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Migoprotafib (GDC-1971) HCl

Alias: Migoprotafib; GDC-1971; GDC 1971; GDC1971; 2377352-49-1; RG6433; ABR1HZ0ZG8; .
Cat No.:V42126 Purity: ≥98%
Migoprotafib (GDC-1971) (compound 199) is an inhibitor (blocker/antagonist) of SHP2.
Migoprotafib (GDC-1971) HCl
Migoprotafib (GDC-1971) HCl Chemical Structure CAS No.: 2377352-49-1
Product category: New2
This product is for research use only, not for human use. We do not sell to patients.
Size Price Stock Qty
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Product Description
Migoprotafib (GDC-1971) (compound 199) is an inhibitor (blocker/antagonist) of SHP2.
Migoprotafib (GDC-1971, also known as RLY-1971) is a potent, selective, allosteric, and orally bioavailable inhibitor of the non-receptor protein tyrosine phosphatase SHP2 (encoded by PTPN11). It is being developed for the treatment of advanced solid tumors driven by receptor tyrosine kinase (RTK) and RAS pathway alterations. Migoprotafib inhibits both wild-type SHP2 (IC50 <1 nM) and the E76K activating mutant (IC50 <250 nM) in biochemical assays. Its molecular formula is C25H26N8O with a molecular weight of 454.53 g/mol.
Biological Activity I Assay Protocols (From Reference)
Targets
Migoprotafib targets SHP2 (Src Homology-2 Domain-Containing Phosphatase 2), a non-receptor protein tyrosine phosphatase that plays a critical role in the RAS/MAPK signaling pathway. SHP2 acts as a key node connecting RTK signaling to downstream RAS activation. Migoprotafib binds and stabilizes SHP2 in its inactive conformation, thereby blocking its phosphatase activity and inhibiting downstream RAS/MAPK pathway signaling. This allosteric mechanism provides selectivity over other phosphatases.
ln Vitro
In vitro, Migoprotafib potently inhibits cellular proliferation in models harboring RTK, SHP2, NF1, KRAS, or BRAF mutations in a dose-dependent manner. It potently inhibits the proliferation of cellular models harboring KRAS G12C or G12A mutations with a median IC50 <80 nM, compared to models harboring other KRAS mutations with a median IC50 >1 µM. It demonstrates increased suppression of MAPK signaling and anti-proliferation synergy when combined with EGFR, ALK, and KRAS G12C inhibitors.
ln Vivo
In vivo, Migoprotafib demonstrates dose-dependent RAS/MAPK pathway inhibition and induces significant tumor growth inhibition in human xenograft models harboring EGFR and KRAS alterations. It exhibits dramatic synergistic anti-tumor growth effects when combined with the KRAS G12C covalent inhibitor GDC-6036. The compound is orally bioavailable. These in vivo efficacy data support its clinical development for RTK/RAS-driven cancers.
Enzyme Assay
For SHP2 biochemical assays, recombinant wild-type or mutant SHP2 protein is incubated with a fluorogenic phosphatase substrate (such as 6,8-difluoro-4-methylumbelliferyl phosphate, DiFMUP) in assay buffer at room temperature. The test compound is added at various concentrations (typically 0.001-10 µM). Fluorescence is measured at excitation 360 nm and emission 460 nm over time to determine initial reaction rates. IC50 values are calculated by fitting dose-response curves.
Cell Assay
For cell proliferation assays, cancer cell lines harboring various RTK, SHP2, NF1, KRAS, or BRAF mutations are seeded in 96-well plates and treated with Migoprotafib at concentrations ranging from 0.001-10 µM for 72-96 hours. Cell viability is assessed using CellTiter-Glo or MTT assays. IC50 values are calculated from dose-response curves. For combination studies, cells are treated with Migoprotafib plus EGFR, ALK, or KRAS G12C inhibitors, and synergy is assessed using the Bliss independence or Chou-Talalay methods.
Animal Protocol
For in vivo efficacy studies, immunodeficient mice are subcutaneously implanted with human tumor xenografts harboring EGFR or KRAS alterations. When tumors reach approximately 100-200 mm³, mice are randomized and treated orally with Migoprotafib at doses determined from PK studies. Tumor volumes are measured twice weekly. At study endpoint, tumors are collected for Western blot analysis of phospho-ERK and other MAPK pathway markers to confirm target inhibition. Combination studies with KRAS G12C inhibitors are performed to evaluate synergy in vivo.
ADME/Pharmacokinetics
Migoprotafib is orally bioavailable. It shows favorable pharmacokinetic properties suitable for once-daily oral dosing. The compound is soluble in DMSO at 10 mM. Powdered form can be stored at -20°C for 12 months and at 4°C for 6 months; solutions can be stored at -80°C for 6 months or -20°C for 6 months. Further detailed PK parameters (half-life, Cmax, AUC, protein binding) would be available in the primary literature.
Toxicity/Toxicokinetics
Toxicology data for Migoprotafib would be detailed in preclinical and clinical study reports. As a clinical-stage compound, it has undergone extensive safety evaluation. Common adverse effects associated with SHP2 inhibition may include gastrointestinal disturbances, fatigue, and potential effects on hematopoiesis given the role of SHP2 in cytokine signaling. Specific toxicity data are proprietary and would be available in regulatory submissions and clinical trial disclosures.
References

[1]. Shp2 phosphatase inhibitors and methods of use thereof. Patent WO2019183367A1.

Additional Infomation
Migoprotafib (GDC-1971) is a potent, selective, allosteric, orally bioavailable SHP2 inhibitor that is under clinical investigation for the treatment of advanced solid tumors. It inhibits wild-type SHP2 with IC50 <1 nM and E76K mutant with IC50 <250 nM. The compound blocks RAS/MAPK signaling and shows synergy with EGFR, ALK, and KRAS G12C inhibitors. It has demonstrated significant tumor growth inhibition in xenograft models harboring EGFR and KRAS alterations. Migoprotafib is a clinical-stage investigational drug and is not yet approved for therapeutic use.
These protocols are for reference only. InvivoChem does not independently validate these methods.
Physicochemical Properties
Molecular Formula
C25H26N8O
Molecular Weight
454.53
Exact Mass
454.222
CAS #
2377352-49-1
PubChem CID
139512018
Appearance
Light yellow to yellow solid powder
LogP
2.4
Hydrogen Bond Donor Count
2
Hydrogen Bond Acceptor Count
8
Rotatable Bond Count
2
Heavy Atom Count
34
Complexity
732
Defined Atom Stereocenter Count
1
SMILES
C1=CC2OC3(CCN(C4NC5C(C(N6CCCC7C6=CC=CN=7)=NN=5)=NC=4)CC3)[C@H](N)C=2C=C1
InChi Key
RGCGBFIARQENML-JOCHJYFZSA-N
InChi Code
InChI=1S/C25H26N8O/c26-22-16-5-1-2-8-19(16)34-25(22)9-13-32(14-10-25)20-15-28-21-23(29-20)30-31-24(21)33-12-4-6-17-18(33)7-3-11-27-17/h1-3,5,7-8,11,15,22H,4,6,9-10,12-14,26H2,(H,29,30,31)/t22-/m1/s1
Chemical Name
(3R)-1'-[3-(3,4-dihydro-2H-1,5-naphthyridin-1-yl)-1H-pyrazolo[3,4-b]pyrazin-6-yl]spiro[3H-1-benzofuran-2,4'-piperidine]-3-amine
Synonyms
Migoprotafib; GDC-1971; GDC 1971; GDC1971; 2377352-49-1; RG6433; ABR1HZ0ZG8; .
HS Tariff Code
2934.99.9001
Storage

Powder      -20°C    3 years

                     4°C     2 years

In solvent   -80°C    6 months

                  -20°C    1 month

Shipping Condition
Room temperature (This product is stable at ambient temperature for a few days during ordinary shipping and time spent in Customs)
Solubility Data
Solubility (In Vitro)
DMSO : ~100 mg/mL (~220.01 mM)
Solubility (In Vivo)
Note: Listed below are some common formulations that may be used to formulate products with low water solubility (e.g. < 1 mg/mL), you may test these formulations using a minute amount of products to avoid loss of samples.

Injection Formulations
(e.g. IP/IV/IM/SC)
Injection Formulation 1: DMSO : Tween 80: Saline = 10 : 5 : 85 (i.e. 100 μL DMSO stock solution 50 μL Tween 80 850 μL Saline)
*Preparation of saline: Dissolve 0.9 g of sodium chloride in 100 mL ddH ₂ O to obtain a clear solution.
Injection Formulation 2: DMSO : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL DMSO 400 μLPEG300 50 μL Tween 80 450 μL Saline)
Injection Formulation 3: DMSO : Corn oil = 10 : 90 (i.e. 100 μL DMSO 900 μL Corn oil)
Example: Take the Injection Formulation 3 (DMSO : Corn oil = 10 : 90) as an example, if 1 mL of 2.5 mg/mL working solution is to be prepared, you can take 100 μL 25 mg/mL DMSO stock solution and add to 900 μL corn oil, mix well to obtain a clear or suspension solution (2.5 mg/mL, ready for use in animals).
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Injection Formulation 4: DMSO : 20% SBE-β-CD in saline = 10 : 90 [i.e. 100 μL DMSO 900 μL (20% SBE-β-CD in saline)]
*Preparation of 20% SBE-β-CD in Saline (4°C,1 week): Dissolve 2 g SBE-β-CD in 10 mL saline to obtain a clear solution.
Injection Formulation 5: 2-Hydroxypropyl-β-cyclodextrin : Saline = 50 : 50 (i.e. 500 μL 2-Hydroxypropyl-β-cyclodextrin 500 μL Saline)
Injection Formulation 6: DMSO : PEG300 : castor oil : Saline = 5 : 10 : 20 : 65 (i.e. 50 μL DMSO 100 μLPEG300 200 μL castor oil 650 μL Saline)
Injection Formulation 7: Ethanol : Cremophor : Saline = 10: 10 : 80 (i.e. 100 μL Ethanol 100 μL Cremophor 800 μL Saline)
Injection Formulation 8: Dissolve in Cremophor/Ethanol (50 : 50), then diluted by Saline
Injection Formulation 9: EtOH : Corn oil = 10 : 90 (i.e. 100 μL EtOH 900 μL Corn oil)
Injection Formulation 10: EtOH : PEG300Tween 80 : Saline = 10 : 40 : 5 : 45 (i.e. 100 μL EtOH 400 μLPEG300 50 μL Tween 80 450 μL Saline)


Oral Formulations
Oral Formulation 1: Suspend in 0.5% CMC Na (carboxymethylcellulose sodium)
Oral Formulation 2: Suspend in 0.5% Carboxymethyl cellulose
Example: Take the Oral Formulation 1 (Suspend in 0.5% CMC Na) as an example, if 100 mL of 2.5 mg/mL working solution is to be prepared, you can first prepare 0.5% CMC Na solution by measuring 0.5 g CMC Na and dissolve it in 100 mL ddH2O to obtain a clear solution; then add 250 mg of the product to 100 mL 0.5% CMC Na solution, to make the suspension solution (2.5 mg/mL, ready for use in animals).
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Oral Formulation 3: Dissolved in PEG400
Oral Formulation 4: Suspend in 0.2% Carboxymethyl cellulose
Oral Formulation 5: Dissolve in 0.25% Tween 80 and 0.5% Carboxymethyl cellulose
Oral Formulation 6: Mixing with food powders


Note: Please be aware that the above formulations are for reference only. InvivoChem strongly recommends customers to read literature methods/protocols carefully before determining which formulation you should use for in vivo studies, as different compounds have different solubility properties and have to be formulated differently.

 (Please use freshly prepared in vivo formulations for optimal results.)
Preparing Stock Solutions 1 mg 5 mg 10 mg
1 mM 2.2001 mL 11.0004 mL 22.0007 mL
5 mM 0.4400 mL 2.2001 mL 4.4001 mL
10 mM 0.2200 mL 1.1000 mL 2.2001 mL

*Note: Please select an appropriate solvent for the preparation of stock solution based on your experiment needs. For most products, DMSO can be used for preparing stock solutions (e.g. 5 mM, 10 mM, or 20 mM concentration); some products with high aqueous solubility may be dissolved in water directly. Solubility information is available at the above Solubility Data section. Once the stock solution is prepared, aliquot it to routine usage volumes and store at -20°C or -80°C. Avoid repeated freeze and thaw cycles.

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An example of molarity calculation using the molarity calculator is shown below:
What is the mass of compound required to make a 10 mM stock solution in 5 ml of DMSO given that the molecular weight of the compound is 350.26 g/mol?
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  • The answer of 17.513 mg appears in the Mass box. In a similar way, you may calculate the volume and concentration.

Dilution Calculator allows you to calculate how to dilute a stock solution of known concentrations. For example, you may Enter C1, C2 & V2 to calculate V1, as detailed below:

What volume of a given 10 mM stock solution is required to make 25 ml of a 25 μM solution?
Using the equation C1V1 = C2V2, where C1=10 mM, C2=25 μM, V2=25 ml and V1 is the unknown:
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  • Enter 25 into the Volume (End) box and choose the correct unit (mL)
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  • The answer of 62.5 μL (0.1 ml) appears in the Volume (Start) box
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Molecular Weight Calculator allows you to calculate the molar mass and elemental composition of a compound, as detailed below:

Note: Chemical formula is case sensitive: C12H18N3O4  c12h18n3o4
Instructions to calculate molar mass (molecular weight) of a chemical compound:
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Definitions of molecular mass, molecular weight, molar mass and molar weight:
  • Molecular mass (or molecular weight) is the mass of one molecule of a substance and is expressed in the unified atomic mass units (u). (1 u is equal to 1/12 the mass of one atom of carbon-12)
  • Molar mass (molar weight) is the mass of one mole of a substance and is expressed in g/mol.
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In vivo Formulation Calculator (Clear solution)
Step 1: Enter information below (Recommended: An additional animal to make allowance for loss during the experiment)
Step 2: Enter in vivo formulation (This is only a calculator, not the exact formulation for a specific product. Please contact us first if there is no in vivo formulation in the solubility section.)
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Calculation results

Working concentration mg/mL;

Method for preparing DMSO stock solution mg drug pre-dissolved in μL DMSO (stock solution concentration mg/mL). Please contact us first if the concentration exceeds the DMSO solubility of the batch of drug.

Method for preparing in vivo formulation:Take μL DMSO stock solution, next add μL PEG300, mix and clarify, next addμL Tween 80, mix and clarify, next add μL ddH2O,mix and clarify.

(1) Please be sure that the solution is clear before the addition of next solvent. Dissolution methods like vortex, ultrasound or warming and heat may be used to aid dissolving.
             (2) Be sure to add the solvent(s) in order.

Clinical Trial Information
A Phase 1, Open-Label, Dose Escalation and Expansion Study of Migoprotafib (GDC-1971, RLY-1971), a Highly Potent and Selective SHP2 Inhibitor, in Subjects With Advanced or Metastatic Solid Tumors
CTID: NCT04252339
Phase: Phase 1a
Status: Completed
Date: 2020-02-03
A Phase 1b Open-Label Study to Evaluate Safety, Pharmacokinetics and Antitumor Activity of Migoprotafib (GDC-1971) Combined With Divarasib (GDC-6036) in Participants With KRAS G12C-Mutated Non-Small Cell Lung Cancer
CTID: NCT04449874
Phase: Phase 1b
Status: Active, Not Recruiting
Date: 2020-06-24
A Phase 1b, Open-Label Study Evaluating the Safety, Pharmacokinetics, and Activity of Migoprotafib (GDC-1971) in Combination With Atezolizumab in Patients With Locally Advanced or Metastatic Solid Tumors
CTID: NCT05487235
Phase: Phase 1b
Status: Active, Not Recruiting
Date: 2022-07-11
A Phase Ib Study to Evaluate the Safety, Pharmacokinetics, and Activity of Migoprotafib (GDC-1971) in Combination With Either Osimertinib in Patients With Unresectable, Locally Advanced, or Metastatic Non-Small Cell Lung Cancer, or With Cetuximab in Patients With Metastatic Colorectal Cancer
CTID: NCT05954871
Phase: Phase 1b
Status: Completed
Date: 2023-05-22
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