) to 1.9 ± 0.2 nM (with MCD pretreatment). MCD pretreatment also augmented the effects of vinblastine on cell cycle arrest at G2/M phase and enhanced the disruption of interphase and mitotic microtubules by vinblastine, taxol, and crocin. Furthermore, the combination of low-dose MCD (0.25 or 1 mM) with vinblastine synergistically inhibited HeLa cell proliferation, with Combination Index (CI) values of 0.55 and 0.43, respectively. Similar sensitization effects of MCD pretreatment were observed in breast (MCF-7), liver (Huh7), prostate (PC3) cancer cells, and a multidrug-resistant breast cancer cell line (EMT6/AR1) [1]
Pretreatment with 1 mM MCD for 4 hours alone did not affect HeLa cell proliferation up to 24 hours, but higher concentrations showed inhibitory effects [1]
Pretreatment of various cell lines (HEp-2, NIH/3T3, MDCK II, A431) with 10 mM Methyl-β-cyclodextrin (MβCD) for 15 minutes at 37°C strongly inhibited clathrin-dependent endocytosis. Endocytosis of transferrin was reduced by approximately 50% across all tested cell lines. Endocytosis of epidermal growth factor (EGF) was also strongly reduced (by ~40%). In contrast, endocytosis of ricin, a general membrane marker that enters via both clathrin-dependent and -independent pathways, was less affected, showing only about 20% inhibition. This differential effect suggests that MβCD specifically perturbs clathrin-dependent endocytosis more than clathrin-independent pathways. The inhibition of transferrin endocytosis was concentration-dependent (50% reduction at ~10 mM MβCD) and was completely reversible upon removal of MβCD. Recovery of endocytosis occurred over time (fully by 3 hours) even in serum-free medium and was dependent on cholesterol synthesis, as it was inhibited by lovastatin (an inhibitor of cholesterol synthesis) unless water-soluble cholesterol was added concurrently. Electron microscopy revealed that MβCD treatment caused the disappearance of typically invaginated caveolae and strongly inhibited the invagination of clathrin-coated pits, leading to an accumulation of shallow, flattened pits. However, quantitative immunogold labeling showed that transferrin receptors (TfRs) were still concentrated in these shallow coated pits to the same degree (~7-fold) as in control cells. Surface binding of transferrin was increased nearly twofold after MβCD treatment, consistent with inhibited internalization. Treatment with 10 mM MβCD did not significantly affect cellular protein synthesis or intracellular potassium content, indicating no large-scale plasma membrane permeability changes under these conditions [2]
The inhibitory effect on transferrin endocytosis was specific to cyclodextrins capable of binding cholesterol (MβCD and β-cyclodextrin), while α-cyclodextrin and γ-cyclodextrin had no significant effect [2]
Treatment with Methyl-β-cyclodextrin blocked migrasome formation in cells, indicating that cholesterol is necessary for migrasome biogenesis[3]
ln Vivo
Methyl-β-cyclodextrin effectively suppresses PEL cell growth and invasion in a PEL xenograft mice model without causing any evident side effects. Mice treated with methyl-β-cyclodextrin seem healthy, whereas those not treated have enlarged abdomens. The mice treated with methyl-β-cyclodextrin had significantly lower body weights than the control group. Mice treated with methyl-β-cyclodextrin had a much smaller volume of ascites than mice not treated with it[4]. Cyclodextrins have been found in studies on humans and animals to be useful in enhancing the distribution of nearly any kind of medication formulation. Around 30 distinct pharmaceutical products with drug/cyclodextrin complexes are available on the market at the moment[6] throughout the world.
Cell Assay
PEL cells are incubated in triplicate in a 96-well microculture plate in the presence of different concentrations of methyl-β-cyclodextrin (0-10 mM) in a final volume of 0.1 mL for 24 h at 37°C. Subsequently, MTT (0.5 mg/mL final concentration) is added to each well. After 3 h of additional incubation, 100 μL of a 0.04 N HCl is added to dissolve the crystals. Absorption values at 570 nm are determined[1].
Tetrazolium dye methylthiotetrazole (MTT) assay[5]
The antiproliferative activities of M-β-CyD against PEL cell lines were measured by the methylthiotetrazole (MTT) method. Briefly, 2 × 104 cells were incubated in triplicate in a 96-well microculture plate in the presence of different concentrations of M-β-CyD (0–10 mM) in a final volume of 0.1 ml for 24 h at 37 °C. Subsequently, MTT (0.5 mg/ml final concentration) was added to each well. After 3 h of additional incubation, 100 μl of a 0.04 N HCl was added to dissolve the crystals. Absorption values at 570 nm were determined with an automatic enzyme-linked immunosorbent assay (ELISA) plate reader. Values were normalized to untreated (control) samples.

Cell viability assay[5]
Cell viability was examined by the propidium iodide (PI) exclusion method as described previously. Briefly, BCBL-1 cells (2 × 105 cells/ml) were cultured in the presence or absence of M-β-CyD for 1–6 h in 6-well culture plates. After being incubated, cells were stained with PI (final concentration; 2 μg/ml) and cell viability was analyzed by LSR II flow cytometry.


1) Immunofluorescence for Cytoskeleton and Focal Adhesions: Cells were seeded on coverslips, treated with 1 mM Methyl-β-cyclodextrin (MCD) for 4 hours, and subsequently with other drugs as specified. After incubation, cells were fixed, permeabilized, and blocked. They were incubated with primary antibodies (e.g., anti-β-tubulin, anti-paxillin, anti-pFAK) overnight at 4°C, followed by appropriate fluorescent secondary antibodies. Actin was stained using fluorescent phalloidin, and nuclei were stained with Hoechst. Images were captured using a confocal microscope, and fluorescence intensity or focal adhesion area was quantified using image analysis software [1]
2) Drug Accumulation Assay: Cells were treated with 1 mM MCD for 4 hours. The medium was replaced with fresh medium containing fluorescent drugs (e.g., 5 nM BODIPY-vinblastine for 6h; 1 µM crocin or 5 µM curcumin for 24h). Cells were then trypsinized, washed, counted, and lysed. The fluorescence (for BODIPY-vinblastine) or absorbance (for crocin and curcumin) of the supernatant (cytosolic extract) was measured to determine intracellular drug concentration relative to untreated controls [1]
3) Cell Proliferation Assay (Sulforhodamine B assay): Cells were seeded in a plate, allowed to attach, and then incubated with 1 mM MCD (or 200 nM Latrunculin B as a positive control) for 4 hours. The medium was replaced with fresh medium containing varying concentrations of the test drug (e.g., vinblastine, taxol, crocin). After incubation for one cell cycle, cells were fixed, stained with Sulforhodamine B dye, and the absorbance was measured at 520 nm to determine the inhibition of proliferation and calculate IC50 values [1]
4) Cell Cycle Analysis by Flow Cytometry: Cells were treated with 1 mM MCD for 4 hours, followed by incubation with a drug (e.g., 5 nM vinblastine) for 24 hours. Cells were then fixed, treated with RNase A and propidium iodide (PI), and analyzed by flow cytometry to determine DNA content and cell cycle distribution [1]
5) BrdU Assay: Cells on coverslips were treated with 1 mM MCD for 4 hours (or left untreated), followed by treatment with 5 nM vinblastine for 8 hours. BrdU reagent was added for the last 4 hours of incubation. Cells were then processed for immunofluorescence using an anti-BrdU antibody and a fluorescent secondary antibody to label cells in S-phase. Nuclei were counterstained with Hoechst. The percentage of BrdU-positive cells was manually counted [1]
6) Trypsin Deadhesion Assay: Cells were seeded on coverslips and treated with drugs. After treatment, trypsin was added, and time-lapse images were captured at intervals until cells completely detached. Cell area over time was quantified, and time constants (τ1 and τ2) describing detachment kinetics were calculated using curve-fitting software [1]
7) Traction Force Microscopy (TFM): Cells were seeded on soft polyacrylamide gels embedded with fluorescent beads and coated with collagen. After treatment with MCD and/or other drugs, phase-contrast images of cells and fluorescence images of the beads were taken. Cells were then lysed, and bead images were taken again. Bead displacement fields were calculated, and traction forces exerted by cells were computed using specialized analysis code [1]
8) Atomic Force Microscopy (AFM): Cells on coverslips were treated with 1 mM MCD for 4 hours. A pyramidal tip probe was used in contact mode to obtain force curves on the cell surface. The stiffness (Young's modulus) of the cells was calculated by fitting the force curves with the Hertz model [1]
9) Determination of Combination Index: Cells were incubated with different concentrations of vinblastine in combination with either 0.25 mM or 1 mM MCD for 24 hours. Cell proliferation was assessed. The median dose (Dm) for each agent alone was determined from dose-response curves. The Combination Index (CI) was calculated using the Chou and Talalay method, where CI < 1 indicates synergy [1]
1) Endocytosis Assays (Transferrin, EGF, Ricin): Cells were washed and preincubated with or without Methyl-β-cyclodextrin (MβCD) (e.g., 10 mM) in HEPES-buffered medium for 15 minutes at 37°C. Radiolabeled ligands (¹²⁵I-transferrin, ¹²⁵I-EGF, or ¹²⁵I-ricin) were then added to the cells. For transferrin and EGF, after a short incubation (5 or 10 minutes) at 37°C, surface-bound ligand was removed (using protease treatment for transferrin or low-pH buffer wash for EGF). The remaining cell-associated radioactivity (representing endocytosed ligand) was measured using a gamma counter. For ricin, after a 15-minute incubation, cells were washed with medium containing lactose to remove surface-bound toxin, and the internalized radioactivity was measured [2]
2) Cholesterol Extraction Assay: Cells were labeled with [³H]cholesterol either briefly (15 min) to label the cell surface or for 20 hours to equilibrate with intracellular pools. After washing, cells were incubated with or without 10 mM MβCD in medium for various times (15, 30, 60 min) at 37°C. Cells were then lysed, and the remaining radioactivity in the lysate was measured by scintillation counting to determine the percentage of cholesterol extracted [2]
3) Electron Microscopy and Morphometric Analysis: Cells treated with or without MβCD were fixed with formaldehyde/glutaraldehyde, post-fixed with osmium tetroxide, and processed for embedding in resin. Ultrathin sections were stained and examined by electron microscopy. The frequency of invaginated caveolae and the morphology of clathrin-coated pits (classified as shallow, invaginated, or nearly pinched-off) were quantified [2]
4) Immunogold Labeling for Transferrin Receptors: Cells were fixed, incubated with a primary anti-transferrin receptor antibody, followed by a secondary antibody conjugated to colloidal gold particles. After processing for electron microscopy, the distribution of gold particles on the cell surface (within coated pits vs. outside pits) was quantified to calculate the concentration efficiency of receptors in coated pits [2]
5) Protein Synthesis Assay: Cells were treated with or without MβCD, then incubated with [³H]leucine for 10 minutes. Cells were washed, precipitated with trichloroacetic acid, and the incorporated radioactivity in the precipitated protein was measured using a beta-counter [2]
6) Intracellular Potassium Measurement: Cells treated with or without MβCD were washed with magnesium chloride, air-dried, and dissolved in sodium hydroxide. The potassium content in the solution was determined using ion-selective electrodes [2]
7) Reversibility and Cholesterol Dependence Assay: Cells were treated with MβCD to inhibit endocytosis, then the medium was replaced with fresh medium without MβCD. Cells were further incubated for varying times (15 min to 3 hours) in the presence or absence of fetal calf serum, water-soluble cholesterol, and/or lovastatin. After this recovery period, transferrin endocytosis was measured as described above to assess recovery [2]
Cells were treated with Methyl-β-cyclodextrin to deplete cholesterol. After treatment, migrasome formation was assessed by confocal microscopy. The treatment resulted in inhibition of migrasome formation, supporting the role of cholesterol in migrasome assembly[3]
Animal Protocol
NOD/Rag-2/Jak3-double deficient (NRJ) mice were housed and monitored in our animal research facility according to institutional guidelines. All experimental procedures and protocols were approved by the Institutional Animal Care and Use Committee at Kumamoto University. Eight- to ten-week-old female NRJ mice were intraperitoneally inoculated with 7 × 106 BCBL-1 cells suspended in 200 μl PBS. The mice were then treated with intraperitoneal injections of PBS or M-β-CyD (500 mg/kg per day). Tumor burdens were evaluated by measuring body weights and ascites.[5]
Toxicity/Toxicokinetics
No significant membrane leakage was observed after treating cells with 10 mM methyl-β-cyclodextrin (MβCD) for 15 minutes. This was reflected in the fact that protein synthesis was not reduced in various cell lines (HEp-2, MDCK II, A431, NIH/3T3), and the intracellular potassium content did not change. [2]
References

[1]. Methyl-β-cyclodextrin, an actin depolymerizer augments the antiproliferative potential of microtubule-targeting agents. Sci Rep. 2019 May 21;9(1):7638.

[2]. Extraction of cholesterol with methyl-beta-cyclodextrin perturbs formation of clathrin-coated endocytic vesicles. Mol Biol Cell. 1999;10(4):961-974.

[3]. Migrasome formation is mediated by assembly of micron-scale tetraspanin macrodomains. Nat Cell Biol. 2019 Aug;21(8):991-1002.

[4]. Cholesterol depletion from the plasma membrane triggers ligand-independent activation of the epidermal growth factor receptor. J Biol Chem. 2002 Dec 20;277(51):49631-7.

[5]. The antitumor effects of methyl-β-cyclodextrin against primary effusion lymphoma via the depletion of cholesterol from lipid rafts. Biochem Biophys Res Commun. 2014 Dec 12;455(3-4):285-9.

[6]. Cyclodextrins in delivery systems: Applications. J Pharm Bioallied Sci. 2010 Apr;2(2):72-9.

Additional Infomation
Cyclodextrins (CDs) are a class of cyclic oligosaccharides with a hydrophilic outer surface and a lipophilic central cavity. CD molecules are relatively large and contain multiple hydrogen donors and acceptors, making them generally difficult to penetrate lipophilic membranes. In the pharmaceutical industry, CDs are mainly used as complexing agents to improve the water solubility of poorly soluble drugs and enhance their bioavailability and stability. CDs have a wide range of applications in drug use, including improving the bioavailability of drugs. This article introduces current CD-based therapeutics and explores their potential future applications. In addition, this article reviews CD-containing polymers and their applications in drug delivery. Of particular interest are the unique advantages of CD-containing polymers in nucleic acid delivery. Human and animal studies have shown that CDs can be used to improve the delivery of almost any type of drug formulation. Currently, there are about 30 drugs containing drug/cyclodextrin complexes on the global market. [6]
Primary exudative lymphoma (PEL) is a highly aggressive and chemotherapy-resistant subtype of non-Hodgkin lymphoma that mainly occurs in patients with advanced AIDS. This study investigated the antitumor activity of methyl-β-cyclodextrin (M-β-CyD) in vitro and in vivo. M-β-CyD rapidly induced caspase-dependent apoptosis in PEL cells by depleting cholesterol on the cell membrane. In a PEL xenograft mouse model, M-β-CyD significantly inhibited the growth and invasion of PEL cells without any obvious adverse reactions. These results strongly suggest that M-β-CyD has the potential to become an effective antitumor drug for PEL. [5] Methyl-β-cyclodextrin (MCD) is a known pharmacological excipient that can depolymerize the actin cytoskeleton. This study investigated the effects of MCD-mediated actin depolymerization on various cell phenotypes, including traction, cell stiffness, focal adhesion, and intracellular drug accumulation. In addition to reducing cell contractile traction, MCD also significantly inhibited the maturation of focal adhesion. Changes in contractile force and focal adhesion affect trypsin-mediated cell detachment dynamics. In addition, MCD-mediated actin depolymerization increased the intracellular accumulation of microtubule-targeting drugs (MTAs) by about 50% compared to untreated cells. Since MCD treatment can increase the intracellular concentration of drugs, we hypothesized that low-dose MTAs could effectively kill MCD-sensitive cancer cells. Our experimental results in cervical cancer, breast cancer, hepatocellular carcinoma, prostate cancer and multidrug-resistant breast cancer cells confirmed the above hypothesis. In addition, the combined use of MCD and MTAs synergistically inhibited tumor cell proliferation. These results suggest that the combination of MCD and microtubule-targeting drugs (MTAs) for cancer chemotherapy has potential application value and suggests that simultaneous targeting of actin and microtubules may be beneficial for cancer treatment. Importantly, these results provide important insights into the interaction between actin and microtubules in regulating cell adhesion and dynamics. [1]
Researchers used methyl-β-cyclodextrin (MβCD) to selectively extract cholesterol from the plasma membrane and studied the importance of cholesterol in endocytosis in HEp-2 and other cell lines. MβCD treatment significantly inhibited the endocytosis of transferrin and EGF, while having little effect on the endocytosis of ricin. The inhibition of transferrin endocytosis was completely reversible. After removal of MβCD, transferrin endocytosis recovered even after cell culture in serum-free medium. In serum-free medium, the addition of lovastatin (a cholesterol synthesis inhibitor) inhibited the recovery of endocytosis, but endocytosis was restored when water-soluble cholesterol and lovastatin were added simultaneously. Electron microscopy showed that the typical invaginations in MβCD-treated HEp-2 cells disappeared. Furthermore, the invagination of clathrin-coated pits was significantly inhibited, leading to the accumulation of superficial clathrin-coated pits. Quantitative immunogold labeling experiments showed that the concentration of transferrin receptors in clathrin-coated pits after MβCD treatment was the same as that in the control group (approximately 7-fold). Therefore, our results suggest that although clathrin-independent (and pit-independent) endocytosis still exists after cholesterol removal, cholesterol is essential for the formation of clathrin-coated endocytic vesicles. [2] Methyl-β-cyclodextrin (MCD) is a commonly used pharmacological excipient for improving the solubility, stability and bioavailability of drugs. It has good biocompatibility, and some Derivative have been approved by the FDA. This study shows that MCD can depolymerize the actin cytoskeleton, thereby increasing the permeability of the plasma membrane. This property enables it to enhance intracellular accumulation and efficacy when combined with microtubule-targeting drugs (MTAs) such as vincristine and paclitaxel. This study suggests that combining actin cytoskeleton perturbation (via MCD) with microtubule perturbation (via MTAs) is a potential strategy to overcome drug resistance and improve cancer chemotherapy. [1] In this study, methyl-β-cyclodextrin (MβCD) was used as a tool for selectively removing cholesterol from the plasma membrane. The results showed that cholesterol was crucial for the invagination and vesicle formation stages of clathrin-dependent endocytosis, but not essential for the initial assembly of the clathrin shell or the concentration of specific receptors (such as transferrin receptors) within these encapsulated pits. The study also indicated that the non-clathrin-dependent (and pit-dependent) endocytic pathway was less sensitive to cholesterol removal [2]. Methyl-β-cyclodextrin was used as a cholesterol removal agent to investigate the role of cholesterol in migratory body formation. The study showed that cholesterol depletion impaired migratory body formation, suggesting that cholesterol is an important component of the migratory body membrane domains [3].
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C54H94O35
Molecular Weight
1303.3032
Exact Mass
1302.557
CAS #
128446-36-6
PubChem CID
51051622
Appearance
White to off-white solid powder
Density
1.4±0.1 g/cm3
Boiling Point
1206.9±65.0 °C at 760 mmHg
Melting Point
180-182ºC
Flash Point
683.7±34.3 °C
Vapour Pressure
0.0±0.6 mmHg at 25°C
Index of Refraction
1.567
LogP
6.95
Hydrogen Bond Donor Count
9
Hydrogen Bond Acceptor Count
35
Rotatable Bond Count
19
Heavy Atom Count
89
Complexity
2050
Defined Atom Stereocenter Count
35
SMILES
CO[C@H]1[C@@H]([C@H]2[C@H](O[C@@H]1O[C@@H]3[C@H](O[C@@H]([C@H]([C@@H]3OC)OC)O[C@@H]4[C@H](O[C@@H]([C@H]([C@@H]4OC)OC)O[C@@H]5[C@H](O[C@@H]([C@H]([C@@H]5OC)OC)O[C@@H]6[C@H](O[C@@H]([C@H]([C@@H]6OC)OC)O[C@@H]7[C@H](O[C@@H]([C@H]([C@@H]7OC)OC)O[C@@H]8[C@H](O[C@H](O2)[C@H]([C@@H]8O)OC)CO)CO)CO)CO)CO)CO)CO)O
InChi Key
YZOUYRAONFXZSI-SBHWVFSVSA-N
InChi Code
InChI=1S/C54H94O35/c1-64-36-28(63)30-21(14-56)76-48(36)83-29-20(13-55)77-49(37(65-2)27(29)62)85-31-22(15-57)79-51(44(72-9)38(31)66-3)87-33-24(17-59)81-53(46(74-11)40(33)68-5)89-35-26(19-61)82-54(47(75-12)42(35)70-7)88-34-25(18-60)80-52(45(73-10)41(34)69-6)86-32-23(16-58)78-50(84-30)43(71-8)39(32)67-4/h20-63H,13-19H2,1-12H3/t20-,21-,22-,23-,24-,25-,26-,27-,28-,29-,30-,31-,32-,33-,34-,35-,36+,37+,38-,39-,40-,41-,42-,43+,44+,45+,46+,47+,48-,49-,50-,51-,52-,53-,54-/m1/s1
Chemical Name
(1S,3R,5R,6R,8R,10R,11R,13R,15R,16R,18R,20R,21R,23R,25R,26R,28R,30R,31S,33R,35R,36R,37S,38R,39S,40R,41S,42R,43S,44R,45S,46R,47S,48R,49S)-5,10,15,20,25,30,35-heptakis(hydroxymethyl)-37,39,40,41,42,43,44,45,46,47,48,49-dodecamethoxy-2,4,7,9,12,14,17,19,22,24,27,29,32,34-tetradecaoxaoctacyclo[31.2.2.23,6.28,11.213,16.218,21.223,26.228,31]nonatetracontane-36,38-diol
Synonyms
128446-36-6; Methyl-b-cyclodextrin; Methyl-; A-cyclodextrin; MFCD00074980;
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ≥ 100 mg/mL
H2O : ≥ 50 mg/mL
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 0.7673 mL 3.8364 mL 7.6728 mL
5 mM 0.1535 mL 0.7673 mL 1.5346 mL
10 mM 0.0767 mL 0.3836 mL 0.7673 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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