yingweiwo

Hadacidin

Cat No.:V22046 Purity: ≥98%
Hadacidin is a potent inhibitor of AMP synthesis with anticancer activity.
Hadacidin
Hadacidin Chemical Structure CAS No.: 689-13-4
Product category: New12
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
100mg
250mg
500mg
1g
Other Sizes

Other Forms of Hadacidin:

  • Hadacidin sodium
Official Supplier of:
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Alternate Text
Top Publications Citing lnvivochem Products
Purity & Quality Control Documentation

Purity: ≥98%

Product Description
Hadacidin is a potent inhibitor of AMP synthesis with anticancer activity.
Hadacidin (CAS#: 689-13-4) is a competitive inhibitor of adenylate synthase (also known as adenylosuccinate synthetase). It is a naturally occurring compound produced by the strain Penicillium frequentans. Hadacidin functions as an analog of L-aspartate, binding to the active site of adenylate synthase and competitively inhibiting L-aspartate binding. This inhibition disrupts AMP synthesis and purine biosynthesis. The compound has been studied for its anticancer activity and its role in drug design for regulating adenylate synthase activity.
Biological Activity I Assay Protocols (From Reference)
Targets
Hadacidin primarily targets adenylosuccinate synthetase (AdSS), a key enzyme in the purine nucleotide biosynthesis pathway. It also targets purine nucleoside phosphorylase (PNP). By binding to the active site of adenylate synthase, it competitively inhibits the binding of the natural substrate L-aspartate. This action prevents the conversion of inosine monophosphate (IMP) to adenylosuccinate, a critical step in the de novo synthesis of adenine nucleotides.
ln Vitro
In vitro, hadacidin effectively inhibits adenylate synthase activity by competitively blocking L-aspartate binding. It has significant inhibitory effects on various human cancer cell lines, including human adenocarcinoma (HAD# 1), human epithelial carcinoma-3, and bronchial carcinoma-A42. The compound also inhibits adenosine and deoxyadenosine biosynthesis. Hadacidin and its analogs have demonstrated activity against adenylosuccinate synthetase and exhibit anticancer properties.
ln Vivo
In vivo, hadacidin has been studied for its anticancer activity. It operates as a metabolic inhibitor, specifically targeting enzyme-mediated reactions. The compound inhibits chloroplast formation in non-dividing, dark-grown Euglena cells, with the degree of inhibition proportional to the concentration in the medium. Its role in drug design extends to developing new inhibitors or activators to regulate adenylate synthase activity in the study of related diseases.
Enzyme Assay
Cell-free enzyme assays for hadacidin typically involve measuring adenylosuccinate synthetase activity in the presence of the inhibitor. The ability of hadacidin to bind to purified adenylosuccinate synthetase can be demonstrated using anion-exchange HPLC and [formyl-¹⁴C]hadacidin. The binding of radiolabeled hadacidin to the enzyme can be quantified by co-elution studies. These assays confirm the competitive nature of the inhibition with respect to L-aspartate.
Cell Assay
In vitro cellular assays for hadacidin involve treating cultured cancer cell lines with the compound to assess its antiproliferative effects. Cells are seeded in multi-well plates and exposed to various concentrations of hadacidin for a specified period. Cell viability is measured using standard assays such as MTT or CCK-8. The inhibition of AMP synthesis can be assessed by measuring nucleotide levels in treated cells. The compound's effects on cell growth and metabolism are then evaluated.
Animal Protocol
In vivo animal studies for hadacidin are less extensively documented. The compound has been studied for its effects on chloroplast formation in Euglena cells. For anticancer research, animal models bearing tumor xenografts could be used to evaluate the compound's in vivo efficacy. The compound would be administered via appropriate routes, and tumor growth inhibition would be monitored. However, specific protocols for mammalian in vivo studies are not widely available in the literature.
ADME/Pharmacokinetics
Hadacidin has a molecular weight of 119.08 and the formula C₃H₅NO₄. It is typically stored under recommended conditions as specified in the certificate of analysis. The compound is stable at room temperature for shipping within continental US. As a small molecule inhibitor of purine biosynthesis, its pharmacokinetic properties would be expected to include rapid absorption and distribution, with metabolism and excretion pathways typical of amino acid analogs.
References
Tibrewal N, Elliott GI. Evaluation of hadacidin analogues. Bioorg Med Chem Lett. 2011 Jan 1;21(1):517-9. doi: 10.1016/j.bmcl.2010.10.088. Epub 2010 Oct 30. PubMed PMID: 21129960.
Additional Infomation
Hadacidin is a monocarboxylic acid, a derivative of N-hydroxyglycine, in which the hydrogen atom bonded to the nitrogen atom is replaced by a formyl group. It was initially isolated from cultures of the common Penicillium frequentans. Hadacidin exhibits teratogenic, antitumor, and antibacterial effects, and also functions as a metabolite of Penicillium. It is a monocarboxylic acid, an N-hydroxy-α-amino acid, and an aldehyde compound.
Hadacidin is a controlled substance and may not be available for sale in certain territories. It is produced by Penicillium frequentans and has been used in drug design to help develop new inhibitors or activators to regulate adenylate synthase activity. The compound's mechanism involves N-oxygenation of glycine to yield N-hydroxyglycine followed by N-formylation to yield the hydroxamate. It has been studied as an inhibitor of adenine synthesis and is used in research on related diseases.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C3H5NO4
Molecular Weight
119.0761
Exact Mass
119.022
CAS #
689-13-4
Related CAS #
689-13-4 (free); 2618-22-6 (sodium);
PubChem CID
12717
Appearance
Typically exists as solid at room temperature
Density
1.592g/cm3
Boiling Point
367.1ºC at 760 mmHg
Flash Point
175.8ºC
Index of Refraction
1.526
LogP
-1.2
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
4
Rotatable Bond Count
2
Heavy Atom Count
8
Complexity
102
Defined Atom Stereocenter Count
0
SMILES
O=C(O)CN(O)C=O
InChi Key
URJHVPKUWOUENU-UHFFFAOYSA-N
InChi Code
InChI=1S/C3H5NO4/c5-2-4(8)1-3(6)7/h2,8H,1H2,(H,6,7)
Chemical Name
2-[formyl(hydroxy)amino]acetic acid
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
May dissolve in DMSO (in most cases), if not, try other solvents such as H2O, Ethanol, or DMF with a minute amount of products to avoid loss of samples
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
View More

Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
View More

Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 8.3977 mL 41.9886 mL 83.9772 mL
5 mM 1.6795 mL 8.3977 mL 16.7954 mL
10 mM 0.8398 mL 4.1989 mL 8.3977 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

Calculator

Molarity Calculator allows you to calculate the mass, volume, and/or concentration required for a solution, as detailed below:

  • Calculate the Mass of a compound required to prepare a solution of known volume and concentration
  • Calculate the Volume of solution required to dissolve a compound of known mass to a desired concentration
  • Calculate the Concentration of a solution resulting from a known mass of compound in a specific volume
An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
  • Enter 350.26 in the Molecular Weight (MW) box
  • Enter 10 in the Concentration box and choose the correct unit (mM)
  • Enter 5 in the Volume box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
  • Enter 10 into the Concentration (Start) box and choose the correct unit (mM)
  • Enter 25 into the Concentration (End) box and select the correct unit (mM)
  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
  • Click the “Calculate” button
  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
g/mol

Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
  • To calculate molar mass of a chemical compound, please enter the chemical/molecular formula and click the “Calculate’ button.
Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
/

Reconstitution Calculator allows you to calculate the volume of solvent required to reconstitute your vial.

  • Enter the mass of the reagent and the desired reconstitution concentration as well as the correct units
  • Click the “Calculate” button
  • The answer appears in the Volume (to add to vial) box
In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
+
+
+

Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Contact Us