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HEX3

Cat No.:V29619 Purity: ≥98%
HEX3 is afragment of the adenoviral hexon which is the major capsid protein of adenovirion composed of three identical polypeptide chains.
HEX3
HEX3 Chemical Structure CAS No.: 688805-40-5
Product category: Peptides
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
5mg
10mg
25mg
Other Sizes
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Product Description
HEX3 is a fragment of the adenoviral hexon which is the major capsid protein of adenovirion composed of three identical polypeptide chains.


HEX3 (CAS#: 688805-40-5) is a peptide fragment of the adenoviral hexon, which is the major capsid protein of the adenovirus and is comprised of three identical polypeptide chains. The compound has a molecular formula of C47H78N12O14 and a molecular weight of 1035.21. HEX3 is a fragment of the adenoviral hexon protein and is used primarily as a research tool for studying adenovirus biology, capsid structure, and viral assembly. The compound also generally refers to beta-hexosaminidase 3 or its inhibitors, which are involved in glycolipid metabolism by catalyzing glycosidic bond hydrolysis and are used in research on neurodegenerative diseases.
Biological Activity I Assay Protocols (From Reference)
Targets
HEX3 targets the adenoviral hexon protein, which is the major capsid protein of the adenovirus. As a fragment of this protein, HEX3 is used to study the structure and function of the adenoviral capsid, including viral assembly, stability, and host cell interactions. In the context of beta-hexosaminidase 3, HEX3 targets enzymes involved in glycolipid metabolism by catalyzing the hydrolysis of glycosidic bonds. This makes HEX3 a valuable tool for studying neurodegenerative diseases where glycolipid metabolism is dysregulated.
ln Vitro
In vitro studies on HEX3 are primarily focused on its use as a research tool for studying adenovirus biology. As a fragment of the adenoviral hexon protein, HEX3 is used in biochemical assays to investigate protein-protein interactions, capsid assembly, and viral entry mechanisms. When referring to beta-hexosaminidase 3 inhibitors, HEX3 is used to modulate intracellular glycolipid levels in cell culture models of neurodegenerative diseases. However, specific in vitro activity data such as IC50 values are not widely available in the published literature for this compound.
ln Vivo
In vivo studies on HEX3 are limited, as the compound is primarily used as a research tool for in vitro applications. However, related research on adenoviral hexon fragments has been conducted in animal models to study adenovirus infection, immune responses, and vaccine development. The hEx3 diabody, which targets epidermal growth factor receptor and CD3, has been studied in mouse models for cancer immunotherapy, where it inhibited cancer growth more effectively than other formats. However, specific in vivo data for the HEX3 peptide fragment itself are not widely available.
Enzyme Assay
The in vitro binding assays for HEX3 typically involve studying protein-protein interactions between the hexon fragment and other viral or host proteins. These assays may use techniques such as surface plasmon resonance, isothermal titration calorimetry, or co-immunoprecipitation to measure binding affinity and specificity. For beta-hexosaminidase 3 inhibitors, enzyme activity assays are used to measure the inhibition of glycosidic bond hydrolysis. The compound is incubated with the target enzyme and a suitable substrate, and the reaction product is quantified using colorimetric or fluorometric detection methods.
Cell Assay
Cellular assays for HEX3 are typically conducted using cell lines infected with adenovirus or cell lines expressing adenoviral proteins. Cells are treated with HEX3 or related peptides, and the effects on viral replication, capsid assembly, or protein interactions are assessed. For beta-hexosaminidase 3 inhibitors, cells are treated with the compound and intracellular glycolipid levels are measured to assess the compound's activity. These cell-based assays help to characterize the compound's biological activity and its potential as a research tool for studying adenovirus biology or glycolipid metabolism.
Animal Protocol
In vivo animal studies for HEX3-related compounds have been conducted in mouse models. The hEx3 diabody, a bispecific antibody targeting epidermal growth factor receptor and CD3, has been studied in mice for cancer immunotherapy, where it inhibited cancer growth more effectively than other formats. In these studies, mice bearing tumors are treated with the compound, and tumor growth is monitored. However, specific in vivo protocols for the HEX3 peptide fragment itself have not been published. The compound is primarily used for in vitro research applications.
ADME/Pharmacokinetics
HEX3 has a molecular weight of 1035.21 and a molecular formula of C47H78N12O14. The compound appears as a white to off-white solid powder. For research use, HEX3 is typically stored as powder at -20degC for up to 3 years, and in solvent at -80degC for up to 1 year. The compound is soluble in appropriate solvents for biochemical and cell-based assays. Detailed pharmacokinetic parameters such as oral bioavailability, half-life, and tissue distribution have not been determined, as the compound is used primarily as a research tool rather than as a therapeutic agent.
Toxicity/Toxicokinetics
Toxicological data for HEX3 are limited, as the compound is primarily used as a research tool for in vitro applications. The compound has not been systematically evaluated for toxicity in preclinical studies. Standard safety precautions should be followed when handling the compound, including the use of appropriate personal protective equipment. The compound is for research use only and not for human or veterinary therapeutic use. Researchers should consult the Safety Data Sheet (SDS) for specific safety information.
Additional Infomation
HEX3 (CAS#: 688805-40-5) is a peptide fragment of the adenoviral hexon, the major capsid protein of the adenovirus. It has a molecular formula of C47H78N12O14 and a molecular weight of 1035.21. The compound is used primarily as a research tool for studying adenovirus biology, capsid structure, viral assembly, and protein-protein interactions. It also refers to beta-hexosaminidase 3 inhibitors used in research on neurodegenerative diseases. HEX3 is not approved for clinical use and is available only for research purposes.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C12H16O3
Molecular Weight
208.253643989563
Exact Mass
2182.134
CAS #
688805-40-5
PubChem CID
168009936
Appearance
White to off-white solid powder
Hydrogen Bond Donor Count
9
Hydrogen Bond Acceptor Count
20
Rotatable Bond Count
40
Heavy Atom Count
163
Complexity
3290
Defined Atom Stereocenter Count
0
SMILES
O1C(C)C2C=CC(=C(C=2C1CC)O)OC
InChi Key
GJYORAABHDCELF-UHFFFAOYSA-N
InChi Code
InChI=1S/C30H32N2O3.C30H31NO4.C29H32O2.C27H29NO3.C26H28N2O3/c1-20-8-9-22(14-15-30(3,19-33)29(34)35)16-24(20)11-10-23-6-5-7-27(21(23)2)25-12-13-26-18-32(4)31-28(26)17-25;1-19-8-9-22(14-15-30(4,18-32)29(33)34)16-24(19)11-10-23-6-5-7-26(20(23)2)25-12-13-27-28(17-25)35-21(3)31-27;1-5-29(4,28(30)31)19-18-23-15-14-21(2)26(20-23)17-16-24-12-9-13-27(22(24)3)25-10-7-6-8-11-25;1-19-9-10-21(13-14-27(3,18-29)26(30)31)16-23(19)12-11-22-6-4-8-25(20(22)2)24-7-5-15-28-17-24;1-18-7-8-20(11-12-26(3,17-29)25(30)31)15-22(18)10-9-21-5-4-6-23(19(21)2)24-16-27-13-14-28-24/h5-13,16-18,33H,14-15,19H2,1-4H3,(H,34,35);5-13,16-17,32H,14-15,18H2,1-4H3,(H,33,34);6-17,20H,5,18-19H2,1-4H3,(H,30,31);4-12,15-17,29H,13-14,18H2,1-3H3,(H,30,31);4-10,13-16,29H,11-12,17H2,1-3H3,(H,30,31)
Chemical Name
2-ethyl-2-methyl-4-[4-methyl-3-[2-(2-methyl-3-phenylphenyl)ethenyl]phenyl]butanoic acid;2-(hydroxymethyl)-2-methyl-4-[4-methyl-3-[2-[2-methyl-3-(2-methyl-1,3-benzoxazol-6-yl)phenyl]ethenyl]phenyl]butanoic acid;2-(hydroxymethyl)-2-methyl-4-[4-methyl-3-[2-[2-methyl-3-(2-methylindazol-6-yl)phenyl]ethenyl]phenyl]butanoic acid;2-(hydroxymethyl)-2-methyl-4-[4-methyl-3-[2-(2-methyl-3-pyrazin-2-ylphenyl)ethenyl]phenyl]butanoic acid;2-(hydroxymethyl)-2-methyl-4-[4-methyl-3-[2-(2-methyl-3-pyridin-3-ylphenyl)ethenyl]phenyl]butanoic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Note: Please store this product in a sealed and protected environment, avoid exposure to moisture.
Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 4.8019 mL 24.0096 mL 48.0192 mL
5 mM 0.9604 mL 4.8019 mL 9.6038 mL
10 mM 0.4802 mL 2.4010 mL 4.8019 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

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